Xiphias gladius (swordfish): 120798482
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Entry
120798482 CDS
T07311
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b isoform X1
KO
K05636
laminin, beta 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120798482 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120798482 (lamb1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
120798482
NCBI-ProteinID:
XP_039998675
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All DBs
Position
LG2:4357715..4390317
Genome browser
AA seq
1785 aa
AA seq
DB search
MSLIIRILTTLVFLPAALWCPAAAQVPEFADVCTEGSCYPATGDLLIGRAHKLTASSTCG
MGQPERFCIVGHLEEEKKCFACDSRRTYDEDSNTVSHTIENVVTTFAHNRLKTWWQSENG
VENVTIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCQASFPGV
SSGPVVKVDDIICDSRYSDIEPSTEGEVILRVLDPAFEIEDPYSLRIQNMLKITNLRVKF
IKLHTLGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMEGAPAGAEGMVHGR
CVCNHNTEGLNCERCQDFYHDLPWRPAEGRNTNACKRCECNRHASSCHFDLAVYMATGNT
SGGVCDDCQHNTVGRQCEQCAAFYYQHPNRNLRDPNVCEPCNCDPDGSLQSGLCDSRTDV
AAGLISGQCRCKVNVEGERCDHCKHGHYGLGQGPQGCLPCTCNPLGTLPGGNSCDTDSGK
CFCKRLVDGHNCDQCLPQHWGLSNDMDGCRPCDCDQGGAVHNNCDPHSGQCVCREHMFGR
RCDQVESGFYFITLDHYTYEAEDAKHGPGVTVVQRPYPLDRSPTWTGMGFVNVPEGAYLE
FTIDNIPESMDYDILIRYEPQLPEQWEKVNIRVQRPVFHPPNYSGHCSNAIQSGDEQSIS
LPPGSRHVLLVRPVCFEKGLNYTIRLSLPLYSSISDIQSPYTLIDSLVLMPRVRELDMFH
GTDGEGAWDTFQRYRCLESSQSVVKSPMTDICNDYIFSVSALLHKGAMACQCDPQGSLST
VCESSGGQCRCRPNVVGRNCDHCAPATFLFSPSGCRPCECDPQGSVSAFCHEATGQCECV
PGASGRQCSHCLPGFWGFPQCRPCHCNGHSEYCNPQTGACQGCRDFTTGHHCERCLDGYH
GDPELGSGSHCRPCMCPDGPRSGRQFSDSCYLLDYTNQLVCVCSPGYKGARCDECAPGHF
GNPLVPGGRCAPCQCNSNIDMHDPGSCDARTGACLKCLHHTDGYRCQHCKLGYYGKAATQ
SCRKCMCYPAGTEPQACSSPDECQCDQHTGQCPCQPNVVGQNCDRCAADTWNITSGTGCQ
HCDCDPTHSFGSSCNEVTGQCSCKPGFGGRTCRECRELFWGDPEVKCHACDCDPRGISSE
QCHRATGQCTCVEGVSGPRCDKCARGYQGEFPVCEPCHQCFAIWDTVVGELTHQTRRLEA
QMTELQTSGVTVPYKELISSLERNSEAVREIVESNPAAVKLEQIEDLMYQIIGLMSHLNG
NLNTTEETLNLLLDDANSTHVNLSALTDEAKQLELSVQELRQQVYNAKNANIQGAMDTIA
AAHMQSEMAELNANASTSDPRNTVEQSATVRKATEDKLSSGQKEFDRKHQRNLQKMDKLS
NELDNVDLSPLSEKTCGGAAEGDGCSGSPCGGLGCVGEDGAPRCGGEGCEGLVTTSQTAL
KSAKDLDQEILAAMQEVDKLSRMVWEANVHANEAKTNALEVLAKSNQSKVRVEQSNEQLR
NLIKEIRDLLTNDKADVSVIEMVANEVMALEMPTSTEKLQELTREIREKVGGLTSVEAIL
SQSAEDIQAAEALLRQAKAASEQAANIRETADAAKAALDEAERAQTIAMDAIQLAQNNTR
GTLDLLTSVESETASSELKLSNTTGRLVHLEREVGLLRQNNLEVNRLAETADWITDQAKE
DAEEAQQEFEVEVKDRLEEVTDLVEDKGESVLQARRKADELQQEAKELLTQSSSKLQRLG
ELESSYEANQRLLEAKAAELAELERTVRQILEEISHKVTLYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcataatccgcattctgacaactctggttttcctccccgcagccctgtggtgt
cctgccgcggcgcaggtgccggagtttgcggatgtctgcaccgagggcagctgctacccc
gccacaggcgacctgctgatcggccgggcgcacaaactcaccgcgtcctccacctgcgga
atggggcagccggagcgcttctgcatcgtcgggcatctggaggaggagaagaagtgcttc
gcgtgcgactccaggcggacgtacgacgaggacagcaacaccgtcagccacaccatcgag
aacgtggtcaccaccttcgcccacaaccgcctcaaaacctggtggcagtcggagaacggt
gtggagaatgtcaccatccagctggacctggaggccgagtttcacttcacacacctcatc
atgaccttcaagacgtttcgtccggctgccatggtgatcgagcggtctatggacttcggg
aagacgtggcaggtttatcgttatttcgcctacgactgtcaggcctcattccccggggtg
tcctccgggcccgtggtcaaagtggacgacatcatctgcgactcccgttactcagacatc
gaaccgtccaccgagggagaggtgatattacgggttctggaccccgccttcgagatcgag
gacccctacagcttgaggatacagaacatgctgaagatcaccaacctgcgggtgaagttc
atcaagctccacacgctgggcgacaacctgctcgactcccgcgacgaggtgacggagaag
tactactacgccctctacgatatggttgtccgcgggaactgcttctgctacggtcacgcc
tccgagtgcgcgccgatggagggcgccccggcaggagctgagggcatggtccacggccgc
tgtgtgtgcaatcacaacaccgaggggctgaactgcgagcgctgccaagacttttaccac
gatttgccttggagaccggcagagggacgaaacaccaacgcctgcaagaggtgcgagtgt
aaccggcacgccagctcgtgccacttcgacctggccgtgtacatggcgaccggcaacacg
agcggaggcgtgtgcgacgactgtcaacacaacacggtgggccgacagtgcgagcagtgc
gcagctttctactaccagcaccccaacagaaacctgagggaccccaacgtgtgtgaaccg
tgtaactgtgacccagacggatctctgcagagcggactgtgtgactcacggaccgatgtg
gcagccgggctgatctcaggccagtgtcggtgcaaagtcaacgtggagggcgagcgctgc
gaccactgcaaacacggacactacgggctgggacaggggcctcagggctgtctgccttgt
acctgtaacccactgggcactctgccgggaggaaactcctgtgatacagactcaggaaag
tgcttctgcaaacgcctcgttgacggacacaactgcgatcagtgtctgccacagcactgg
ggtctgtccaatgacatggatggctgcagaccatgtgactgtgaccagggcggggctgtt
cacaataactgcgaccctcactcgggccagtgtgtgtgcagggagcacatgttcggacgc
cgctgcgatcaggtcgagtccggcttctacttcatcactctggatcactacacctacgag
gccgaggacgccaagcacggaccgggtgtgacagtggtacagaggccttatcctctggat
cgcagtcccacgtggaccggtatgggttttgttaacgtgccagaaggagcctacttagag
ttcaccatcgacaacatcccagagtccatggactatgacatccttattcgctatgaaccg
cagctgccagagcagtgggagaaggtgaacatcagagtgcagcgtcccgtcttccaccct
ccaaactactctggccactgcagcaacgccatccagagtggagacgagcagtccatctcc
cttccacctggatccagacatgtgctgctggtgaggccggtgtgtttcgagaaaggactg
aactacacgatccggctgagtctgccgctctactcgtcaatcagcgacatccagagcccg
tacacactcatcgactccttggtgctgatgccccgggtcagggagctggacatgttccat
gggaccgatggcgaaggagcgtgggatacgttccagcgctaccggtgtctggagagcagc
cagagcgtcgtaaaaagccccatgaccgacatctgtaacgactacatcttcagtgtctct
gctctgctgcacaaaggagccatggcatgccagtgtgacccacagggttcgctcagcact
gtgtgtgagtccagcgggggtcagtgtcggtgtcgacccaatgtcgtcggcaggaactgt
gaccactgcgccccggctacgttcctgttcagcccctccggctgcagaccctgcgagtgt
gaccctcagggctcggtcagcgccttctgccacgaggcgaccggccagtgcgagtgcgtc
cccggggcctcgggtcgccagtgttcccactgcctgccgggcttctggggcttccctcag
tgccgaccctgccattgcaacggccacagcgagtactgcaaccctcagaccggagcgtgt
cagggctgcagagacttcaccaccggacaccactgtgagaggtgtctggacggttaccat
ggggacccagagctgggttcaggtagccactgtcgcccctgtatgtgccccgacggaccc
cgcagcggacgccagttttctgacagctgttaccttctggattacactaaccagctggtg
tgcgtgtgcagccccggctacaaaggtgccaggtgcgatgagtgcgcccccggtcacttc
gggaaccctctggtgcccggtgggcgctgcgcgccctgccagtgtaacagcaacatcgac
atgcacgacccggggtcctgtgacgcccggacgggtgcctgtctcaaatgcctgcaccac
accgatggctacaggtgccagcattgcaaactgggttactacggcaaggctgccacacag
agctgcaggaagtgtatgtgttacccagcgggcacggaacctcaggcctgttcatccccg
gatgagtgccagtgcgaccagcacaccggtcagtgtccctgccagccgaacgtggtgggt
cagaactgcgaccgctgtgccgccgacacgtggaacatcaccagcgggacgggctgccag
cactgcgactgcgaccccacccactccttcggctcctcctgcaatgaggtcacaggacag
tgctcgtgcaagcccggttttggtggcaggacgtgtcgggagtgcagggagctcttctgg
ggggatccagaagttaaatgccacgcatgtgactgcgaccctcggggaatctccagcgag
cagtgccatcgtgccacaggtcagtgtacctgtgtggagggtgtttccggcccacggtgt
gacaaatgcgccagaggctaccagggggagttccccgtctgtgaaccctgccaccagtgc
ttcgcaatctgggacaccgtggtcggcgagctgacccatcaaactcgacgtctggaggcc
caaatgacagagctccagaccagcggggtgacggtgccgtataaagagttaatcagcagt
ctggagagaaactccgaggctgtcagagaaatagttgagagcaaccctgcagcagtgaag
ctggagcagatagaggacctaatgtaccagatcattggtttgatgtcccacctcaatgga
aatctgaacacgacggaggagaccttgaaccttctcctcgatgatgccaactccacccat
gtaaacttgagcgccctgacggatgaggccaaacagctggagctgagcgtccaggaactg
agacagcaggtgtacaatgcaaagaacgccaacatccagggtgccatggacaccatcgca
gcggcacacatgcagtctgagatggcggagctcaacgccaacgcctccaccagtgatccc
agaaacacagtggagcagtccgccacggtgcggaaagccaccgaggacaaacttagcagc
ggccagaaggagtttgaccgcaagcaccaaagaaacttgcagaagatggacaaactgtcc
aacgagctagataacgttgacctgtcaccacttagcgagaagacatgcggtggtgcagct
gaaggtgacggctgctctggctccccctgcggcgggttgggttgtgtcggcgaggacggc
gctccccggtgtgggggagaaggatgtgaaggcctcgtcactacctcccaaactgccctc
aaatcagccaaggacctggaccaggagatcctagcggctatgcaggaggtggacaagctc
tccaggatggtgtgggaggccaatgtccacgcaaacgaggccaagacgaacgcgctggag
gtgctggccaaatccaaccagagcaaagtgagggtggagcagagcaacgagcagctccgc
aacctcatcaaagagatacgagacctcctcaccaacgacaaggcagatgtttcggtgatc
gagatggtggccaacgaggtgatggctctggagatgccgacctcgacggagaagctgcag
gagctgacgagggagatcagggaaaaggtcggcggtctgaccagcgtggaggccatcctg
agtcagagcgccgaggacatccaggccgccgaggctctgctgcggcaggccaaggctgcc
agtgagcaggcggccaacataagggagacggcagacgcagcgaaggcagccctggatgag
gccgagcgtgctcagactatcgccatggacgccatccaactggcccagaacaacaccagg
ggcaccctggacctgctgacctctgtggagtctgagacggcctcgtcggagctgaagctc
agtaacaccacgggtcgtctggttcacctggagagggaggtcggcctgctgagacagaac
aacctggaggtgaaccggctggcagagacggccgactggatcaccgaccaggccaaagag
gacgcagaggaggcccagcaggagtttgaggtggaggtgaaagatagactcgaggaggtg
acggacctggtggaggataaaggggagtcggtgctgcaggcgaggaggaaagcggatgaa
ctgcagcaggaggccaaagagctgctcacccagagcagcagcaagctgcagagactcgga
gaactggagagctcctacgaggccaaccagcgcctcctggaggccaaagctgcagagctg
gccgagctggagcgaaccgtccgccagatcctggaggagatcagccacaaggtgacgctg
tacagcacctgtctgtga
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