Xiphias gladius (swordfish): 120798841
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Entry
120798841 CDS
T07311
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120798841 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120798841 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120798841 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120798841 (rb1cc1)
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120798841 (rb1cc1)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120798841 (rb1cc1)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120798841 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TMF_DNA_bd
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120798841
NCBI-ProteinID:
XP_039999506
LinkDB
All DBs
Position
LG14
Genome browser
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIPHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMYEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDTAYTNYQQ
DLEEIKVKLTKLGTAVSVMARIPLLESLTRHSYRESIEKSSSTQEKDSDETEEEKSTDSV
RFTTDAQRASKLSASFSASGTATREPTGDQETNEMTDSGGLRAALLDEDTPEFANPSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMVPTMCD
FEPLNHHVETLHQLVQAAQSVDEMSQTITDLLSEQRASCCQSAQRSTVLTPQSESIPGTT
TLMSSKTPSSLSLQGPSCKPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENITSPNPISDPTSPDMMVESLYSSVINAIDNKRMQ
DTTTLERENLRIAILKQVIDKYQSAAEESHSNLRSVKDDLYHLRGLVLKEQNDFGFVLRS
MTTEVRNIVDNFCQTHELELKEQHQSELLSVRQELEKQVQTLTEENRVNQNIVRDVQRAM
LELEGLMERKEKEITQLENERERWVETESSQTDRIKNLEQMITDQAEEIETLSASRDSLT
SQLENLHFEIERGQQKIRQELEVVEQSHLKELEDRMKQEHKAELETITKDNQDVLKRLVA
ENSAKLSEAADHHGTALREKDNQVKDLEARITEFAELRCKLEVELALKESETEEVRLLFE
EAKILQAEAVKSQVEAETKVFSEELADIKKQLQVKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEETILLRNELSSLQQQAQDAERNHAEQQQKLKQELDQQVALSEEKGKKLWSFQQ
GEQELRTVINKLQAECDLLSEKLEQERQAVEKDLEKEEANKVASPDAFKELEQQKEEIEK
RLLQKIKTLENELHERQFSKSDEGLLLHADGHADAGAPLSLDSALQERLQQERASLQSQM
ELLEKKKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRKVTQQQEKDKA
LIETLSEDRASVMQEKKHLEEELNRLRSTALVSSAFFTPNPSAQEVTEAGAEAARALPVA
GACSSEPMAETDRLTSVGAVRDDEHVDSAVEASMVTVHDNILMSEEKQRILLLERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNR
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgatctt
gctgtccaaactgtactggagcttaaacatgccatccaagcaaaatataagattgcaatt
ccacatcaagtccttgtcgtcaatggaggggaatgtatggctgcagagagacgagtctgc
agctacagtgctggcactgaaaccaaccccatattcctgttcaataaagagatgatcttg
tgtgaccgggatccaacgatccccaaaacgaccttctcgattgagagtgagattcaggtc
aaggtggaggaatctctactgatgccagctgtctttcacactgttgcctcacgaacacaa
cttgctctggaaatgtatgaagttgccaagaagctttgctctttctgtgagcgtttggtt
catgatgaacatcttcaacatcaaggctgggctgctattatggctaatctggacgactgc
accctgtcttatcagaaattgctcgtgaaatttgacactgcatacacaaattatcaacaa
gatttggaagaaattaaggtgaaactgacaaagttggggacagcggtttctgtgatggct
aggatacctctgctggaaagtttgacaagacacagttacagagagagcatagagaagtcc
agttcaacccaagaaaaggattcagatgagacagaagaagaaaaatccaccgactccgtg
cgcttcacgactgatgcacagagggcctccaagttatcagcatccttctctgcttcgggg
acagccacacgtgagccaactggtgatcaggaaacaaatgaaatgactgacagtggtggc
ctgagagctgcgctattagatgaagacactccagagttcgccaacccgtcctccttcaat
gtcacactattagactggataaacgtgcaagacagacccaatgatgtggaatcggttgtg
aggaaatgctttgattccatcaataggcttgaccctcggatcattcagcccttcctggca
gattgtcgtgacacaattgccaagctcgataatcaaaatatgaaagccataaaggggctt
gaggacaggttgtatgctctagaccaaatgattgcaagctgtaagaagttggtgaatgaa
cagaaagaacttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggat
acatctgttctgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaat
aaccacaggaagctgctagacatcaaaaagaaatgcaccactgccaaacaagaacttgca
aacaaccttcaagtccgactcaaatggtgctgctacgtgatgcttcatgcagaccaggat
ggcgagaagcttcaggccctactcagacttctgacagaactaatggaaagagtgagagtg
gtggaggccctcagtactgtaccccagatgtactgcttggcggtggtggaagttgtcagg
agaaaaatgttcatgcgccactacagagagtgggcttatgcacttgtgaaggatgggaaa
cgactctatgaggcggagaagttcaaaagggaatcctttgggaaactctttaggaagtct
ttcctcagaaatcgtttgtttagaggacttgattcatggcctccaacatcattctgtaca
cgaaagcccagaaggtttgatgatgaacttccagacatctcacttgatgacctgcagtac
ttgaaatcttgttgtcctgtagaggtgcagcctttccttatggttcccacaatgtgtgac
tttgagcccttaaatcaccacgtagagacgcttcaccagctggtccaagcagcacagagt
gtggatgagatgtctcaaactattactgacctgttaagcgaacaaagggcatcctgttgt
cagagcgctcagagatcaaccgtgctgaccccacagtctgaaagtataccagggaccacc
acattgatgtcctccaaaaccccttcctctctaagccttcagggacccagttgcaagccc
ctacatgttcctgtcccagctcctctagaggacttgtccccagacagcattgatgcacaa
acatttgactttgaaaccattggccatccgaacatggatccagtcctgcagcagggctcc
cttgacctggactctctagcagagagccctgaatccgacttcatgtctgctgtcaatgag
tttgtgattgaagagaacattacctctccaaaccctatcagtgaccctactagccctgat
atgatggtggagtctctgtactcttcagtgattaacgctattgacaacaagcgtatgcag
gataccacaacactagaaagggaaaacttaaggatcgctatcctcaaacaagttattgac
aagtaccagtctgctgcagaggagtcccattccaacttaagaagtgtgaaggatgacctc
tatcacttacgaggtctagtgttaaaggaacaaaatgactttggctttgtcctgaggagt
atgaccacagaggtccgcaacattgtggacaatttctgccagacccacgaactggagttg
aaggagcagcatcaaagtgagcttctctctgttcggcaagagcttgagaagcaggttcag
acactaactgaggaaaatagagtaaaccagaatattgtcagagacgtccagcgcgcaatg
ctggagctggaggggcttatggagcgcaaagagaaagaaattactcagctcgagaatgag
agagagcgatgggttgaaacagagagtagccagacggataggatcaaaaacctggagcag
atgatcactgatcaggctgaagagattgagacactctcagcttcacgagactccctgact
agccagcttgagaatctgcactttgagattgaacgtggccaacagaagattcgacaagag
ctggaagttgttgagcaatctcacttaaaggaactggaggacagaatgaagcaagaacac
aaggcagaactggagaccattaccaaggataaccaggacgttctgaaacgtctggttgct
gaaaatagtgcaaagttaagtgaggcagctgatcaccatggtactgctcttagagaaaag
gacaaccaagtcaaggacttggaggctcgtattactgagtttgcagaacttcgctgcaaa
ctagaggtggaactagccctcaaagaatcagagacagaagaggtgcggctcttatttgag
gaggccaagattctgcaggctgaggctgtgaagtctcaggtagaggctgagaccaaagtc
tttagcgaggagctggcagatatcaaaaaacagcttcaggtaaaaaatgaggagtatgaa
gtggacctagcagagctgaggactctcatgaggattgagaaagaccactgcatctcagaa
ttggtggacagacacgaggaggagactattttgttgcgcaatgagctctcctccctgcag
cagcaagcccaagatgctgagaggaaccacgctgaacagcaacagaaactaaagcaggaa
ttagaccagcaagtggctttaagtgaagagaaaggaaaaaagttgtggagcttccaacaa
ggggagcaagagctgaggactgtcatcaataaattgcaggcagaatgtgatctgctttct
gaaaaactagagcaggagagacaagcagtcgagaaagatttagaaaaagaagaggccaac
aaggttgcttcaccagatgcctttaaagagttagagcagcagaaggaggagatagaaaag
agactgttacagaaaattaaaacacttgagaatgagcttcacgagagacaattctcaaaa
agtgatgaagggttgttgctgcatgctgacgggcatgcagatgccggagcacccctgtct
ctggattcagcactacaagagcggctgcagcaggagagggcctccctgcagtcccagatg
gagctcctggagaagaagaagaatgaggagatgcagaacctcaagacatcactaatcgca
gagcagcagactaatttcaacactgttctaacccgagagaagctgaagaaagagcagatc
atcaatgagctcacagagaagttgcggaaagttacccaacagcaggagaaggacaaagct
ctgatagagacactctctgaggaccgggctagtgtcatgcaggagaagaaacacttggaa
gaggagcttaatcgcctgcgcagcaccgcactggtctcctctgccttcttcactcctaac
ccgtcagctcaggaggtcacggaggctggagcagaagcagccagagctctgcctgttgct
ggggcctgttcttctgagcccatggctgaaactgacagactgacctctgtgggagccgtt
cgtgatgacgaacatgtggattcagcagtggaagccagcatggtgacagtccatgataat
attctgatgtcagaggagaaacagcggatacttttacttgagaggactttacacatgaag
gaagaggaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcgtctgtgtct
tcacgacattcagacaaaattgccatcagagactttcaggtaggcgatttagttctaatc
atcctggatgaaaggcatgataactacgtgctgttcacagtaggtcccaccctctacttc
ctccactcagagtctctcactgcactggacctcaaaccagcatcagggacctcaagacgg
ccgtgggtacttggaaaggtgatggagaaggaatattgccaggcaaaaaaggcccagaac
aggttcaaggttcctttaggaaccaagttctacagagtgaaagctgttccatggaacaga
aaagtataa
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integrated database retrieval system
