Xiphias gladius (swordfish): 120799613
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Entry
120799613 CDS
T07311
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03015
mRNA surveillance pathway
xgl03040
Spliceosome
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120799613
09122 Translation
03013 Nucleocytoplasmic transport
120799613
03015 mRNA surveillance pathway
120799613
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120799613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120799613
03041 Spliceosome [BR:
xgl03041
]
120799613
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120799613
TREX complex
120799613
Spliceosome [BR:
xgl03041
]
Complex C
Other components
EJC/TREX
120799613
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120799613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
FYTT
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120799613
NCBI-ProteinID:
XP_040000769
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Position
LG15:29135565..29139158
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AA seq
254 aa
AA seq
DB search
MADKMNMSLDDIIKLNKKGGSGRGGRSSGSGGSSGWAGGSSRPVRSRQNNFNRERNNRST
PYTRPRELPDKWQHDMFEEHVSGRQVQSAGAERSVENSGKLLVSNLDFGVSDSDIKELFA
EFGALKKASVHYDRSGRSKGTADVHFENMADALKAMKHYNGVPLDGRPMKIQQVTSEVNA
HSRQSTQSSNRGFDRSRLGQPKTERRERGEKRQGGGSGGFRGRGRGGGNRPQLSAEELDA
QLDAYNAKFQMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatgaatatgtctctggacgacattatcaagctgaacaagaaaggaggc
agcggccgaggaggaagatcatccgggtcgggtggaagttcaggttgggccggtggatcg
tcgaggccagtgcggagtcgacagaataacttcaaccgtgagagaaacaacagatccaca
ccgtacaccaggcccagagagttaccagacaaatggcagcatgacatgtttgaggagcat
gttagtggacgccaagtacaaagtgctggggctgaaagaagtgtagaaaatagtggcaag
ctgctggtttccaatctggactttggcgtctctgactcagatatcaaggagctgtttgca
gagtttggggcattgaaaaaggcgtctgtacactatgaccggtccggtcgcagtaaagga
acagcagatgttcactttgaaaatatggcagatgcactaaaagccatgaagcactataat
ggtgtcccacttgatggacgccccatgaaaatccagcaagtgacgtcagaggtcaatgca
catagtagacaatccacacaaagttcaaacagagggtttgacaggagcaggctcggtcaa
cccaagactgaaaggagggaacggggtgaaaagaggcaaggtggcggcagtggaggtttc
agaggtcgtggaagagggggtgggaacagaccccaactttctgcagaagagttggatgcc
cagttggacgcttacaatgccaagtttcagatggacaccagttag
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integrated database retrieval system