Xiphias gladius (swordfish): 120799890
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Entry
120799890 CDS
T07311
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120799890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgl03009
]
120799890
Ribosome biogenesis [BR:
xgl03009
]
Eukaryotic type
Pre-60S particles
RNases
120799890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
RRM_5
DUF8145
Umbravirus_LDM
Motif
Other DBs
NCBI-GeneID:
120799890
NCBI-ProteinID:
XP_040001310
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Position
LG15
Genome browser
AA seq
834 aa
AA seq
DB search
MQQCLCLSHVFITSTSGEKFGTSWTNNIRRNISLNMEPSSSAATSNRQKRKNIAPTAHEK
AKRLKTEQEGEGAVECAHPTRSPRISVLPGRLQQPITLNELTELLHYAALGKAGGIRQPS
WCRLRHQRKVKGVNVVVVEGLTQSHFYKHYLTLPHLRTKYNSRLTFTASSDNVVSGIFSS
EVPTSDAPSLSQIHTENSELHKALTHHPVITKFGTRRRGLTAYVLTQEEMIKRHYPVKGM
PGFEEFVCTDCVDCVTDSSPLYGLDCEMCLTEKGNELARVSLVDSDGNCVLDELVKPQNR
ILNYLTKFSGITAAMLRPITTTLRDVQAKLRALLPRDAVLVGHSLNNDLVALKLIHQHVI
DTSLLYRREFGQRFKLKVLAETVLKRQIQTEEKKGHNPIEDAVAALGLAQYFIKTGPRKV
VEHHLEELWGYTIEEESTDRASAPTPSHRFADMLQRVGRSVAYLGKRSDDVALDLSNQQW
HNSDKEVLASFRRQNKCPFLSVLQFSSFSDHPKGCVVHQQQQYQRVCVNLRDMCVVFAGP
LPAGFSEREVKRLFCCCGPVRRIKMLNTTARVHAEVEFELLEGAKLALKTLNGLNLQGQS
IEVKRPVHESILDLDLTLDALMGDALNASHLYAVKLKPSMAERINISARVNGHTLDAECP
GVTSVKTANGLPPPKVNGKRLRLTTAKPELSEETVRETFGRFGTVERIVLPAKPGKRARH
AHIKFESPEGTRAALSAADDLWKEDYIICPSLTPPHLRSWVAMTTAGAEGEAEERTHRHT
GSRDQEMQLMMGKLDRRLGKLFRSLPDGTLSVVMLLGHTSAHGHLPGLCFMEVK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtgcctgtgccttagccatgtgtttataacctctacaagtggtgagaaattt
ggaaccagttggaccaataacatccgtagaaacatcagcttgaacatggagccttcatca
tcagcggcaacaagcaacagacagaaaagaaagaacattgcccccacagcacatgagaag
gccaagagattaaaaactgagcaggaaggtgagggggcggtggagtgtgcacatccgacc
cgctcgccgcggatctctgtgctgcccggccgcctccaacaacctattacactgaatgag
ctgacagagctgctgcattatgccgccctggggaaggcaggtggtatcagacagcccagt
tggtgtcgtctccgccaccagaggaaggttaaaggtgtgaatgttgtcgtcgtggagggt
ctgacccagagtcacttttacaaacactacctcaccctgccacacctcaggaccaagtac
aactctaggctcaccttcactgcatcatctgacaacgtagtgtctggaatcttcagcagt
gaagttcctacatcggacgctccatcgctttcccagatacacacggaaaacagtgaatta
cacaaagcactgacgcatcacccagtgatcaccaagttcgggacccggaggagagggctg
acagcgtatgtgctcacccaggaggagatgatcaagagacactaccctgtcaaaggaatg
ccgggttttgaggaatttgtgtgcacagactgtgtcgactgtgtgactgacagcagccct
ctatatggacttgactgtgaaatgtgtctaacagaaaagggaaatgagctggctcgtgtt
tctctggtggatagtgatgggaactgtgtgctggacgagctggtgaaacctcagaaccgc
attctcaactacctcaccaagttctctggcatcaccgcagcgatgttgcgaccgatcacg
accaccctgcgggacgtccaggcaaagctcagggcgctgttgccgcgggacgctgttctg
gtcggccattcgctcaacaacgacctcgtggctctgaaactgatccaccagcatgtaatc
gacacatcactgctgtacaggagagagttcggacagaggttcaagctcaaggtcctggcg
gagacggtgctgaagaggcaaatacaaactgaagagaagaagggtcataatcccatcgag
gatgctgtggcagccctggggctggcccagtactttattaaaacaggacctcggaaggtt
gtagagcatcatctggaggagctgtggggatacacaatagaggaggagtccactgaccgt
gcatctgcgcccacaccgagtcacagatttgctgacatgttacagagagttggccggtca
gtggcctatttagggaagcgctctgatgacgtggccctggatctgtccaatcagcagtgg
cacaactctgacaaagaggtgctggcctctttcaggagacagaacaagtgtccgttcctc
tcggtgctccagttctcttccttctcagaccacccgaaggggtgcgttgttcatcagcag
cagcagtaccagagggtgtgtgtaaacctacgcgatatgtgtgtagtatttgcggggccg
ttgcctgcaggtttctccgagagggaagtgaagcggcttttttgttgctgtggaccggtt
cggaggatcaaaatgctgaacacaactgccagggtccatgctgaggtagagttcgagctg
ctggagggagctaagctggctttaaaaactttgaatggacttaatttgcagggacagtcc
atcgaggtcaagaggcctgttcacgagtcaattctggacctggatctgactcttgatgct
ttgatgggtgacgctctcaacgccagtcacctctacgccgttaaattaaagcccagtatg
gctgagcgcataaacatttctgcaagggtcaatggacacacattagatgcagaatgtcca
ggtgtaacttctgttaaaacagcaaatgggttgcccccccctaaagtaaacggtaaacgg
ttgcggctcaccaccgcaaagcctgaactgtctgaggaaacagtcagagagacatttggt
cgctttgggacggtggagagaatcgtcctgccagccaaacctggaaaacgtgcaagacat
gcacatataaagtttgagagtccggagggcacgcgtgcagccctcagcgccgctgacgat
ctctggaaggaggactacatcatctgtccatccctgactccgccccacttgcgttcgtgg
gttgccatgacaacagcgggtgctgagggggaggctgaggagaggacccacaggcacacc
ggttctcgggaccaggaaatgcagctcatgatggggaagctggaccgccgcctggggaag
ctcttcagatccctcccagacggcaccttgtctgtggttatgctgcttggacataccagt
gctcacggtcaccttcccggtttgtgcttcatggaggtcaagtag
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