Xiphias gladius (swordfish): 120798611
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Entry
120798611 CDS
T07311
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120798611 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120798611 (depdc5)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
120798611 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
120798611
NCBI-ProteinID:
XP_039998950
LinkDB
All DBs
Position
LG14:1856940..1894869
Genome browser
AA seq
1588 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNSKVFPQVSLGHIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYNAKNIDEFPEILRG
SLRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKEADGFPVGYNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRTTPGDSRVGDDYNLPHWINHSFYTSKNLNSCSSFT
PRIKLAGRKMHAEKFKSSKDHTLCAPKDSDNSLPIQVDYDAYDAQVFRLPCPSRIQRSTN
FRLGRDKEMIGRKSWGSVDVTAGIGVSPPVRSGGPEEQRSLASDDSLGPVSNMLLIPRMP
PPQYEVSSSLGYTSTRELLEKMMGSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHTSAELLE
LAYHEATGRRTTSRQAGENGLYIGGVMEEFTGSPGSNNSGTLTNHGSSFEDFSLINADPT
LLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHSDLE
RREDEAPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPQPIVATPLGSSPLYSRGLVSLR
RAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYLYESAQIQYSYSLCPPHSDAQFVS
CWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGH
WDVYGEGAGAGVGGSGDWILLDGFIRFLEGLNRIRRRHRSDRIIRQKGTPMKGLQVTSPL
PLYSSEPVPPPQGKKGTSALSALLEMEQNQKTLEEQQQQTKPSAAVSDPLSVATAPTYVD
SPRKDAAFILDFIRSPRSSFVYHSQLPAEATEAADKGVQPGMTGGAAVQPAGDTAASSST
DTSGQSSAGAPFLSSSSTLLEILEAIRHPMTGVQLLPEQKGLPLNCFISAEVVHWLVNNV
EGVATQGMAVDIMQKMLDEGLVAHASGDAMRTFVYGFYFYRIVGEKDGPISQLPPQAPGG
WSTAALEDFTLFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPASYASRHSSFSRSFGGR
SQAAALLAATVPEQKTVTLDVDINNRSDRTEWCSCYYHGNFSLNAAFEIKLHWMAVTAAV
LFEMVQGWHRKAASCGFLLVPVLEVPFALTSYLYGDPLRAQLFIPLNIQCLLKNSSDNLF
EGFEPETYWDRMQLFQEAILYRFGFVHDKFSASAFNFPSENKPQYIHVTGTVFLQLPYSK
RKYSSGQQRRRRNSTTSNSHGPFSGEDRVGYYWAYNTMLTKAWRTGVLGDERLADRLLRD
FTDFCANKDNRLLNFWDTCQEKMNASAP
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaataagtcatataagcttgtgctgcacaaaaaaggttttggcggaagtgat
gatgagttggttgtcaactcaaaagttttccctcaagtcagtctggggcatataatcgag
attgcacaccccacagatgaatacagtcccctcctgctgcaggtgaagagcctaaaagag
gacctacagaaagagacaatcagtgtggaccaaactgtagctcaagccttcaaacttcgt
gcataccaggatgtcattgttaacattgtcgaccctaaggatgtaacattggacttggtg
gagctgactttcaaggaccagtacattggcagaggagacatgtggagactaaagaaaagt
ctggtgagcacatgtgcttatgtgacgcagaaagtggagtttgcaggaatcagagcccag
gccagtgaactctgggtgaagggagagaaagtgacctgtggttacatcagtgaagacacc
agggtggttttcagatccacatctgcaatggtatacatctttattcagatgagctgtgag
atgtgggactttgacatctatggtgatctctatttcgagaaggctgtaaatggtttcctg
tctgacctttttgcaaagtggaaggagaaaaactgcagtcatgaggtgacagttgtgctt
ttctcacgtacattctacaatgctaaaaatatcgatgaatttcctgagattcttagaggc
tccctcagacaggatcatgagggacgtttttatgaagacttctacagggttgtggctcag
aatgagagacgggatgagtggacgtcattacttgtcactatcaaaaagcttttcatccag
tatcctgtcctggtgcgactgaaagaagcagatggttttcctgtgggttataactcaact
gctgctcaaggaaactacctggaggcaattaacctttccttcaatgtatttgacaagcac
tacatcaaccgtaactttgaccgcactggacagatgtcagtggtcattacacccggggta
ggagtgtttgaagtggaccgtctgcttatgattctcaccaaacagcgaatgattgacaat
ggtattggggtagacttggtgtgtatgggggagcagccattacatgcagtaccattgttc
aagctgcacaacaggacaacacctggagactctcgtgtgggagacgactataacctgcct
cactggataaaccacagcttctacacgtccaaaaatctgaactcttgtagctccttcacc
cctcgaatcaaactggccggtcgcaagatgcatgctgaaaaattcaagagcagcaaagac
cacactctctgtgctccaaaggactctgacaacagcctgcctatacaggtggactatgat
gcctatgacgctcaggtgttcagacttccttgtccttcgcgaattcagaggagcaccaac
ttcaggcttggtcgagacaaagagatgattgggaggaagagctggggctcagtggatgtc
actgcaggtataggggtgtcccctcccgtacggtctgggggtcctgaggaacagcgtagc
ctggcctctgatgatagtctgggtccagtgtccaacatgctgctgataccccgcatgcct
cctccccaatatgaagtcagcagttctctgggatacacaagcaccagagagttgttggag
aagatgatgggctctcagcgggactccagtgccccaggcaggttcacagtgggaagtgct
gagtcgacacttcacatccgtccaggaggttacaccccacagagagcgctgatcaacccc
ttcacaccatccaggatgcccatgaagctcacctccaaccgccggcgctggatgcatact
ttccctgttggtccttctggagaggcaatccagatccatcaccagaccagacagaacatg
gctgaactgcagggcagccagcagagagatcctgcccatacctccgctgagctgctggag
ctggcctatcacgaggccactggaaggcgaacaacctcaaggcaagcaggggagaatggc
ctttacattggtggagtgatggaagagttcactggaagcccagggagcaataacagtgga
actctgactaaccatggctcctcatttgaagacttttcgctcatcaatgctgatccaacc
ctgctgctgtctgcacccccgacagtgcccagcttctgctgcacggtgggggtggactgg
aagtctctgaccacaccagcctgcctgccactcaccaccgactacttccccgaccgccag
acactgcagaacgactacactgaaggctgctacgacctgctgccgcatagtgacctggag
aggcgtgaagatgaagctccagttatgagtgcgtctcaagtatttgaggagtttatctgt
cagaggttaatgcagggctatcagatcatcgtccagccaaataacaggaaaccacagccc
attgtagccacaccacttggcagcagccctctttactccagaggtctggtgtctctgcgt
cgggcagaggaggaggagacagtttactggctcagtatgggccggaccttccataaagtt
tgtctcaaagacaaaataatcactgtcactcgctacctgccaaagtacctgtacgaatca
gctcagatccagtacagctacagcctgtgtcctccacactctgatgctcagtttgtatcc
tgctgggttgagtttggccatgagagactggaggaatacaagtggaactacctggaccag
tacatctgctctgctggctccgaggacttcagtttgattgactctttgaagttctggagg
actcgcttcctcttgctgccagctggaggggcgcggcgggtggcagatggggagggccac
tgggatgtttatggggagggagcaggtgctggggtaggtggcagcggggactggatactg
ctggatggcttcatccgcttcctggagggtctcaaccgcattcggcgacgccatcgctcc
gacaggattatcagacagaagggcacaccaatgaaaggactgcaggttacgagtcctctc
cctctgtattcttccgagcctgtgccgcccccacaaggcaagaaaggcacatcagcttta
tcagccctgctggagatggagcagaatcagaagacgctggaggagcagcagcagcagaca
aagccatcagcagccgtcagtgaccccttaagtgttgccacagctcccacatatgtagac
agtccccgcaaggacgctgcctttattttggattttatacgtagcccacgctcctccttc
gtctatcactctcagttgcctgctgaagccactgaagctgcagataagggagtccagcct
ggaatgacaggtggagcagcagtgcagcctgcaggagacactgcagccagcagcagcaca
gacaccagtggccagtcttcagcgggagccccctttctgtcctcttcctcaacactcttg
gagatcctggaagccatcagacatcccatgacaggtgttcagctgctcccagagcagaag
ggtctgccactcaactgctttatcagtgctgaggttgttcattggctagtcaacaatgtg
gagggcgtggctacacagggcatggctgtggatattatgcagaaaatgctggatgaaggt
ttggtggcccatgcttctggcgacgcaatgcgcacctttgtctacggtttctacttctac
agaatagtaggagagaaggatggcccaatctcccagctccctccccaagcacctggaggt
tggtccactgcagccctggaggacttcaccctgttccagaggaagtggttcgaggtggct
tttgtattagaggagcggcgaccctgcgacctcccagccttcctccttccctggttgccc
agtcggccggcctcctacgcaagtaggcacagctccttcagccgcagctttggaggacgc
agccaggccgccgcactgctagctgctacagtccctgagcagaagacagtcactctggat
gtggacattaacaaccgcagtgaccgaactgaatggtgcagttgttattaccatggaaac
ttctcccttaacgctgcctttgaaatcaagctgcactggatggctgtcactgctgcagtc
ctctttgagatggttcaagggtggcacagaaaagcagcctcctgtggcttcctgttggtt
cctgtcctggaggttcctttcgctctgacgtcatacttgtatggagacccactgagagcc
cagctcttcatccctctgaacatccagtgtctgctgaagaacagcagcgacaacctgttt
gaaggttttgagccagagacatactgggacagaatgcagctctttcaggaggccatactg
tacagattcggctttgtgcatgacaagttttctgcttctgcttttaatttcccctctgag
aacaagccccagtacattcatgtaacaggcactgtgttcctgcagctgccatactccaag
aggaaatactcaagtgggcagcagcgccggcgcagaaactccaccacgtccaacagccac
gggccattcagcggtgaggatcgggtcggttactactgggcctacaacactatgctgacc
aaagcctggaggacgggcgtgctgggtgatgagaggctggcagaccgcctgctcagagat
ttcactgacttctgcgccaacaaggacaacaggctcctcaacttttgggacacctgccag
gagaaaatgaacgccagtgccccctga
DBGET
integrated database retrieval system
