KEGG   Xiphias gladius (swordfish): 120798553
Entry
120798553         CDS       T07311                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120798553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120798553
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120798553
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IP5PC_F WDR54 Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 120798553
NCBI-ProteinID: XP_039998838
LinkDB
Position
LG14:complement(7715219..7724730)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCSTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSTANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcatatgtc
attagagatgaggtggagaaatacaatcgaaatggggtgaatgcactccagctagaccct
gcgctgaaccggctcttcactgctgggagggactctatcatccggatatggagtgtttac
cagcacaagcaggacccgtacattgcctctatggagcatcacacagactgggttaatgac
atagttctttgttgcaatggaaaaacattgatatctgcctcatcagatacaacagtcaaa
gtatggaatgcacacaaagggttctgtatgtcaacgttacgaacacacaaggactatgtg
aaggctttggcctacgctaaggacaaggagctggtggcgtctgcaggtctggaccggcag
atctttctttgggatgtgaacacactaacagcactcactgcttccaacaacactgttacc
acctcttcattgagtgggaacaaggactctatctacagtctggctatgaatcagatgggc
acagtcattgtatctggatccacagaaaaggttctaagagtatgggatcctcgaacatgc
gcaaaactgatgaagctaaaaggtcacacagacaacgtcaagtcgttgctgttgaatcga
gatggcactcagtgtctgtcgggcagttcagacgggactatccgcctgtggtcactcggc
cagcagaggtgtatcgccacctaccgggtgcacgatgaaggggtgtgggccctgcaggtc
aatgaggcctttacacatgtctattctggaggcagggacaaaaagatctactgcactgac
ctgcgtaacccagacatccgtgtgctaatctgtgaggaaaaggccccggtgctcaaaatg
gaactggacagatctgctgacccgcctccagcaatctgggtctcaaccaccaagtcatcc
gttaataaatggtctctaaagggaatgcacaacttcagatcatcaggagagtatgacaac
gactgcagtacccctctgacaccactgtgtactcagccagagcaagttatcaaaggaggt
gccagtattatccagtgccacattctgaatgacaagagacacatactcaccaaagatacc
aacaacaatgtggctttctgggatgtcctaaaggcttgcaagggtgaagatttggggaaa
gtggagtttgatgaagagattaaaaagcgtttcaagatggtctatgtgccaaattggttc
tctgttgatctgaaaactgggatgctcactatcacattggatgagagcgactgcttcgcc
gcctgggtgtctgcaaaggacgcagggttttcaagctctgatggatccgatccaaagttg
aacctgggtggactgctcctgcaggctctgctagagttttggcccaggactcgcattaac
cccatggatgaggaagagaacgaggtgaaccatgtgaatggagagcaggagaacagggtc
cagaaaggaaatggatatttccaagtgccaccacacacaccagttatctttggggaagca
ggaggcagaactctattcaggttgctatgtagagattcaggtggagagactgaatccatg
ctgctgaatgagacagtcccacagtgggttattgacataacagtagataaaaatatgccc
aaattcaacaaaatcccattctacctccagccccattcttcttctggtgcaaaaactcta
aagaaggatcgtctctcggccagtgacatgctccaggtgaggaaggtgatggagcacgtt
tacgagaaaatcatcaacctggacaatgagtcgcagaccaccagctccacggcgaacgat
aagcccggggagcaggagaaggaggaggacatggccatgctagccgaggagaagattgag
ctcatgtgtcaagaccaggttctggatcccaacatggacctgcgaacagttaaacatttt
atctggaaaagcggaggggacttgacgcttcactataggcagaagtccacgtga

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