Xiphias gladius (swordfish): 120799251
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Entry
120799251 CDS
T07311
Symbol
yme1l1b
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1b isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120799251 (yme1l1b)
Peptidases and inhibitors [BR:
xgl01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
120799251 (yme1l1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
TIP49
AAA_22
RuvB_N
DUF815
FAD-SLDH
Mg_chelatase
AAA_lid_PRS2_C
AAA_17
AAA_33
IstB_IS21
nSTAND3
PhoH
AAA_7
AAA_28
AAA_18
Zeta_toxin
AAA_14
Motif
Other DBs
NCBI-GeneID:
120799251
NCBI-ProteinID:
XP_040000205
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Position
LG14:8322166..8330981
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AA seq
721 aa
AA seq
DB search
MFSLSMTVQPQVTVPLSHFINVLHSLKSSVGSSSSATCKSRKHKEHDSDSELHCAESMWN
LRELGLSDLGTQQLDELVNCVFPRLSTQEAPLPVSGQKAWRTSHLSTHSFFYNKHGFSCG
PMPMSAHVFSRQQPSPLQSICTELQHCPVLVQSRGFKTLKSKTRRLQTAFDRPVESEGFT
PSFMKGFLSRDKGIEVESLDSLLKNKNIPDGQQDAFKRGFAEGFLKAQALTQRTQDSLRR
TRLILLVLLLVGLYGISKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKNELQ
EVVEFLKNPQKFTALGGKLPKGVLLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF
VGVGASRIRNLFREGKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKP
NEGVIIIGATNFPEALDNALIRPGRFDMQVTVPKPDVKGRTEILNWYLKKIKVDQAIEAS
IIARGTVGFSGADLENLVNQAALKAAVDGKDMVTMKELEFAKDKILMGPERRSAEIDKKN
KLITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHVSMLPENDRWSETRSQLLAQMD
VSMGGRVAEEIIFGHEYITTGASSDFDSATKIAKMMVTRFGMCEKLGVMTYTDMTQQSPE
TQAAVEQEVRVLLKESYERAKALLKSHAKEHKNLADALLMYETLDAKEIQLVLEGKTLET
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgtcaatgacggtccaaccacaggtgactgtgcctctcagccacttcatc
aacgtcctgcactctctgaagagctcagtgggaagcagcagcagtgccacctgcaaatcc
agaaaacacaaggagcatgactcagactcagaactacactgcgccgagtccatgtggaac
ctgcgggagcttggattatccgacctgggaacacagcagctggatgagcttgtgaactgt
gtgtttccacgcttgagcactcaagaggcaccgcttccagtgagtggtcagaaagcctgg
aggacctcccatctttctacacactcctttttctacaacaagcatgggttctcatgtggt
cccatgccaatgtcagcccacgttttttccaggcagcaaccttcacctcttcagtctatc
tgcacagagctacaacactgcccagtgctggtccagagcagaggctttaaaactctaaag
agcaaaaccagacgactgcaaacagccttcgatcgccctgtggaatctgaggggttcacg
ccatcgtttatgaagggttttctttcccgtgacaaggggattgaagtggaaagtctagac
agcctgttgaagaacaagaacatacccgatggacaacaggatgctttcaagaggggcttt
gctgagggtttcctgaaagctcaagccttgacacaacgcacacaggactctctgaggagg
actcgtctcatcctgctggtgctgcttcttgttgggctctatggtatctccaaaaccccc
ttcctatcggtgcggttccgaaccacatcaggcctggactctgcagtggaccctgtccag
atgaaaaacgtgacatttgagcacgtcaaaggagtagaagaagctaagaatgagctgcag
gaagtggtggagttcctgaaaaacccacagaagtttactgcactgggaggaaagctgcca
aaaggtgtgctactggttggccctccggggactggtaagaccctactggccagagcggtg
gccggagaggcggatgtaccattctactacgcctctgggtcggagtttgatgagatgttt
gttggagtgggagccagtcgcatcaggaaccttttcagggagggcaaagccaatgctcct
tgtgtgatcttcattgatgaactggacagcgtgggtgggaaaaggatcgagtctcccatg
cacccttactccagacagactatcaaccaactacttgctgagatggatgggtttaaacca
aatgaaggtgtgatcatcattggagcaacaaacttccctgaggctttagataatgccctg
atccgcccaggacgttttgacatgcaggtgactgtccccaaaccagacgtgaaaggacgc
acagagatcctcaactggtacctgaagaagattaaggtggatcaagctattgaggccagt
attattgcccggggcacagtgggcttctccggcgctgacctggaaaatctggtcaatcag
gcagccttgaaggcagcagttgatggcaaagacatggtcactatgaaggagttggagttt
gctaaagacaaaattctcatgggccctgagaggaggagcgcagaaatagacaagaagaac
aagctcattacagcgtaccacgaatcgggccacgcaattgtagcttactacaccaaagat
gccatgccgatcaacaaggctactatcatgcccaggggccctagtctgggacatgtgtcc
atgcttccggagaatgatcgttggagtgagactcgctctcagttactggcccagatggat
gttagtatgggcggccgtgtagcagaggagattatatttggccatgaatacattacaacc
ggagcatcaagcgactttgacagtgctaccaagattgctaagatgatggtaaccagattt
ggaatgtgcgaaaagctgggtgtgatgacctatactgacatgacacagcagagcccagag
acacaagcagctgtggagcaggaagtcagggtgttacttaaggagtcttatgagcgtgcc
aaagccctgctgaagtctcacgccaaggagcacaagaacctggcagatgctctgctcatg
tatgagacgctggatgccaaagagatccagctggtcctggagggcaagaccctggagacg
agatga
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