Xiphias gladius (swordfish): 120798658
Help
Entry
120798658 CDS
T07311
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120798658 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120798658 (tpra)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120798658 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
120798658
NCBI-ProteinID:
XP_039999045
LinkDB
All DBs
Position
LG14:4066019..4107290
Genome browser
AA seq
2535 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEALRTQHERFKADSEQQYFDIEKR
LVESQEQIRSATKDLQTLKEENKKLNEELNTLKGIEGETFEDKTPQQQTKAKYEIEAEKR
ELARLLEKRTQEVENLTEDVNRLNEKLTETNKFKMELQLKLDDIQSSEASVQHREKRMEQ
EKELLEKKIEWLSAELKTKTDELLNTNRDKGKEILELQGSLKNSKEQVTRLESHLTSLKE
TSESQSKRAEDLNNKLKQAKDEQSAMEEKYRNELNAHVKLSSLYKGAATDLETKNQELSR
AVEELSKLVKDTGEANKTLEKKVSEGEELKMQLDAELREKIKKMEKELENATVKAAGKHC
CGPSLTEEQLDYMCPSAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDE
IIQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKEEAKQRCDALERD
KLRTERQLEDTSTQVCALLVELEEARGNQVTKDDNSSADISSTSEVISPRQLSFRSVEEL
QRQNQSLLGRLRELEQEKDRQQNIVTSERVSELEANVDKLQKEVDQLREQRNQQKQLADS
NARQRDMYKTLLTHSTGFSLPPQGLDSSSQPANVRPSAPGTRSTPQRAAAAESAQATQAK
AALKQLNDAFSLYKKEKAENDRILNETNDRLQRQLTELNSSHAKLTSQLEFSNKRYEILQ
ENVSAYRREISALQDRNQKMATMAQQHEHIIHTMSQDLRQANEKLALEEVRVNNLTKERD
ILRQAESRLTREKEAILAEQRNQNLLLTNLKTIQLTMERTETETRQRLNNKIEHLESELA
SMKTRMDQEIAQRHTLGRTMDAQLLEAKKQLETQNTLQQKTKELLRSSEQQVAALKAQLA
SASSSEAVTSSSNTTTPATRAASLRAPLKVRSQGPAACQQPSQSEQELAEVKGLLHTAEE
KNSELVEQLKNANSTVEQYRAVVLTLEDSLKKEKESRSPLEIRLKESEEVQKQLENRILE
AEKMKQLEQEERRKAVDAVEKQVSELQRSLKASQAEQQEALERSAAAVTLEQKAVQDSLL
QTKLAGEAQAKYERELMLHAADVEALQQLKKKIQQEAAQKRELEEQLNKTSSLLQEKTAA
WNTLERQLKEDLSNQSHRSEELGKQNALLHQQMDEMASRSRQQQQQQQQLDLSFSEEGKT
TEQILEILRFVRREKQIAVARCEVSEGEALRYKQRVEHQDRELKELQEALNAEREKMQAT
AKTLAQQEEQLKKMDCISALQETNRMLKMDREKLEQELQQAQAKVTKLQSDISPLHHSLS
QLSERNGSLQADKRILEDDLKRWKAKVQQLVSQQKDGDVEERQKLTTEREAQQRRIAQLA
EETAKLKTEVARSSASNNAAQSQLQALKDSVAQLMSERDTLKKDLETKSNDILEKNKTIT
QVKKIGRRYKTQYEELKAQHDKLVAETAAKAASEAAPSHEVQQELTKAQEELNKNREELK
TLKDDVQKKQEETQKAQQELEEAQKETQKTKERFQEIQNQLTQKQNQLTQAQSQLSQTQA
QLQQNQNQLTQSQKELQQAKTHTQQVQNHLKSAQSQAQARQNQIQQIQRELQQAKEALQQ
NLTNQKELQQTHQTTQHSHNQEVNNLKTALSQAEGKVTELQGQLDILQKTVGEREADVKR
LQEQLTEANQANEASRATQAKSSQPIQASDANAASDTNQALQEELTKLRQELLETKSSEE
QMKQQMADKEEKTKKAFLGAKTKINQLNSAKEQLSEEIEQLKQSKEELEVRMNALKSQYE
GRLLRLDRELRELRETQTHSDSREEPQDQSGAKVGDQPRSADQRQIPLKSPAQDRGSSSL
SEPPTANIRPTPSTPSPSNKPSPSPGSKATPRASIRPMVTPSTVPIPTPTATVMPTTQTD
SQEGEKQELKMLMSAGASVHSTSSSLVSAPTSITQPTSTQATAFVQPTQQQAASQDAGSS
MEAERPSTSSSLIGTGGSKRARDEEEEEEEEEESRPESSHTPPTTKKLRLKPTVALQMEG
DEEMEGELRDEGERQDSPDDSQELPEEGFPVLAEDDEEIEDEGVSQSVPSYQMSSQDSAI
VRDVIVIDTDSESCESKEGARKQEDEGEEEEEEEEVEEYKEEEDDDEDEEDAGDSGMRGG
GESNEKSMEPEDEGEEDDPSEATNTEEIVCGASSDSQRPSEPPQSSEGSSSATSESDPTR
DPLHLPPTSSSSAPSPSSSLTPRLPHPRRPTHSLPPRLYIQPPAPELGPPHTQRQSSQLR
RPSVGRGLQLTPGIGSTQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFR
FGPPEDLLPQTSSSHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVT
VFTESLPSDSGDNMASQSVPMVTASTGMAAAADDGDEVFVEQEGEGPGIESSLESQTDVE
SAGQQSDDASLPSTSQDPDTSSVTQRRTVNSQPLMSNPPGRGARGGRGEARLLLSRRGTF
SRGGRGGAMGRGGIA
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggagcggacggagttgaacaaactcccgaaaggt
gcccagaacaagctcgagaagtttgtaacggagctgcagaatgctaacgaggcgctcagg
acgcagcatgagcggttcaaggcagacagtgagcagcagtactttgacattgagaagaga
ctggtggagagtcaggaacagatccgttctgccaccaaggacttgcagaccctaaaggag
gaaaataaaaaactcaatgaagagctgaatactctgaaaggaatcgagggagagaccttt
gaagataaaacaccgcaacagcaaacgaaggccaagtatgagattgaggcagagaagaga
gagctggcgaggctgctggagaagagaacgcaggaggtggagaaccttactgaggatgtt
aaccgtctaaacgagaagctgacggagacgaacaaattcaagatggagctgcagttaaaa
ctggatgatatacagtcatctgaagcttctgtacagcaccgggagaagcgtatggagcag
gagaaagagttacttgagaagaaaatcgagtggttatctgcggaactgaagaccaaaact
gatgaactgctgaacacaaacagagacaaaggcaaagagatactagagctgcagggcagt
ctgaagaacagcaaggagcaggtgaccagactggaaagtcacctcacctctctaaaggaa
accagtgaaagccagagtaaaagagctgaagacctcaacaacaagctgaaacaggctaaa
gacgagcagagcgctatggaggagaaataccgcaatgagctcaatgctcatgtcaagttg
tcttcactctacaagggagcagcaacagacttggagaccaagaaccaagaattgtccaga
gcggtggaagagctcagcaaactggttaaagacactggggaagccaataagactctagag
aagaaggtgtcagagggagaagaactaaagatgcagcttgacgcagagcttagagagaaa
atcaagaaaatggagaaagagctggaaaatgctacagtgaaggctgctggcaaacactgc
tgtgggccttccctgactgaggagcagttggactacatgtgtccatcagcagctgccatt
gctgcaattgtaaagcctggcatgaagttctttgatctgtataatgcgtatgcagagtgt
cagacacagcttcagctcgagaaacaggagaccaggagagtgagcagagtgctggatgag
atcatccaggaagtcgagtccaaagctcccgtcctgaagcgtcagagagaggagtatgag
agcatgcagagatccatggcctccctgtgcaacaaactggaacaggctcgaacggaaatc
tacagtttgcaaaaagagaaagaagaagcaaagcagcgctgtgatgccctggagagagac
aaactaaggactgagagacagttagaggatacgtctacacaggtgtgtgctcttctggtg
gagctggaggaagccagaggtaatcaggtgaccaaggatgacaacagttctgctgacatt
tccagcacctctgaggtcatcagcccacgtcagctgtctttccgcagtgtagaggagcta
caaaggcagaaccaaagcctgctgggaaggctgagggagcttgagcaggagaaggacaga
cagcagaacattgtaacgtcagaacgtgtatcagagttggaggccaatgtggataaactt
cagaaggaggtggatcagttgagagagcagaggaaccagcagaaacagctggctgactcc
aatgccagacagagagacatgtacaagaccctgttgacacacagcactggcttcagcctg
cctcctcaaggtctagattcttcatcccagccagcaaatgttcgtccttcagccccaggt
actcgctctactccgcaaagagctgctgctgccgagtcggcacaggctactcaggctaaa
gctgctttaaagcagctcaacgatgccttcagtctgtataaaaaggagaaagcagagaac
gacaggatattgaatgaaacaaatgacaggctgcagagacagctaacagaactcaactcc
agccatgccaagctgacttctcaactggagttcagcaacaagaggtatgagatactccag
gagaatgtatcagcctaccgcagagagatctctgcccttcaggataggaaccaaaaaatg
gctacaatggcccagcaacatgaacacatcatccacacgatgagccaagacctgcgacag
gctaacgaaaaactggcacttgaagaggtgcgtgtgaataacttgaccaaagagagagac
attttaagacaagcagagagtcgactgactcgagagaaagaagccatactggctgagcaa
cgtaaccagaacctgctgctcaccaacctcaagactatacagttgactatggagcgtaca
gagacagagactcgtcagcgactgaacaacaagatagagcacctggaatcagagctggct
tccatgaaaaccaggatggaccaggaaatagcacagagacataccctcggacgcactatg
gacgctcagttgttagaagcgaagaagcagctggagacacagaacaccttacagcagaag
accaaggagttgttgcgtagttctgaacagcaggttgcagcgctgaaagcccagctggct
tctgcttcatcctctgaggctgttaccagctccagcaataccactaccccagctaccaga
gctgcaagcctcagagcacccctgaaagtacgttctcaggggccagcagcctgccagcag
cccagccagtcagagcaggagcttgccgaggtgaaaggtcttctgcatactgctgaggaa
aagaacagtgaactagtagagcagctgaagaatgctaattctactgtagagcagtacaga
gctgtggtactgactctggaagacagtctgaagaaagaaaaggagtcccgctcccccctg
gaaatccgactgaaggagtcggaggaggtgcagaagcagctggagaataggattttagag
gcggagaaaatgaagcagctggagcaggaagagaggaggaaggctgtggatgcggtggag
aaacaagtgtctgagctgcagcgcagtctgaaggctagtcaggcagagcagcaggaggcg
ctggagagatcagctgccgctgttacactggagcagaaggccgtacaggacagcctgctg
cagactaagcttgctggagaggcgcaggctaagtatgagagggagcttatgcttcatgct
gctgatgtggaggctctgcagcagctcaagaaaaaaatccaacaagaagcagcacagaag
agggagttagaggagcaactaaacaagacctcctccctcctgcaggagaaaactgcagcc
tggaacacactggagagacaactgaaggaggacctgtctaatcagagtcatcgctctgag
gagcttgggaagcagaatgctctcttgcaccaacagatggatgaaatggcctccaggagt
cgccagcagcaacagcagcaacagcagcttgacctgtccttcagtgaggaagggaagacc
actgaacagatactagaaatactgaggtttgtgcggcgggagaaacagatcgctgtggct
cgatgtgaggtgtctgagggagaagctcttcgctataaacagcgagtggaacaccaagac
agagaactaaaggagttacaggaagctctgaatgctgagagggagaaaatgcaggctaca
gcaaagactctggcccagcaggaggagcagctgaagaagatggactgtatcagtgctctc
caagaaaccaacaggatgctgaaaatggacagagagaaactggagcaggagctgcagcaa
gctcaggctaaagtgacaaagctccagtcagacatcagcccactgcatcactcgttgtcc
cagctctccgaaagaaacggctccctgcaggctgataagaggattctggaagacgacctc
aaacgctggaaggctaaagtacagcaactggtgagccaacagaaagatggcgatgtggag
gagagacagaaactgaccactgagagagaagctcagcaaagacgcatcgcacagctagct
gaagagacagccaagctgaagactgaagtggccagatccagtgccagcaataatgcggct
cagtctcagctgcaagccctcaaagactcggtggcccaactgatgtcagagagggacact
ctgaagaaagacctggaaacaaaaagcaacgacattctggagaagaacaagaccatcacc
caggtcaagaagatcggacgacgctacaagacccagtatgaggagctcaaagcccagcat
gacaagctggttgcggaaacagcagctaaagcagcaagtgaggcagctccaagccacgag
gtgcagcaagagctgactaaagcccaggaagagctcaacaagaaccgagaagaactgaaa
acactgaaagatgatgtgcagaaaaaacaggaagagactcaaaaggcccagcaagagttg
gaggaggcccagaaggaaacccaaaagaccaaggaaaggttccaggagatccaaaaccag
ctgacacagaagcagaaccaactgacacaggcccagtcccagttgtcccagacccaggct
caactgcagcagaatcaaaaccagttgacccagagtcagaaagagcttcaacaagccaag
acccacacccagcaggtacaaaaccatttaaaatcagctcagtctcaagctcaggcccgt
cagaaccagattcaacagattcagagggagctccagcaggcgaaagaagccctccaacag
aacctcaccaatcagaaagagctacaacagacccaccaaaccacacaacacagccacaac
caggaagtcaataatctcaagactgctctgagtcaagcagagggcaaggtgactgagctc
caaggccaactggacatcctgcagaagacggttggtgaacgtgaagcagacgtcaagcgt
ctgcaggagcagctaactgaagctaaccaggccaatgaagctagccgagcaacacaggcc
aagagttcccagcccatccaagccagtgatgctaatgctgctagtgacactaaccaggca
ctacaagaggagctgactaaactcagacaagagcttttagagaccaagagcagtgaggag
cagatgaaacaacagatggctgacaaagaggaaaagactaagaaggccttcctgggagct
aagaccaaaatcaaccaacttaacagtgccaaagagcagctcagtgaggagatagaacaa
ctgaaacagagtaaggaggaactggaggtgagaatgaacgcactcaagtcccagtatgaa
ggtcgacttcttcgcctggacagagagctgagagaactgagagagacacaaacgcactct
gactccagagaggagccacaggaccagagtggagctaaggtgggtgatcagcccagatct
gcagaccagagacagatacctttgaagagtccagcccaagacaggggaagctccagcctg
tctgagcctcccactgctaacatccgccccaccccaagtactccatctcctagcaacaag
cccagcccctcccctggtagcaaggccacgccccgtgccagcatccggcctatggttacc
ccatcaactgtccccatcccaacacctactgccacagtcatgcccaccacacagactgac
agccaagagggtgagaagcaagagttaaaaatgctaatgagcgcaggagcctctgtacat
tccaccagctccagtctggtgagcgcacccacctccataactcagccaaccagcacacag
gccacagcttttgtccagcccacccagcagcaggcagccagtcaggatgcagggtccagt
atggaggcagagcgaccatccacgtcatcctctctgattggaacaggaggttcaaagcga
gcaagagatgaggaggaggaggaggaggaggaagaggagagcagaccagagagttcccac
acaccaccgaccactaaaaaactacgactaaaaccaacagtagcgctgcagatggaaggt
gatgaggagatggaaggagagctgagagatgagggggagcgacaggactcaccagatgac
agtcaggagcttccagaggagggtttcccagttttagctgaagatgatgaggagattgag
gacgaaggcgtgtcccagtctgtcccctcttatcagatgtcctctcaggactctgctata
gtccgggatgtcattgtgatcgacacggacagcgagagctgtgagagcaaagagggggca
aggaagcaggaggatgaaggggaagaggaagaggaagaggaggaagtagaggagtataag
gaggaagaggatgatgatgaagatgaggaagatgctggtgacagcggaatgaggggagga
ggggagagtaatgagaagagcatggagcctgaagatgagggagaggaggatgatccatca
gaagccaccaacactgaagagattgtgtgcggagcatcttcagactcccagcgtccctct
gagccgccacagagcagtgaaggcagcagtagcgccacatcagagtctgaccccaccaga
gaccctttacacctcccaccaacctcctcctcctctgcaccttcgccctcctcctccctc
acaccccgcttgccccacccccgtaggcccacacactctctcccaccaaggctctatatc
caacctccagctccagagctgggacccccacatacacagagacagtcctctcagctgcgc
agaccatcagtaggacgtggtcttcaactaactcctggaataggcagtacgcaacatttc
ttcgatgatgatgacaggatggttcctagtactccaacgttggtggtcccacaccgcact
gatggctttgctgaggctatacattctcctcaggtagcaggtctgtccacaaggtttaga
tttggccctccagaagacctgctacctcagacatcatcttcacactctgacctgggacag
ctggcgtctcaaggaggtttggggatgtatgaatctcctcttttcctggctgcacatgat
gaagacggaggaggaaggagtgtccccaccacacctttacaagtggccgcaccagtgaca
gtcttcactgagtctctgccctcagacagtggtgataacatggcctcccagtctgttccc
atggtaactgcctccaccgggatggctgctgctgcagacgacggagatgaggtcttcgtg
gagcaggaaggagagggacctggtattgagtcttctttggagagtcagacagacgtggag
tcagcaggacagcagagtgatgatgcatcactgccatctactagccaagaccctgacacc
agcagtgttactcagcggcgcactgtgaacagccaacctctgatgagcaacccgccaggc
agaggagccagaggaggcaggggggaggccaggctgttactcagccgcagaggaactttc
tctcgaggaggaaggggaggggccatgggcagagggggcatcgcctga
DBGET
integrated database retrieval system
