Xiphias gladius (swordfish): 120798511
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Entry
120798511 CDS
T07311
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04144
Endocytosis
xgl04517
IgSF CAM signaling
xgl04520
Adherens junction
xgl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120798511
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120798511
09144 Cellular community - eukaryotes
04520 Adherens junction
120798511
04530 Tight junction
120798511
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120798511
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120798511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120798511
NCBI-ProteinID:
XP_039998732
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Position
LG14
Genome browser
AA seq
1436 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRTCRRPGPGREGRMKELILSASLIAVYDEQEPHHGGDGTSASSTGTQ
SPDLFAADLSAGSGASAFQPYQAASEIEVTPSALRTNMPLHVRRSSDPALLTITGPFSGG
DSRVPTEETPSRKNPTRWSTTAGFLKARQSSGTNSLERKGKGMETYRSLPRDAGTWANQR
EFQRETARSSLSANHPMVDRWLERQEQEEEAREEENGRIEPLGRADSCIDHTPVRSLEDI
VKLVEVTNDGGPLGIHVVPFSGRDRRTLGLLVKRLERGGKAEQQGLFQENDCIVRINNGD
LRNIRFEQAQNMFRQAMRSPVIMFHVVPSSMKAHYEQLSHAERNPAYASGRFSPDSLTGS
TVSGMDHTPHRMSRHGSQKHQHSHPHPHSDAHLDPTDGYPPLTHPAVSAAKPPTGHTHSP
QRGANSTPTVGYTKKVGRRLNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAI
QDGRLKAGDRLLEVNGVDLNGRTQEEVVSLLRATPMGGAVGLLVLRQEDAFLPREVNAEP
QVQCPRDSHPRQPVIAGKPHWLIEKTEEDELVLTPDGTREFLTFEIPLSDSGSAGLGVSV
KGNRSKENHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQDAMETLRKS
MSTEGNKRGMIQLIVARRVAKRNEETPGSPLGPQQTTNTSLDDHERRISHSLYGGLEGLD
DNLMPRQGMMPRTIGNYQLSPTVNMPQNDIVIIEDDRPPLLPPHLSDQSSSSSHDDVGFT
ADMTPPWAKELPSHDSSLAPDENHPDSAFQREGFGRQSMSEKRTKQFGDAAQLEIIKTRK
SKSMDLVADEINLTPRPEINTGSSTKDVGPSLGLKKSSSLESLQTAVAEVTLNGDLPFHR
PRPRIIRGRGCNESFRAAIDKSYDRPAATEDDDEGMETLEEDTEESSRSGRDSVSTMADQ
TPLSGTEKPLVNGTNRAKDEKRKDKDKGGKEKKKQEGGKEKEKGKAKKGMLKGLGDMFRF
GKHRKDERLGEKMDRKGSSKWRPEEMQVSEEDTMKMRMEQERIQAKTRELRERQARERDY
AEILDISRTPERSSEEEHPYAGINPLNSSVDSGHSRPQSPRDDYPHIHPHHQHQHSDTLY
TQVSKARNDRPPSADSNRLAPSNHDRIQRLRQEFQQAQNIPDDPDDRRRTYSFEQPWSNT
SSNGPGGYSQPGRHSVSVEVQMQRQRQEERDSFAQAQRQYSSLPRQPRKNPSSISQDSWD
KAYPPGEGFQTAKDNPRYSSYQGSRNGYPGGGGVNARVLLEAQELLRQEQRRREQEAKGK
LMQESTGNSSYEGYSTAHLKDPASPKGPYRQDVPPSPSQLARLNRLGSEKGRLFYS
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacggtgtgttttggcaggacccgggtggtggtgccgtgcggggatggaaac
ataaaagtgcacacgctcatccagcaggctgtcatgcgatacaagaaggctatagccaag
gatgctagttactggctgcaggtgcatcggttggaacacggtgacggcggcatcctcgac
ctggatgacgtgctttgcgatgtggccgatgacaaagacaggacgtgtcgtagacctggc
ccgggaagagagggacggatgaaggagttgatcttgagtgccagtttgatagccgtgtat
gacgaacaggaaccccatcatggaggtgatggcaccagtgccagctccacggggactcag
agccccgacctgtttgctgcagacctcagtgccggcagtggagcctcagccttccaaccc
taccaggctgccagcgagatcgaggttacgccctccgccttgcgcaccaatatgcccctc
cacgtccggcgcagcagcgaccccgccctgctgaccatcaccgggccgtttagcggcggc
gattcacgggttccgacggaagagacgccatcgaggaagaacccaacccgctggtcgacc
accgccggcttcctgaaagctcgccaatcctccggcaccaacagcctagagaggaagggt
aaaggcatggaaacgtatcgcagcctgccgcgagatgccgggacatgggccaatcagaga
gaatttcagagagagacggcgcggtcgtctctcagtgcgaatcaccccatggtggaccgc
tggttggagaggcaagaacaggaggaagaggccagagaagaagaaaacggtaggatcgag
cccctcggacgagccgactcctgcatcgaccacacccccgtgaggtcactagaagacata
gtcaaactggtggaggtgacaaacgacggtgggcccctgggaatccacgtggtgcctttc
agtggcagggaccgcaggactcttggcttgttggtcaagcgtctggagaggggagggaag
gccgagcagcaaggcctcttccaggagaatgactgtatcgtccgtatcaataacggagac
ctgcgaaacatccgctttgaacaagcccagaacatgttccgtcaggccatgcgctctcca
gtcatcatgtttcacgtggtgccgtcgtccatgaaggcccactatgagcagctgtcccac
gctgagcggaaccccgcgtacgcctcaggtcgttttagccccgactccctgaccggcagc
accgtctccggcatggaccacactccgcataggatgtcccgacatggttcccaaaagcac
caacactcccatccccaccctcattccgatgctcacctagacccgactgacggctaccca
cctctgactcatccggcagtctctgcagccaagcctccgaccggtcacacccactcacct
cagaggggggcgaactccaccccaacagtagggtataccaaaaaagttgggaggaggctc
aacatccagctaaagaaaggtcccgagggactcggcttcagtattacgtcacgggacgtt
cccattggaggctcggcacccatctacgtgaagaacatactgcctcggggagctgccatc
caagatggccgcctcaaggcaggagacaggttgctggaggtaaatggagtggacctgaat
gggcggacccaagaggaggtggtgtccctgctcagggccacacccatgggtggggcagta
gggctgctggtcctacgccaggaagatgctttcctcccccgggaagtgaatgctgagccc
caggtgcaatgcccgagagattcgcatccaaggcagccggtgatagccgggaaaccccat
tggctgattgagaagacagaggaggatgagttggtcctcactccggatgggaccagggag
ttcctgaccttcgagatccccctcagtgactcgggttcagcgggtctgggtgtcagcgtc
aaaggcaaccgctccaaggagaaccatgctgacctgggtatcttcgtcaaatccatcatc
aatggaggggcagcctgcaaggacgggcggcttcgagtgaacgaccagctgattgccgtc
aacggggaatcgctattgggcaaaaccaaccaagacgccatggagacgctccgcaagtcc
atgtcgacggaaggcaacaaacgtgggatgatccagcttattgtggccagacgagtggcc
aaaagaaatgaggagacaccagggagcccactgggaccccagcagactacgaacacctct
ctggacgaccacgagcgccgaatctcccactccctgtacggtggcctggagggtcttgat
gacaacttgatgccacgacaaggcatgatgccacgcacaataggtaactatcagctctca
ccgacagtcaacatgccgcagaacgacattgtgatcatagaggatgaccggccgccgctc
ctcccacctcacctctccgaccagtcatcgtctagctcccatgacgacgtgggcttcacc
gctgacatgacaccgccgtgggccaaagagctgcccagtcacgacagctccctggctcca
gatgaaaatcatccagacagcgctttccagagggaaggttttggacgccagagcatgtca
gagaaacgcaccaaacagtttggagacgccgctcagcttgagatcatcaaaacacgcaag
tccaagagcatggatctagtagccgacgagattaacctcacccctcgtcccgagatcaac
acaggttcctccacaaaggatgtgggaccatcactaggcttaaagaagtctagctctctc
gagagcctccagacagctgtggctgaggtcactctcaatggggacctccccttccacagg
cctcgcccccgtatcattagggggcggggctgcaacgagagcttcagggcagccatcgac
aaatcctacgaccgaccggctgccacggaggatgacgatgagggcatggagacattggag
gaggacacagaggagagttcacgatcagggagagactctgtgtccacgatggccgaccag
accccgctgtctggcacagagaagcccctggtcaacggcaccaaccgcgccaaagacgag
aagaggaaggacaaagacaagggagggaaggagaagaagaagcaggagggagggaaggag
aaagaaaagggaaaagccaagaagggcatgctgaagggactcggggacatgttcaggttt
gggaagcaccgaaaagacgagcggctgggggaaaagatggatcgtaaaggctccagcaag
tggaggcctgaggagatgcaggtttctgaggaggacacaatgaagatgcggatggagcag
gagaggatccaggccaagaccagggagctgagggagcgccaggccagggaacgggactac
gctgagattctggatataagccgcacgccagagaggtcctctgaggaggagcacccatac
gccgggatcaacccgctgaacagctccgtggacagtggtcacagtcgaccccagagcccc
cgagacgattacccccacatccatccacaccaccagcaccagcactccgataccctctac
acccaagtcagcaaggcccgaaatgaccggcctccatctgcagacagtaaccggctagcc
cctagcaaccacgaccggatacagaggctgaggcaggagttccagcaggcccagaacatc
ccggacgacccggacgaccgcaggaggacctacagcttcgagcagccctggtcgaacacc
agcagcaacggtccgggcgggtacagtcagccgggtcgccactcggtgtcggtcgaagtt
cagatgcagagacagaggcaggaggagagggactcgttcgcccaggcacaaagacagtac
agctccctgccaaggcaacccaggaagaaccctagctctatctcccaagactcatgggat
aaggcgtacccacctggagagggctttcagacggccaaggacaaccccaggtactccagc
tatcagggctccaggaacggctacccgggcggcggtggtgtcaatgctagagtccttctg
gaggcccaggagctcctgaggcaggagcaaaggcgccgagagcaggaagccaaagggaaa
ttgatgcaggagagcaccggtaacagcagctacgaggggtactccacagctcacctgaag
gacccggcctcccccaagggtccgtaccgccaagatgtgccaccttcaccttcgcagtta
gcaaggcttaatagattggggtcagagaaaggaagacttttttattcttga
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