Xiphias gladius (swordfish): 120799015
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Entry
120799015 CDS
T07311
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120799015
Enzymes [BR:
xgl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
120799015
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120799015
Prokaryotic type
120799015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
120799015
NCBI-ProteinID:
XP_039999756
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All DBs
Position
LG14:9769717..9775847
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AA seq
548 aa
AA seq
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MLRGIRRRRLLKLVVHSDRWPSSILSRLPESFTSETIMSDKKRKAASAPAGKEPNAKQQK
LGPMKAEKEERAGGWLQHLVKQQRSEKKDMKFNKKRLRFISDAEKIKQGSEGVLYWMSRD
HRVQDNWALIQAQRLAAKENLPLHICVCLVVPKSELSTLRHYSFMLKGLKEVAKECKALD
IQFHLLDGSAGEVLPGFVSDRSLGAVVTDFSPLREPLGWLEDVKKRLPESIPLIQVDAHN
IVPCWVASPKLEYSARTIRGKITNLLPEFLTDFPLVEKHPYTATRTAKPIDWDKILASLE
VDRAVGEPEWAKPGTMAGMAMLESFIDVRLKLFGTQRNDPNAAALSQLSPWIRFGHVSAQ
RMALQVQRSGKNASQSISSFIEELVVRRELTDNFCFYNKKYDSVEGAYEWAQKTLKDHAK
DKRPYLYTRQQLEKAKTHDKLWNAAQYQMVTEGKMHGFLRMYWAKKILEWTSSPEEALSI
ALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWAERPVFGKIRYMNYKGCTRKFDVPRFE
RKYCPKNL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcggcattaggaggaggcgactcttgaagcttgttgtccacagtgatcggtgg
cccagctcgattctctcccgcttgcccgaatcattcaccagtgaaaccatcatgtcagac
aaaaaacggaaggcagcgtccgctcctgctggtaaagagcccaatgccaagcagcagaag
ttgggtcccatgaaggcggagaaggaggagagagccgggggctggctgcagcacctcgtg
aagcaacaacggtcggagaagaaggacatgaagttcaacaaaaagcgcctccgttttata
tctgacgctgaaaagataaagcagggctcagagggtgtcctgtactggatgtcgagagac
cacagagtacaagataactgggcgctgatccaggcgcagcggcttgctgcgaaggaaaac
cttcctctgcacatttgtgtctgcctggttgtccccaaatcagagctgtccactctgaga
cattacagctttatgctgaaaggtctgaaagaagttgcaaaggaatgtaaagccttagac
atccagttccacttgctcgatggttcagcgggggaagttctccctggctttgtgtctgac
cgcagcctgggggcagtagtgacagacttttcccctctcagagagccactagggtggttg
gaggacgtcaaaaagaggctaccagagagcattcccctaatacaggttgacgctcataat
attgttccctgctgggtggcatcacctaaacttgagtactccgccaggacgattagagga
aaaatcaccaatcttttgccagagttcctcactgattttcctctggtagagaaacatccc
tacacagctacaagaaccgccaaaccaatagactgggacaaaatcctggcctccctagag
gttgacagagcagtaggagagccagagtgggctaagccaggcactatggcaggaatggcc
atgttggagtccttcattgatgtacgccttaaactgtttggcacccaacgtaacgaccca
aatgctgccgccctaagccagctctccccctggatccgctttggccacgtgtcagcccag
cgtatggctctgcaagttcagcgcagtgggaagaacgcaagtcagtccatctcctccttc
atcgaggagctggtggtgcgcagggagctgactgacaacttctgcttctacaacaagaaa
tacgacagcgtggagggtgcatatgagtgggctcagaagaccttgaaagatcatgccaaa
gataagaggccgtatctctacacgcgtcagcagctggagaaagcaaagacacatgacaaa
ctttggaacgcagctcagtaccagatggtcaccgaggggaagatgcatggtttcttgagg
atgtactgggccaaaaagattcttgagtggacttcttcaccagaggaggcgctctccatc
gccctgtaccttaacgatcgctatgagctggatggccaggaccctaatggatttgtcgga
tgtatgtggtctatttgcggcatccatgatcagggctgggcagagagacctgttttcgga
aagatccgctacatgaactacaaaggctgcactcgaaagtttgacgtaccccgatttgaa
cgaaagtactgtcccaaaaacctctga
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