Xiphias gladius (swordfish): 120798738
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Entry
120798738 CDS
T07311
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120798738 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120798738 (rpap2)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120798738 (rpap2)
Protein phosphatases and associated proteins [BR:
xgl01009
]
HAD phosphatases
Fcp/Scp phosphatases
120798738 (rpap2)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120798738 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
120798738
NCBI-ProteinID:
XP_039999248
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Position
LG14:10431517..10442085
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AA seq
689 aa
AA seq
DB search
METEGRRRSRVSSKTSEKGGKRVKALTAEEEARRRELVKEKLREKLELEKRALKVVERLL
EDSVAEDFLVDCAKFITPANYKDAVEERSITKLCGYPKCPNKLGKIPTQQYKISTKTNKV
YDITERKCFCSNFCYKASKEFELQISKTPLWLRQHESPLEIKLMKKGDSGSSGEEVVLSV
RRLQEEDIENPLAAQPEDPHSSQQHCPRDGLCHSDSSDMEQEQDFVSSMVSQPQGPRVHW
GDLPKSVDEDQKGKRGKMARRKEENAEGDVEEIEHHQSQDAEGEGKMREEEKRKESDACK
TEVRTDAEQLLIRNADLVLPEEKDLLEEPSVEEFSAKMNLCSLSETVTHTIPLPVDSTPT
QAEHTTPLTSPPFIDSKRPTENKHLSSSTQTTTDQKGRNTTVPAQPGLHITQVGMSKKGA
AGLRDLLKNHTATPKHNSIRLNLLECLRRTLKEWSTDETLKFLYGAEHSLGSPFADVKEE
EEEDKGEELDEDDLEDEGTVEDGGGVDAGVLKRPPAATPDYETLRKDSQQLELRVREFYK
GTWILPEEVEALNGNKVTVQDQGTKDPVLPLVDSHAQHLIQKRITVEKLTSCLRNIVGPL
HLTMSDVSTDLNSLIRTFRFTNTNIIHKTPEWTLIAVVLLHLLSEVSLVVREALETPASV
AYLNTLMEELGLQEQDLLNLVRLFKTPTH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaggggaggagaaggagcagagtctcctccaaaacctctgaaaaaggtgga
aaacgtgtcaaagcgctgactgctgaagaagaagcaagaaggagagagttggtgaaggag
aagctgagggagaagctggagctggagaaaagagcactgaaagtagtggagcgtcttctg
gaggacagcgtggctgaagacttcctggttgactgtgccaaattcatcactccagctaat
tacaaagatgctgtagaggagagatccattactaaactgtgtggttatcccaaatgtcca
aataaactgggaaagatcccaactcaacaatataaaatttctacaaagaccaataaagtg
tacgacattacagagcgcaagtgtttttgtagtaacttctgctacaaagcctccaaagag
tttgagctacaaatatcaaagacgcctctttggctcaggcagcatgagagccctctagaa
attaaattgatgaagaaaggagatagtgggagctctggtgaggaggttgtgctttcagtg
aggcgtctccaagaggaggacatcgagaacccgctggctgctcagcccgaggatcctcac
agctctcagcagcattgtcctagagacggcctctgccacagcgacagcagcgacatggag
caagagcaagactttgtctccagcatggtctcccagccgcagggacccagggtgcactgg
ggtgatctgcctaaaagcgtagatgaagaccagaaaggaaagcgaggaaagatggcgagg
agaaaggaagagaatgcagagggagatgtagaggagatcgagcatcatcaaagtcaggac
gcagagggggagggaaaaatgagagaagaggagaaaaggaaagaatcagatgcatgtaaa
acagaggtgagaactgatgctgaacagttgctcataagaaatgctgacctggtactgcca
gaggagaaagacttgcttgaggaacccagtgtggaagagttttcagctaagatgaatctg
tgcagtttgtctgagacggtcactcacactattcccctgcctgttgactcaacacccaca
caggcagaacacactacaccactcacctctcctccatttattgactcaaaacgcccaaca
gaaaacaaacatctctcttcttcaacacaaaccaccactgatcagaaaggccgcaacacg
acagtccccgcccagccaggactccacatcacccaggtgggtatgagcaagaaaggggca
gcagggctacgagatctactgaagaaccacaccgctacacccaaacacaactccatccgg
ctgaatctcctcgagtgcttgagaagaaccctgaaagaatggagcactgatgagaccttg
aagttcctgtatggtgctgaacattcactaggctctccatttgctgatgtaaaagaggag
gaggaggaggacaaaggggaggaactggatgaagacgaccttgaagatgaggggacagtg
gaggacggtggaggggttgacgctggggtgctgaagaggccaccagctgcaactccagac
tatgagacgctgaggaaggacagccagcagctggagctcagagtcagggagttttataaa
gggacgtggattctgcctgaggaggtcgaggcactgaatggaaacaaggtgacagtccag
gaccagggcacgaaggacccagttctgccactcgttgattcgcatgctcagcacctcatc
cagaaaagaatcacagtggagaagctcaccagctgtctcagaaacattgtgggtccgctg
catctcaccatgagtgacgtctccaccgatctgaacagcctgatcaggacattcaggttc
accaacacaaacatcatccacaaaactccagagtggaccctcatagctgtggtgcttcta
catctgttgtcagaagtttccctggtggtgcgggaggccttggagacgccggcatcagtg
gcgtatttgaacacgctgatggaagagctcggcctacaggagcaggatctgttgaacttg
gtgcggctgtttaaaaccccaacacactga
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