Xiphias gladius (swordfish): 120798522
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Entry
120798522 CDS
T07311
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03030
DNA replication
xgl03410
Base excision repair
xgl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120798522 (zgc:110269)
03410 Base excision repair
120798522 (zgc:110269)
03450 Non-homologous end-joining
120798522 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgl03032
]
120798522 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120798522 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120798522 (zgc:110269)
DNA replication proteins [BR:
xgl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120798522 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
120798522 (zgc:110269)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120798522 (zgc:110269)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120798522 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
XPG_I_2
UPF0004
Motif
Other DBs
NCBI-GeneID:
120798522
NCBI-ProteinID:
XP_039998779
LinkDB
All DBs
Position
LG14:complement(10243512..10248483)
Genome browser
AA seq
358 aa
AA seq
DB search
MGITKLAELIRSDAPDAISHKDIGDYTGKVIALDTSIVVNQFRAATPTLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPGEKTAVLEKRAEAAGWRSPNCTGRASSQTKDCVHLLKLLGVP
FIQAPGDAEAMCAQLVREGSVDAVASEDMDTLPFGASILIRQLNAKRDSEVIEYSLPKLL
EKLQISHEEFVDLCILLGCDYCDKITGLGPKRALSLIHKHRTIENVVLHINRQVHPVPHF
WKYKEARKLFLDAPQTVVPELTWTEPDEEALVGFLCHVKNVKVERIRRRMERFRQMRESR
REEREKEKATGCMRQTQMKDFFRVTRRREQVNIRYKSSTEPVEAAGSLSSNRKRPKSK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggggatcacgaaactggcagaactgatccgctcggatgctcccgatgccatttctcac
aaagacatcggtgactatacaggaaaagtaatcgcactggatacttctattgttgtgaac
cagttccgtgcagccacacctacactaagccccctgacgggtctcttcttccgcacgctc
accttcctggaacatgacataaaaccagtctttgtgtttgatggaaagcctcctggggaa
aagacagctgttcttgagaagcgagctgaggcagctggctggaggtcccccaactgcacg
ggcagagcatcatcccagaccaaggattgtgtccatctcctgaagcttcttggcgttcca
ttcatccaagctccaggggatgctgaggcaatgtgcgcccaactggtgagagaggggagt
gtggacgcagtggcatcagaggacatggacacactgccgtttggagccagtattcttatt
cgccagctgaacgccaagagggacagtgaagtgattgaatattctttacccaaactgtta
gagaaactccaaattagtcatgaggagtttgttgacctgtgtattttgttgggctgcgac
tactgtgacaagataactggtttgggtcctaagagagctctgtcactgatccacaagcac
cgtactattgagaatgtggttttgcatatcaacaggcaggtccatcctgtgccacatttt
tggaagtacaaagaagcacggaagttattcttggatgcaccacagaccgtggtacctgaa
ctcacctggactgagccagatgaagaagccctggttgggtttctctgtcacgtcaaaaat
gtaaaggtggagaggatccgtcggcgaatggagaggttccgtcagatgcgggaaagtagg
cgggaggagcgggaaaaggaaaaagcaacgggatgtatgaggcaaacccaaatgaaggac
ttctttagagtcaccagaaggagggagcaggtgaacataagatacaaatcatctacagaa
cctgtggaagctgcagggtctttaagcagcaacagaaagaggccaaagtcaaaataa
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integrated database retrieval system
