Xiphias gladius (swordfish): 120798941
Help
Entry
120798941 CDS
T07311
Symbol
si:ch211-13f8.2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl00514
Other types of O-glycan biosynthesis
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120798941 (si:ch211-13f8.2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120798941 (si:ch211-13f8.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xgl01003
]
120798941 (si:ch211-13f8.2)
Enzymes [BR:
xgl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120798941 (si:ch211-13f8.2)
Glycosyltransferases [BR:
xgl01003
]
O-Glycan biosynthesis
O-linked Gal type
120798941 (si:ch211-13f8.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120798941
NCBI-ProteinID:
XP_039999669
LinkDB
All DBs
Position
LG14:complement(10061009..10067493)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSSERVYELNAGSTNHAGRLFLHSGTDELPADHLLQPVQRESSPLKPTVLITILARNAQ
HSLPYFLGCIDRLDYPKDRIAIWAASDHSVDNSTAMLQEWLKGVQHLYHSVEWRPMEQPS
SYADEQGPKHWPDSRFTHVMKLKQKALSAARRLWTDYILFVDSDILLTNHQVLSDMMAEN
LTIVAPMLESRGLYSNFWCGITPQGYYRRTPEYIPIRKWKRQGCFGVPMVHSTYLLDLRR
TASQALAFHPPHPHYPYHLDEIMVFAFSARQAGVQMYVCNRDHYGYLPVPLKQDQTLEEE
EESFTHTLTEALIEYTLEPSQYVHTTHKEPGKMGFDEVFLINLKRRSDRRERMLSSLAVL
GINATLTEAVDGKALNSSQLQAMGIDMLPGYKDPYSDRVLTRGEIGCFLSHYGIWKQVVQ
QGLQQVLVLEDDVRFEHRFCSLLVAIMDNVMRVGLDWDLIYVGRKRLQVKEPEYWVKGVS
NLVHPGYSYWTLGYGLSLQGAKKLLQAKPLHKMLPVDEFLPIMFNKHPKDEYMQYFEQRD
LRAFSVEPLLLFPTHYTGEPGYFSDTETSTIWDDEAVDTDWDRDAAKHRREQETEELGFR
HVAPHSARGGVPPPSASRNRDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcggaacgtgtctacgagctaaacgctggctccactaaccacgcgggaagg
ctattcctgcactccggcacagatgagctgccagctgatcatctcctacaaccagtccag
cgagagtcctccccgctgaagcccacagtgctgatcaccatcctcgcgcgcaacgcacag
cacagcctcccttatttcttgggatgcattgacagactggactatccaaaggacagaatt
gccatctgggcagcctctgaccacagtgtggacaacagcaccgccatgcttcaggagtgg
ctcaaaggagtccagcacctgtaccactctgtggagtggagacccatggagcaaccaagc
tcctatgcagatgagcagggtccaaaacactggcccgactctcggttcacccatgtgatg
aagttaaagcagaaagcgctcagcgctgccaggcgactttggactgactacatattgttt
gtggacagtgacatcttgctgacaaaccaccaagtcctgtctgacatgatggcagagaat
cttacaattgtggcacccatgttggaatcaagaggtctttattccaacttctggtgtggc
attactcctcagggctactacagacgaaccccagagtatattcccatccgaaagtggaag
cggcagggctgctttggagtccctatggtgcactccacctacctgctggacttgaggcgg
actgcgagccaagcgttggccttccaccctcctcacccccactacccctaccatctagac
gaaatcatggtctttgctttctctgcaagacaagcaggggtccagatgtacgtgtgcaac
agggaccattatgggtatttaccagtgcccctcaagcaagaccagacactggaggaggag
gaggagagttttacacacacactgacagaggcacttattgaatacaccctggagccttca
cagtacgtgcacactacacataaagaaccaggaaagatggggtttgatgaggtctttctg
atcaatctgaagcgccgctcagaccggcgggagaggatgttgagttctctggccgtcctc
ggcatcaacgccacattgacagaggccgtggatggcaaagcattgaactcctctcagctg
caggccatgggtatagacatgctgcctgggtataaagacccgtattcagaccgtgtgctg
actagaggggagattggctgcttcctcagccactacggcatctggaagcaggtggtgcag
cagggactgcagcaggtgcttgtgctggaggatgatgtgagatttgagcacagattttgc
agtttgctggttgccattatggacaatgtgatgagagtcggactcgactgggacctgatt
tatgtgggtcgtaagcggctgcaggtgaaggagccagagtactgggtaaagggagtcagt
aacctcgtgcacccaggatactcctactggaccttgggttacggcctgtccctgcagggg
gccaagaaactcctgcaggcaaaacctctgcacaaaatgcttcctgttgatgagttctta
cctatcatgttcaacaagcaccccaaagacgagtatatgcagtattttgagcagagggac
ctgagagcattttcagtggagcctctgttgctcttccccacacactacaccggcgagcct
ggctactttagtgacacagagacgtccaccatctgggatgacgaggcagtggatacagac
tgggacagagacgcggccaaacaccgacgtgagcaggaaactgaggagcttggatttcga
catgtggctcctcattctgctcgtggtggcgtgcctcccccctctgccagtaggaacaga
gatgaactctga
DBGET
integrated database retrieval system
