KEGG   Xiphias gladius (swordfish): 120798708
Entry
120798708         CDS       T07311                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120798708 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120798708 (ndc1)
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120798708 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 120798708
NCBI-ProteinID: XP_039999176
LinkDB
Position
LG14:20900921..20910274
AA seq 669 aa
MFSTDQSCWFIRKVICWRAAASIAWAVLLLPPITSVFVILSRFSLLHPIHTLSECLSLLT
SASAIFSFILLCGAILMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFVNSLVHCIMGM
IVAWCCAVTIGGRYETLGYQCTQSDGSPQMCLNEYHLIFLLAGAFVGFSHSLLGVIHNMN
YVSFHTVQQYKYLRFKGSLPLVLKCSATQALYSIRNYIVVYFFLGYIPRAWICKTLNLHL
NSSVQPLDSITGLLDLSLLYHLWISASFLLFTWYITLLLFRIFVTEVYSFPVQPSFTEDD
HHCLSKVLANKQPMILKFLALQDLALLSQHSPSRRFEVFSLSQPGGHAHNWNAISRECLS
LLADLTQRLVAYHDTVATNGRAKSLSTGSERKTSSEASVTSGTEDLMSPRPPLLMKTPAS
VLARSIAGGPQSPLTAPFTPDLDSPFASPALRRLTASAEQCSPWYGTVQSPHIMRRAPKL
WSTSTDSQVNGSPHPSPASVPSPKQEPSKPGLLAQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASYSEDQFGVVQTTLPSILSCMLVLQEAVDRH
FKLPHASSKPVRSTSSMGDSSYKTLRFALRATLKTAIYRISTTFGHHLNAVQMSAEHWKR
LQQFLEYKE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgttttctactgatcaaagttgttggtttatccgcaaggtgatttgctggagagctgcg
gccagtattgcttgggctgtcctgctgttgccacccatcacatccgtttttgtaattctc
agcaggttcagccttctccaccccatccacacgttatcagaatgcttgtctttgctaaca
agtgcgagtgccatcttctccttcatcctcctgtgtggcgcgatcctcatggtggggttt
ctgaacctggagtattatacagtcatcccaactatcgcatgctcgaaaatcgccctgttg
ggtcagctgctccaccctcgtcagtttgtcaactccctggtccactgtatcatgggaatg
attgtggcttggtgttgtgccgtcaccatcgggggcagatatgagacgcttggctaccag
tgcacacagagcgatggttcccctcagatgtgtctgaatgagtatcacctcatctttctg
ctggccggagcctttgttggattttcccacagtctattgggggtgatccacaacatgaac
tatgtctccttccacactgttcagcaatacaaataccttcgcttcaagggatctctgcct
ttggtcttgaagtgcagcgccactcaagcactttactctatcaggaactacattgttgtg
tatttctttttgggatacattccaagagcatggatctgcaaaacactgaatcttcatttg
aacagctctgtccagcctcttgacagcataactggactgctggacctctccctgctctac
catctgtggatcagtgcaagcttcctcctctttacatggtacatcacactgctgctcttc
aggatctttgttactgaggtgtacagttttcctgtgcagccatctttcactgaagatgac
caccactgtctatccaaagttcttgcaaacaagcagccaatgatattaaagttcctagct
ctgcaggacttggctctgctgtctcaacactccccatcacgacgctttgaggtcttcagt
ctgagtcagccaggtggccacgctcataactggaacgccatcagtagagagtgtctgtct
ctgctggccgatctgacccagagacttgtggcctatcatgacactgtcgcaaccaatggc
agggccaaatccctgtctactgggagtgaaaggaagacttcatctgaagcgtcagtaacc
tcaggcacagaagatttgatgtccccgaggccccctctgctgatgaaaactccagcttca
gtcttagctcgctccattgctggaggccctcagagccctctgacggcaccgttcaccccc
gacctggacagccccttcgcttctccggccctgcggcgcctcactgcttcagcagaacaa
tgctcaccgtggtacggcacggtgcagagcccgcacatcatgaggagagcgccaaaactc
tggtccacctcaacagattcacaggtcaatggcagtccccacccatcccctgcctcagtt
cccagtcccaagcaggaaccctccaaaccaggtctccttgctcagttcctccagaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaagcctccagtcaggctctctttgctgacagccaggctcatatctgggcttta
gaaggactctcttatcttgttcaagcctcctactcagaagaccagtttggggtcgtccag
actacattacccagcattctcagctgcatgctggtcttacaagaggctgtggatcgccac
ttcaagctgccccatgcctcgagtaagcccgtcaggtcgaccagcagcatgggagactct
tcttacaaaacgctgcgctttgctctcagggccacactcaagactgctatctacaggata
tccactactttcggccatcacttaaatgctgttcagatgtctgcagagcattggaaaaga
ctgcagcagtttctggagtacaaggaataa

DBGET integrated database retrieval system