Xiphias gladius (swordfish): 120799631
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Entry
120799631 CDS
T07311
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120799631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120799631
NCBI-ProteinID:
XP_040000787
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Position
LG15
Genome browser
AA seq
1569 aa
AA seq
DB search
MDNLTTVKAISSGGGAGGSSKGDLSPGASGSSGRAASGGSGGTSSSVLITSSSSCSNSFG
GSGASKGTGGISITTVGASSAVSSGGGSSAASGGSGAGARTGFRAAGGESSNMSSSFAIG
GREGKREGGLGAVTVSTVTKTSYSSGGSGEAKRGSSSVITYSPAPKERKSMTTMTASLSD
VFDESSSTNSSPEYNRKEYGGSIATSTSATRGRSQSRESEIRARLQSASPTASWTELDDV
KRLLRGNSSTSTSPIQSPTNTLPIPKKDSVETRTLSESSTIDHYGSIWSGGVSSRYSYNT
NPNNLSTTSTLYQLCSVPSCPGVQNNLTLSSPSVNSGLSVSSTVPVYGVQNNLASTSHVV
LSPTGTNTQIVYGVQKNVPGTGMSTTTVRPSSPIYDDASGKDVKFVLIEKENAPVKKATE
RLVVTKDTGKHFMSAAPASTSATYPEDSLKREKQNLSTSTMEEGTDIKSSTMKGATKDKA
TYADESGFGFCSCCSWWKWLLGLLLSLLFLLGLLFGLIALGEEVKRLKNRVDALEAITGT
ASARSSRLSASSGINIIDPLDSSYLDRSSSGSTLTRSDNAINLGAAGPGGGSGSGLGQDN
AALQRVVQQLVRAELRSDALRETLVYSLKGERGEPGPKGDPGALGQKGDSGFPGLPGPPG
QMGHPGLDGPRGPKGGSGEPGPEGPPGQRGREGPMGPRGESGPPGFGEKGVKGSQGEPGR
PGPAGAAGAVGPKGATGEPGVSGNPGVPGPKGFQGEAGAPGAKGDRGTPGPPGTKGEQGE
RGPRGLTGEPGQPGTQGPAGPKGSKGIAGDTGLMGIPGVRGPPGLPGDVGPPGTPGLQGP
PGIAGNPGQPGSKGEPGSPGKVITPIGSDTVAIPGPPGPTGPPGPAGSPGLSGPIGPAGV
PGQPGEKGEKGEKGERGEQGKPGEPGSRLPGPPGPPGPPGAPGVQGPPGETKQGPPGRRG
PPGEPGVGLPGPQGEKGEPGSFVPTSETFFAGPPGLPGPPGPQGPQGYQGEPGQPGLPGS
PGETGVGQPGPRGPQGPVGPSGPQGLPGPQGPEEPQGRKGDAGEPGVTGIPGVSSVPGSS
FSPGPPGPPGPPGPPGRDGSGIGSTDVGQYIAEYLQSGSIREYLVGPPGPPGIPGAPGTA
GDELVNDLANRVITYIQSSGRGYDGTPGPPGPPGPTGSTSVSDIIDLLQREEVRRYVAGP
PGPPGPPGAPGLGSYRFNTQEVAERVLSLMNERGMVGVPGPPGPPGPPGLPGNLLSTGYQ
ALVGPQGPPGPPGVPGSQGPRGKAGPPGPPGSGNYISSDIHDYLQSVAFRGPPGPPGPPG
PPGPEGPRGAIRGLVSYSEHANRESLTAEQQEYVKSEFNDGVRGGMFGLPGPPGPPGHKG
EPGVPGTRDWNLDTGDYSSMAVRVTDYIKSRGVLHDIVREYNSRISKGPPGPPGPPGPPG
YSRWFGSRENATELLEYMKSHGLLHDIQRNHDERVIQGPPGPPGPPGPPGYSRLFGSQAN
VTDLVEYIKTHGAIVGPPGRPGQKGDMGFPGLKGEKGERGLPWLEGHKEQKGERGEFIMT
KRRKGNGGV
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctaactacagtcaaggcgatcagttctggtggaggagccggaggaagtagc
aaaggtgatctttctccaggtgcaagtgggtctagtggaagagctgcatcaggaggctct
ggtggcacaagcagttcagttttgatcacatccagcagctcctgttccaacagtttcgga
ggatccggagcaagcaagggtaccggaggcatcagcatcactactgtaggagcatcctct
gctgtatcctcaggtggagggagttcagcagcttctggaggctccggggcaggggcaagg
acagggtttagggctgctggaggggagtcctctaacatgtcctctagttttgcaatcggc
ggcagagaaggaaaaagggaggggggtctgggtgctgtgacagtttccacagtgaccaag
accagctacagttcaggtggatccggggaagcaaagagaggatcgtcctctgttatcact
tattcacctgctccaaaagagaggaagagcatgaccaccatgacagcatctctctcagat
gtctttgatgaaagttcaagcacaaactcttctccagagtataacaggaaggagtatggc
ggttcaattgcaacttcaacttctgccaccagagggagatctcagagcagagagagtgag
atcagagccagactccagagtgcttctcctacagcaagttggacggagctggatgacgtg
aagcgtctgctgagaggaaacagctccaccagcaccagccccattcagtcccccaccaac
accctgcccatccccaagaaggacagcgtggaaactaggaccttgtctgagagctccacc
atagaccactatggcagcatttggtctggaggtgtgagcagtagatacagttacaatacc
aaccccaacaacttgtccactacctccaccctttatcaactctgttctgttccgtcatgt
ccaggagttcagaacaacctgacactcagttctccctctgtgaacagtggactctctgtg
agcagcactgttccagtgtatggtgttcagaataatctggctagtaccagtcacgttgtc
ctctctcccactggaaccaacacacaaatagtttatggtgtgcagaaaaatgtaccaggc
actggaatgagcacaaccacggtgaggcccagcagtcccatttatgacgacgcctcaggc
aaagacgttaagtttgtgctgatagaaaaggagaatgctcctgtcaagaaggcgacagag
agactggtcgttaccaaagacacaggaaagcacttcatgtctgctgcacctgctagtact
tctgcgacctaccctgaggactcactgaagagagagaaacagaatctatcaaccagcaca
atggaagaaggaacagatattaaatcttcaaccatgaaaggtgccacaaaagacaaagcc
acatatgcagatgaatcaggctttggcttctgctcctgctgtagctggtggaagtggctg
ctgggcctcctgctcagcctgctcttcctccttggacttctcttcggactcatcgctttg
ggtgaggaagtgaaacgcctcaagaaccgtgttgatgctttagaagccatcactggcact
gcctcagccaggtccagtcgcttgtcagcctcttcaggcatcaatatcatcgacccactg
gattcgtcctaccttgacaggagttcctctgggtccaccctgacccgctctgataatgca
atcaacttgggggccgctgggccaggaggaggctcagggagcggactgggacaggacaat
gctgccctgcagagagtcgttcagcagctggtcagggctgagctccgctcagatgcttta
agagaaacacttgtatactctctaaaaggagagagaggagagccaggacctaaaggggat
ccaggggcactaggacaaaaaggtgatagcggctttccgggcctgccaggtcctcctggg
cagatgggtcacccaggattggatggaccaaggggaccaaagggaggttcaggtgaacca
ggtcctgagggaccaccaggacagaggggtcgagaagggccgatgggcccccgtggagag
agtggacctcctggttttggagagaaaggagtcaaaggatctcaaggtgagccaggacgt
cctggtcctgctggtgctgctggagctgtggggccaaaaggtgccacaggagagcctggt
gtctcaggaaaccctggcgttcctggtccaaagggtttccagggtgaagcaggagctcca
ggagcaaaaggtgaccgaggaactccaggaccgccaggaaccaaaggagaacagggagag
aggggaccacgtggactcacaggtgaaccaggacaaccgggaacacaaggccctgctgga
ccgaagggatctaaaggaattgcaggtgacacaggtttgatgggaattcctggtgtgaga
ggaccacctggacttcctggagatgtcggtcctccaggcacccctgggcttcaaggaccc
ccgggtattgcaggaaatccaggacagcctggtagtaaaggtgaacctggttcgcctggt
aaagtcatcactcctattggctctgatactgtggccatccctggacctccagggcccact
gggcctccaggccctgctggatcccctggtttgtctggtcccattggccctgctggtgtc
ccaggacaacctggggagaaaggagaaaaaggagaaaagggagagaggggagagcaagga
aaacctggcgaacctggcagcagactccccggtccaccaggaccaccaggtccacctgga
gcacctggtgttcagggtcctcctggtgagactaaacaaggtcctccaggacgcagaggt
cctccaggagagccaggtgttggtttacctggaccccaaggagagaaaggcgaacctggc
agctttgtgcctacatcagagaccttctttgctggaccaccaggtcttccaggaccccca
ggcccacaaggaccacaagggtaccaaggtgaaccaggccaaccaggtcttccaggaagt
ccaggggaaactggtgttggtcagcctggacctagggggcctcagggaccagtgggccca
agtggccctcaaggtctaccaggcccacaggggccagaggagccacaaggacgtaaaggt
gatgcaggagagcctggtgtcacaggcatcccaggagtatctagtgtaccaggcagttca
ttcagtcctggccctccaggcccacctggaccacctggtccacctggaagagatggaagt
gggattggatcaactgatgtgggccagtacattgcagagtaccttcagagtggtagcatc
agggagtacctagttggacctcctgggcctcctggtattccaggagccccagggacagca
ggggatgagctggtgaacgatttggccaaccgagtcatcacctacatccagagttcaggt
agaggatatgatgggactcctggcccccctggtcctccaggtccaactggttccacctct
gtcagtgacatcatcgacctgttacaacgggaggaggtgaggagatatgttgctggtcct
cctgggccaccaggacctccaggagctccaggccttggcagctacagatttaacacccag
gaggtggctgaacgagtcctcagtctcatgaatgagagggggatggtaggtgtccctgga
ccccctggacctcctgggcctcctggtcttcctggaaacttgttatcaacagggtatcaa
gcacttgtgggccctcaggggcctcctggtcctccaggtgttcctggttcacaaggacca
cgtggaaaggccggaccacctggccccccgggatctgggaactacatcagctcagacatt
catgactacctgcaaagtgttgccttcagaggccctccaggccctccaggcccccctggt
ccccctggacctgagggccctcgtggtgcaatccgtggactggtttcctatagtgagcat
gccaacagagagtcactcacagcagaacaacaagaatatgtaaagagtgagtttaatgat
ggtgtgagaggaggtatgtttggactgccaggccctcctggacccccaggacacaaggga
gaaccaggtgtgcctggcaccagagactggaacctggacactggtgactactccagtatg
gctgtcagagtaactgattacatcaaatctcgcggtgtgctgcatgacattgtgagggag
tacaacagtcgcatctccaaaggacctccaggaccgcccgggcccccaggtcccccagga
tacagccgatggtttggttcacgtgaaaatgccacagaattgctggaatacatgaaatcg
cacggtctgcttcatgacatccagcggaatcatgatgaacgcgtcatccaaggaccacct
ggaccacctggtcctccaggtccaccaggatacagccgattgtttggttcccaagcaaat
gtcactgatttagtggaatatataaaaacacatggagccattgtaggaccacctgggaga
ccgggacagaaaggggacatgggatttccaggcctaaaaggagagaaaggtgaacggggc
cttccgtggcttgagggacacaaagaacaaaagggtgaaagaggagaattcataatgact
aaaagaaggaaggggaatggcggtgtttga
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