Xiphias gladius (swordfish): 120799883
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Entry
120799883 CDS
T07311
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04144
Endocytosis
xgl04530
Tight junction
xgl04810
Regulation of actin cytoskeleton
xgl05100
Bacterial invasion of epithelial cells
xgl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120799883 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
120799883 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120799883 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120799883 (arpc1b)
05100 Bacterial invasion of epithelial cells
120799883 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120799883 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120799883 (arpc1b)
Membrane trafficking [BR:
xgl04131
]
Others
Actin-binding proteins
Arp2/3 complex
120799883 (arpc1b)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120799883 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
eIF2A
Beta-prop_TEP1_2nd
RMC1_N
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120799883
NCBI-ProteinID:
XP_040001297
LinkDB
All DBs
Position
LG15:8983454..8989524
Genome browser
AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGTWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSGAADQTSGGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVNSLSSETLPLLCVTFITENSLVAAGHDCYPVLFVYDGASGSLKFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTEKDLNSLHKNSISQISVLEGGRNQCAKFCTTGMDG
GMGIWDVKTLESAMKNLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccatagtttcctgctggaaccaattagctgccatgcctggaacaaagatcgg
acccagatcgccctctgccccaacaaccatgacgtccacatctacaagaaagacgggacc
aagtggaccaagattcatgagctgaaggagcataatgggcaggtgacaggtattgactgg
gctccagacagtaaccgtatagttacttgcggagcggaccgtaacgcctacgtgtggacc
cttaaagagggcacctggaagcccaccctggtcattctcaggatcaatcgcgccgcccgc
tgcgtgaagtggtcaccaaaagagaacaagttcgccgtgggcagcggctctcgtctcatc
tccatctgctactttgagcaggaaaatgactggtgggtgtgtaagcacatcaagaagcca
atccggtccaccatcctcagtctggactggcatcccaacaacgtcctgctggctgctgga
tcctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaggaaaagcct
ggccccactccctggggcagcaagatgcctttcggggagatgttgtttgagtctggaggg
tctggagctgcagatcagacttcaggaggaggaggtggttgggtgcacagtgtgtgcttc
tcacactccggcaaccgcctggcctggacctcccatgactccactgtgtctgtcgcagag
gggggcaagaccggcacggtgaacagtctgagctctgagacacttcctcttctgtgtgtc
accttcatcactgagaacagcttagtagcagctggccatgactgttacccggtgctgttt
gtgtacgacggtgccagtggcagcttgaaatttggtggcaagctggacgttcctaagcag
gcggcccagaagggcatcagtgccagggaacgtttccagaacctggaccgtcgggcctca
gagacccagagcaccgagaaggacctgaacagcctgcacaagaacagcatcagccaaatc
tcagtgctggaaggaggacgaaaccagtgcgccaagttctgcaccaccggcatggatgga
ggaatgggcatctgggatgtcaagactctggagtctgcaatgaagaacttgaagatagtc
tga
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