Xiphias gladius (swordfish): 120799633
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Entry
120799633 CDS
T07311
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120799633
Membrane trafficking [BR:
xgl04131
]
Protein recycling
Others
Others
120799633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
BNR_6
Motif
Other DBs
NCBI-GeneID:
120799633
NCBI-ProteinID:
XP_040000788
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Position
LG15:complement(30448464..30598237)
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AA seq
1345 aa
AA seq
DB search
MEKDSRNIILDPSVWILSSSPIRAELHLIKSFNLDHLGSAALFTILHLGNATTCAAVPLP
QQSNNKHPGKAERGVGKKDFLHPQHPSLLPAMETGVIFCPKCHSALWFLLLLMFCFFQTA
KTEITCRSCQPGNKWRAQELLLKFDISESSAAGLKGEVFGHGDGAAARAGAVSAESRRLR
CAAGSAECAPDRAEYTEPRLKRNAGNLRAKDDIAESEFAEIKVSYVKMIGQQRTGGSAGF
TSSTQHTRRTRRNSADDKVRSPDSDQSQDPGESTSSAAGRRVRSSELRWSGEERRAGGSR
QEELKLNSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYG
ATYKKLNDKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYI
LSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHL
ETSISEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPIYYVSA
KRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNETYNLYVSDTLGVYYTLALEN
VVSSMGPEGNVMVDLYEVAGIKGMFLANKRTDNQVKTHITYNRGRDWRLLQAPSKDLRGN
SIYCVLPYCSLHLHLHVSANPYTSGNIASRDSAPGIIVASGSIGSELTTSNVSVYITSDA
GNTWRQIFDEEYAVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRQWNKYSFTNTPLFVDG
VLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEEDYQTWHLHNQGEPCLMGV
KRIYRKLKPTSRCVMGKTYSVTMTSGPCDCTEADFECDYGYERRSDGKCTPAFWFHPSSM
SRGCTSGMTFLNSTGYRKVVSNNCTAGVSVEYTARRQPCPFQAPKGLHLVTSEGTLTATL
GTNVTFLIFLEEGDGAKTSITLDFGDGHALTYSNVSSIEDGIKHIYKAVGIYRVTATGEN
NLGSETAMLYLHVTCQLEYIHLSAPFVAVRNKEVNLTAVLWPSQVGTVTYTWWIGNNTEQ
PVITLEGSVACTFSREGLNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNP
DVAEWRLDVSRVIKNSLIQATGVREDQLLVTVLPGLPTAAEFFLLPDKLLTEGKPEKSSA
HLDQLSEVLLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVV
VGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMMSPANPIEATPNSQRDLVHSLEILDTEF
NSQPIGCMKPHVHVKFSTELPTYIV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacagtcgcaacattatcctcgatccctcagtctggatcctcagctcctcc
cccattcgtgcagagcttcatttgatcaaatccttcaacttggaccacttaggctcagcc
gcactttttacaatactgcatttgggcaacgccacaacttgcgcagcagttcctcttcca
cagcagagcaacaataaacaccccggaaaagcagagagaggagtgggtaaaaaggacttc
ttgcatccacaacatccttctctgctgccagcaatggagacgggggtcatattttgccca
aagtgtcacagtgcgctttggtttttgcttttgctgatgttctgtttttttcagaccgcc
aaaactgagataacttgcaggtcatgccagcctggaaataagtggcgtgcacaggaatta
ctactgaaatttgacataagtgaatcctcagcagcagggttgaagggagaagtttttgga
cacggagacggagcagcagcgagagccggggctgtaagtgccgaaagtcggcggctccgt
tgtgcagcggggtccgctgaatgcgctccagatcgggcggaatacacggagccccggctg
aaacggaacgcaggcaacttgcgagcaaaagatgacattgctgagagcgagtttgcagag
attaaagtttcatatgtcaaaatgattggtcagcagaggaccggcggtagtgccggtttt
acctcttccacccaacacacaaggcgcaccagaagaaacagtgctgatgataaagtcaga
tcccccgattcagaccaaagtcaggacccgggagagagcaccagctcggcggctggacgc
agagtaaggagctctgaattgcgttggagcggagaggagcggagagccggcggttcgagg
caggaggagttaaaacttaatagttcgacgttcgctttgaccggagattcatctcacaat
caggctatggtgcactggtccggacagaacagcagtgtgattttgatgctgaccaaacta
tttgacttcaacctaaacagtgtgactgagagttcattatggaggtcaaccgactatgga
gcaacgtacaagaagctgaatgacaaagtcggcgcaaagacaatactgagttatttgtac
gtgagccctaacaacaagagaaagatcatgctgctaactgatccagaggtggagagcagt
ctactgatcagttcggatgaaggagcaacctaccaaaagtaccggctgaacttctacatt
ctcagcctgctcttccaccccgagcaggaggactggattctggcctacagccacgaccaa
aagctctacagctcagtggagtttgggaggaggtggcaactggtgcacgagagagtggct
cctaatcgtttctactggtcgaaaatgggtttggacaaagagccgggcttaattcaccta
gaaaccagcatctctgaaggacaagcactgtatgtcacctgcaagctgcagaactgcaca
gatgccaacaagggcaaaccattccctggctacattgaccccaattctctggtggtgcaa
gatgagtatgtgtttgtccaggtatcaaccgcggggaggccaatctactatgtgtctgct
aaaagagatgtctttacccccatgaagctgcctaagtacaccttgcccaaggacctgcat
gtgatcagtacagatgaaaatcgtgtggtggcagccgtacaggagtggaaccagaacgaa
acctacaacctgtatgtgtcggacacgttgggggtctactacactctggctctggagaat
gtggtcagcagcatgggccctgagggcaatgtcatggttgatctctatgaggtagcagga
ataaaagggatgttcctagccaacaaaaggacggataaccaagtaaagacgcacatcacc
tacaacagaggcagagactggaggctgctgcaggccccgagcaaagacctaaggggcaac
agcatttactgcgtgctaccatactgttcattgcatctccatcttcacgtgtctgcaaat
ccctacacttctggaaacatagccagcagggactcggccccggggatcattgtcgcatca
ggatcaattggctcagagctgaccacaagcaacgtcagtgtgtatatcacttcagatgca
ggaaacacatggagacagatcttcgacgaggagtatgctgtgctctatctcgaccaagga
ggtgccttagttgcaataagacatactccacttcccatccgacacctgtggttgagcttt
gacgaaggacggcagtggaacaagtacagcttcactaacacacctctgtttgtggatggg
gtgctgggagagcctggggaagagactctcatcatgacgatttttggccacgtcagtcat
cgctcagagtggcagctggtgaaaatagacttcaggtccatcttcaacaggaggtgtaca
gaggaggattatcagacgtggcacctgcacaaccagggtgagccgtgcctcatgggagtg
aaaagaatctaccggaaactgaagcccacgtccaggtgcgttatggggaagacgtactct
gtgacgatgacgtcaggcccctgtgactgcacagaggctgactttgaatgtgattatggc
tacgagagacgaagtgatggcaagtgcacccccgccttttggttccatccatcatcgatg
tccaggggttgtacctcggggatgactttccttaatagcactggctacaggaaagtggtc
tcaaataactgtacagctggagtcagtgtggaatacacagccaggaggcaaccgtgtccc
tttcaagcacccaaaggtctccacctggttaccagtgagggaacgctgacagccacatta
ggcaccaatgttaccttccttatttttctggaggagggtgacggggcgaagacaagcatt
acactggacttcggagatggccacgctttgacatactccaatgtgagctccattgaagat
gggattaaacacatctacaaagctgtgggaatctaccgggtgactgccactggggagaac
aacctcggttcagagactgccatgctctacctgcatgtaacatgtcagctggagtatatc
catctctcagctccctttgtggcagtgaggaataaggaagtgaacctgactgctgttctg
tggcccagccaagtgggaacggtcacctacacctggtggatcggcaataacacagagcag
ccagtaatcaccctagagggaagtgtagcatgcacgttctcccgggaaggcctcaataca
gtcactgtgcaggtgtctgcagggaatgctattctgcaggacagaaaaaccattgctgtc
catgaatatttccgatctcatctgcttgccttttcatcaaaccttgatgaccacaaccct
gatgttgcagaatggaggctggatgtgagccgagtcatcaagaactctctgatccaggct
acaggcgtgagagaagatcagcttctggtcacagtcctcccaggtttaccgaccgcagct
gagtttttcctcctacctgacaaattgttaactgaggggaaaccagagaagagctctgct
catttagatcagctctctgaggtcttgctcagtgccttgaatcaaaaccttgtccagttc
acattgcggccaggggtccaagtcactgtgtatgcagcacacctatcagcagcgccccta
gtggacaccagtgagaaccacagtggctctgccatgctaatgctgctatcagtagtggtt
gtgggtttagctgtatttgtcatctacaaattcaagaggaagatcccaggcctcaacgtc
tatgcgcagatgcagaatgaaaaagaacaagaaatgatgagtccagctaatccaatagag
gccacgcccaactcacagcgggacttggtgcattctttggaaattctggacacagaattt
aactcacagcccatcggatgtatgaaacctcatgtacatgtgaaattctccacagagctc
cccacatacatcgtctga
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