Xiphias gladius (swordfish): 120799134
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Entry
120799134 CDS
T07311
Name
(RefSeq) neurocan core protein-like
KO
K06794
neurocan core protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120799134
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120799134
04091 Lectins [BR:
xgl04091
]
120799134
Proteoglycans [BR:
xgl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
120799134
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120799134
Lectins [BR:
xgl04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
120799134
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_2
Chordopox_A33R
EGF_CA
Ig_3
Motif
Other DBs
NCBI-GeneID:
120799134
NCBI-ProteinID:
XP_039999999
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Position
LG14:12791263..12823324
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AA seq
1237 aa
AA seq
DB search
MVLTLCAAGRQILFALMLLLCLGLVEASSLVNMRRITHPTVQQTLAGKAVLPCVFNLQTS
SSSQPPHLLWTRTRLPAGGQGASPEQIVLSAKGGVIKVNKAFSGRVMLSGYTANPLNATM
EISSLRTNDSGTYHCQVVMGNDYERDTVPLVVSGVVFHYQAPSARYALSFTDAQRACQEN
SAQIATPDQLWAAYYDGFASCAAGWLDDQTIRYSVQLPELGCYGHTEYSAGVRNYGKRDP
KELFDVYCFAKQLDGEVFHSSVPGRLSLSSASDRCVSLGGQLATVGQLYLAWRAGLDSCA
PGWLSDGSVRYPVTWPHPDCGGSQLGVHTITPNRTADNITALYDAYCYRAKVKNTGSISQ
IYTSLWKPWSYLTGLNDADSTGTTSPDLTTQQTTTTRGSSDGNDVSPSSWTGLVDLEKEA
ILHSADASTDPWSSESSGSYVTLQLIPGQSSLDWGELMEPGPDSEEFLRPPVHPTPAEKK
VISKIVKSIWKPWNYLVGTGDEEGTQAPIEQAGEEETATKKTDKESNPSFTASSGLFSWG
STWFSSPLKENTTPASEDSPTRLASTLAVSSIPMTTESTKGRENSETHTSTASSSTPEIT
SSSGDTWVHVEAETTTQPANKREETATSRASGRGGRGRGKKNRGEDRSRGEEKERGEEKG
KGEDEGSGEITGAEAKGDIQVSRRPVGTSKPRERSRERSRERGHRKGQSTAIPTTTTTTT
TTTSPLEPTVITTTGLESADYSTSKSLSALPIETPSPSVSLDPYPTLLASPSPSPSTSPS
PSVSPFMSFSQSSPSQSLFESQSPSPSPSLSSSPSPSPSSVSSQTPSLSPSPLSPSSHSP
SQMVGSGDPSPSPHSDNQDSSTNALTSLHWVPVEKAGLNSSLDYPHLLSGPPDEEEPAWS
HAVGSGALLPGNMEEESSRGSNVSSITLGPTIEVEPCVTNPCLHGGKCLPQGTGYSCYCP
QGYAGENCEIDVDDCQSEPCENGGTCIDKIDSFLCLCLPSYGGDTCEKDIEGCEHGWRKF
HGHCYRYFTHRHTWEDAEKDCREHSAHLSSVTSATEQEFINGLGHDNAWIGLNDRTVEED
FQWTDGNDLVYENWRESQPDNFFAGGEDCVVTIAHEDGKWNDVPCNYNLPYICKKGTVLC
GTPPAVENAHLIGRRRSHYDIHSVVRYQCSEGFYQRHIPTARCRADGSWERPRIICTKSR
RSHRYRRHHHNQHHERRSHRRHGGEGHKAREDAHSYY
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcactctctgtgcagctgggcggcagatcctctttgctctgatgctgctgctc
tgtttaggcttggttgaagcctcctccctagtgaacatgcgtaggatcacccatcctaca
gtacaacaaacactggcaggcaaagccgtcctcccttgtgtcttcaacctccagaccagc
tcctcaagccagcctccccacctcctgtggactcgcaccaggctgccagcaggaggacag
ggtgcttctccagagcagattgtgctctcagctaaaggtggcgtaatcaaggtgaataag
gctttcagtggccgtgtcatgctgtcaggatacactgccaatcctctgaatgctaccatg
gagatctccagtctccgtaccaatgactcaggcacttaccactgtcaggttgtcatgggt
aacgactatgagagagacactgtgcccctggtggtctccggtgtggtgtttcactaccag
gctcccagtgcccgttacgccctctcatttacagacgcacagcgggcctgccaggagaac
tctgctcagatcgccactccggaccagctgtgggcagcgtactatgacggctttgccagc
tgtgcagcaggctggttggatgatcagaccatacgttattctgtccagctgccagagctt
ggttgctatggacacacggagtactctgctggagtgaggaattatgggaagagggacccg
aaagagctatttgatgtgtactgttttgcaaagcaactggatggtgaggtgtttcactcc
tcagtcccaggcaggttgtctctgtcttcagcctcagaccgctgtgtgtccctcggaggg
cagctggccacggtggggcagctttatctggcctggagagccggcctggacagctgcgcc
ccaggctggctgtctgatggaagcgttcgctacccggtgacctggcctcatccggactgt
ggagggagccagctgggagtccacaccatcacacccaaccgcactgctgacaacatcaca
gcgctatatgatgcttactgctacagagctaaagtgaagaatactggctccatctctcag
atctacacctccctgtggaagccctggagctacctcacaggcttaaatgatgctgactct
acagggacaaccagtcctgacctgactacacagcaaaccaccaccaccagaggatcctca
gatggcaatgatgtttcaccttccagctggacaggattggttgaccttgaaaaggaagcc
attctacacagcgctgatgcttccacagacccctggtcctcagagtcctcaggatcctat
gtgaccctccagctaatcccaggacagagctccttagattggggagagctgatggagcct
ggtcctgattcagaggagtttctccgacccccagttcacccgactcctgctgagaagaag
gtgatctcaaagattgtcaagtccatttggaagccttggaactacctggtggggactgga
gatgaggagggaactcaagccccaattgaacaggcaggggaagaggagacagctacaaaa
aagaccgataaagagtcaaatccgtcctttacagcatcatcaggtttgttttcttgggga
agtacatggttcagcagtcccttgaaggaaaacactacaccagccagtgaagactcaccc
actcgtcttgcatctactttggctgtctccagtattccaatgactacagagagcacaaag
ggccgggagaattcagagacccacacgtccactgcctccagctctacacccgaaatcacc
tcatccagcggggatacctgggtccatgttgaagcagagaccacaacccagcctgctaac
aagagagaagagacagcgacctccagagcaagcggtagaggaggcagagggagggggaag
aagaacagaggggaggacaggagcagaggagaagagaaggagagaggagaggagaagggg
aaaggagaagatgaggggagtggagaaatcaccggtgcagaggcaaaaggggatatacaa
gtctcacgacgaccggttggaacaagtaaaccgagagaaagatccagagaaagatccaga
gagaggggtcacaggaaaggacagtccactgccatccccaccacgaccaccactaccact
accactaccagtcctctggagcccacggtgatcaccacaactgggttggaaagcgctgac
tactctacgtccaaatccctgtccgctttaccaatagaaaccccatccccgtccgtctcg
ttagacccatatccaacactgcttgcatctccatccccatcaccatcaacctcaccatca
ccttccgtctcaccatttatgtccttttctcaatcatcgccatctcaatccctgtttgaa
tcccaatctccctccccatccccatctctttcctcttccccctccccctctccatcctca
gtgtcttcccagaccccatccctctcaccctcacccttatcgccctcttcacattctcca
tctcaaatggttggatcaggagacccatctccatctcctcactctgacaaccaggacagc
tccactaatgccctaacgtcacttcactgggtcccagtggagaaagcaggtctgaacagc
tctctggattatcctcatttactgtcggggcccccggatgaggaggagcctgcttggtct
catgctgtgggctcaggggccctgttacctggcaacatggaggaggagagcagcagagga
tctaatgtcagttccataactctgggcccaacaatcgaggtggagccctgcgtgacaaac
ccgtgtctgcacggaggaaagtgccttcctcagggaacgggctacagctgctactgccca
caaggatacgccggggagaactgtgagattgatgttgacgactgccagtccgagccatgt
gaaaatggaggcacttgcatcgacaagattgattctttcctctgcctttgcctgcccagc
tacggaggagacacgtgtgagaaagacatcgaaggttgtgagcatggttggaggaagttc
cacggccactgctacaggtacttcacccacagacacacctgggaggatgcagagaaagac
tgcagagaacacagtgcccacctcagtagtgtcacgtccgctacggagcaggagtttatc
aatggtctcggtcatgacaatgcctggatcggactgaatgaccgcacagtggaggaggac
tttcagtggaccgacggaaacgatctggtatatgagaactggagggagagccagccggat
aactttttcgcaggcggcgaggactgcgtggtgaccattgcccatgaggacggcaagtgg
aacgacgtgccctgcaactacaacctgccctacatctgcaagaaaggcacagtgctgtgt
gggaccccgcccgcggtggagaacgcccatttgataggtcgccggaggtcgcactatgac
atccactcggtggtgcgctaccagtgctccgagggcttctaccagcgtcacatccccacc
gctcgctgccgggccgacgggagctgggagcgacccaggatcatctgcacaaagtcccgg
cgatcacaccggtacagacgccaccaccacaatcagcaccacgaacgccgcagccacagg
agacacggaggagagggacacaaggccagagaggacgcacacagctactactga
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