Xiphias gladius (swordfish): 120798524
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Entry
120798524 CDS
T07311
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120798524 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120798524 (exosc4)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120798524 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
120798524 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120798524
NCBI-ProteinID:
XP_039998784
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Position
LG14:complement(16645217..16647220)
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRSGQIALLQMDARLHQDHLETLIEAAMTACKGVSKVLDEVVRQHLQEVS
VLTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctggagctgctgtccgaccaggggtaccgtttagacggacgaaaagccacc
gagctgcggaaggttcaggcccgcatgggggtgttcgctcaggcggacggttctgcgtat
ctagagcagggaaacaccaaagccctggctgtggtgtacggtccacacgagatgcggggc
tcacgcagtcggactcttcacgatcgggccgttatcaactgtcagtacagcatggccaca
ttcagcacagcagagaggaaaaggagaccgcatggggaccgcaagtccactgagatgagc
ctgcacctcaagcagacgttcgaagctgctgtgatgactcagctctacccgcggtctcag
atagacatctatgtcaagatcctgcagtccgatggagggaactacagcgtgtgtgtgaat
gccgccactctcgcggtgattgacgccggcatccccatgcgggactacgtgtgtgcctgc
actgtcgggtttgtggacgagaccccccttgcggacctttgctatgcagaggaaagtgga
ggagtgagctctctggccctagcgctgctaccccggagcggacagatcgctttgctgcag
atggacgccagactgcatcaggaccacctagagactttgattgaggctgccatgacggct
tgtaaaggtgtgagcaaggtgctggatgaggtggtccgacagcatctccaagaagtgtca
gtgctcactggagagtga
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integrated database retrieval system
