Xiphias gladius (swordfish): 120799913
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Entry
120799913 CDS
T07311
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120799913 (helz)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
120799913 (helz)
3'-5' decay
Other 3'-5' decay factors
120799913 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
PAM2
ResIII
zf_CCCH_4
AAA_22
AAA_16
zf-CCCH_4
AAA_5
TPR_1
SpoIIP
DUF4746
Motif
Other DBs
NCBI-GeneID:
120799913
NCBI-ProteinID:
XP_040001363
LinkDB
All DBs
Position
LG15:complement(21337036..21396865)
Genome browser
AA seq
2081 aa
AA seq
DB search
MADRRAEKSCEEASRSLVRREYEAAVSHSTDALVVLAPSSGAPVPPSPPSLVATGPLRSR
ALLYRIAAFLQLKNYDEADEDCKHVLVEEIARGDGSIQASLRSMLLDGSLQEVASILSKA
LYGEPMNGIVAKDLTRLKMLLSEIEAINRGMAPEYTDDQEEEVQDGWQFRPPPRGVTSSE
EYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYMETL
IEKWMNSLSPEKVLSDSLEGVNVETSSSLSVTVTTKKSSHSWTFSLLCKPARKLYRIALL
YDAHRPHFFITGVSAGDRLQAVQKGCQEWTPGEETALATDNGLDNCFYKVAVSFSTEIFG
TFRQTVVFDFGSEPVLMQRIMVDAASIEDLEHLMAARQQLLMTAKRWDSSCKTIVEFSPN
ETMAELERSLLSRYQIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKEVSKF
NIKVNLQLVTSFMLTGISVGAKYAQNGQLFARFRLTETLSEDTLAGRLVMTKVNSVLLLP
LGREGVSCQPPPGVKERVYEAVIEEKTKEYIFLRICKDCCEELGLQPDREIQVELQFQLN
RLPLCEMHYALDRIKDNTILFPDISLVPTIPWSPNRQWDEQLDPRLNAKQKEAILAITTP
IAIPLPPVLIIGPYGTGKTFTLAQAVKHILRQDHSRVLICTHSNSAADLYIKDYLHPYVE
AGNPHARPLRVYFRNRWVKTVHPVVQQYCLISGTQVTFQMPTREDILRHRVVVVTLSTSQ
YLCQLDLEPGLFTHILLDEAAQAMECETIMPFALASKTTRIVLAGDHMQLSPFVYSEFAR
ERNLHVSLLDRLYEHYPREFPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPSHKD
FYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEELRKKWPVAWGKLDEGSIGVVSPY
ADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLV
EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFISICHENSS
LHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPLQGHHSSSQALHPHHHPHPQHA
QPTSNKQVPQQQQQQQQQQQQQQQQQQLQQQQQQQQQQSPPKGKHANHTEHLPPEGYVQP
NPAVLMGNPIRAFTPPLGGTPAGMGKSPSPVQRIDPHTGTSILYVPAVYGGNMVMSMPLP
LPWPGYQNRFAVDPRIMSHPAAMAYNFNLLQAQNRGSPIPYSGVAHPSPLGMGQPSPDKE
LQADPIRNGKLEGCPKSEQSRLQTPERKTADMKEKQGDLDTGQSRSLDPQTDGLVGFPNA
LLHRKDPSAAQRPLSYHLAPPSQAFPPHPASGRPFPPQYPVSRLPYRVSQPQHPGLAQQS
QQQQQQLSPAYTSGSHNASFFSGPIPAHRAVQSPTLDGLDSGGVEEMSSSIRTPMGHPGG
HHPGLSQHNRVNSFGEDGQDGSLGDGLDLQGPLALEALSQQQQQQQAARLGQWGEAAGPF
LQGGVAFPLPQQLTHLAQPGMARIPHQLLRAASWGLSANMEDEAVSSASTGPPYTRYPGL
LREMPPQEQAEPREAAEMQPPPQSRLLQYRQTQSRASGDPSTSLATNSNHAAPFPSGPYS
HDTGRDLLNDNLLNNPALQQQHPGNPLYNTGSYPHQPPAHSASPPPSQVKYLLQEAQWSH
SGPASVSPPQQNHLLGNQGHGLPYGLPIMAHPSRQEQVHLMQLHHQHHQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQSQGPDQESYHPLSPRTSAATA
LHNIDEYEPRGPGRPLYQRRISSTYPDEPSPANTHNALSQQSQPCTSDPQDHTHPHIQHH
QHQHAHYVYPSHDPWPSNGGGPGPFQNIPCNGAGTLAQHREILASKALRQTEEQVKAEAT
AAQQTHPHSLNSLQHLGQFPPLMPNNKQQPPPPQAPTEPSQGAPNLNKPPTMSYASALRA
PPKPRAVRPEQVKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggagaagtcatgtgaagaagccagcagatcgttagtcaggcgg
gagtacgaggcggcagtcagccacagcacggacgccctggtggtccttgccccatcctcc
ggtgcccctgtcccgccgagccctccatcccttgttgccaccggaccccttcgcagccgt
gccctgctctaccgaattgctgccttcctgcagctgaaaaactatgatgaagcagatgaa
gactgcaaacatgtcctggtagaagagattgccaggggagacggttcgatacaggccagc
ttgcgctccatgctgttggatggcagcctgcaggaggtggccagcatcctctcaaaagcc
ttgtatggggagccaatgaatggcattgttgcaaaagacctgaccagattaaaaatgcta
ctctcagaaatagaggctataaataggggcatggcaccagaatacacggatgaccaggag
gaagaggttcaagatggctggcagttccggcctcctccccgaggagtcaccagcagtgag
gagtacaccctctgtaaaaggtacttggagcagggtctgtgtcggtacggggcccagtgt
acatcagcccactcgcaggaggagctgatggagtggcagaaacgctatgcgtcacgcctc
atccgcctcaaacagcagcaggaaagcaaacacttcaccgaaaactacatggagaccctg
atagagaagtggatgaactccctctccccagagaaagtgctaagtgacagtttagaagga
gtgaatgtagaaaccagctccagcctctctgttaccgtcaccaccaaaaaatcttcccac
tcctggaccttctccttgttgtgcaagccggctagaaagctgtaccgcatcgccctgctc
tatgatgcccaccgaccacatttcttcatcacaggtgtgtcagcgggggaccggctccaa
gccgtccagaaaggctgccaagagtggactccaggagaggaaacagcattggcaacagac
aatggcctggacaactgtttctacaaggtggcagtgagcttcagcacggagatctttggt
accttccgacagactgttgtttttgacttcggctcagaacctgtgctgatgcagcggatc
atggtggatgctgcctctattgaagacctagaacatttgatggcagccaggcagcagctc
ttgatgactgcaaagcgctgggactcttcctgtaagaccattgtagaattcagtcctaat
gagacgatggctgaactggagcgcagcctcctttcccgatatcagattcctctatcggcc
gaccagctcttcacccagtcagtcctggacaagactctgaccaaagacaactaccaggcc
cgactgcatgacctgctctacatagaggagattgcacaatataaggaagttagcaagttt
aacatcaaagtgaacctccagcttgttaccagctttatgctgaccggcatttctgttgga
gccaagtatgcccagaatggacagctctttgcacgcttcagactcactgaaacactttct
gaggacacactggctggacggctagtgatgaccaaggtaaattcagtccttctgctgccc
ttgggccgtgaaggagtcagctgccagccacctcctggggtcaaagagcgcgtttatgag
gctgtgatcgaggagaagaccaaggaatacatcttcctaaggatctgcaaggactgctgt
gaggagctggggctacagcctgacagagaaatacaggtggagctccagttccagctgaac
agactgccactctgtgagatgcactatgccctggatcgcatcaaagataacaccatcctt
ttccctgacattagccttgtccccaccattccctggagccccaacaggcagtgggacgag
cagctggacccccgtctgaatgccaagcagaaagaggccatcctggccatcaccacaccc
atcgctatccctctgcccccagtcctcatcattgggccctatggcaccggaaagaccttc
accctagcacaggctgtcaaacacatcctccgccaggaccacagcagggtcttgatctgc
acccactccaacagtgcggctgacctttacattaaggactaccttcatccttacgttgaa
gcaggcaatccgcatgccagacctctcagggtatacttcaggaaccgctgggtgaagacg
gtccacccagtggtccagcagtactgtctcatttccggcacacaggtcactttccagatg
ccgacaagggaggacatcctcaggcaccgtgtggtggtggtcaccctcagcacctcccaa
tacctctgccagcttgacttggagccggggttgtttactcatatcctactggatgaagca
gcccaggccatggagtgtgaaaccatcatgccttttgctcttgctagcaagaccacccgc
atcgtgctggctggggaccacatgcagctcagtccatttgtgtacagtgagtttgcacgg
gaacgtaacctgcacgtgtcactgctggaccgactgtatgagcactacccacgggaattc
ccctgtcgcatcctcctgtgtgagaactaccgctcccatgaagctatcatcaactacaca
tcagagttattttatgatgggaagttaatggcaagtgggaagcagccctcccataaggac
ttctaccctctgaccttcttcacagccagaggagaagatgtccaggagaagaacagtact
gcctactacaacaacgctgaggtatttgagatcgtggagcgggtggaggagctacgcaag
aagtggccagtggcctgggggaagttggacgagggcagcattggagtggtatcaccatat
gctgaccaggtgttccgcattcgtgctgagcttcgaaaaaagagaatgcatgaggtcagc
gtggaaagagtgctcaatgttcaaggtaaacagttccgggtgctgttcctaagcactgtg
cggacgcggcatacctgcaagcataagcagacagccatcaagcgtaaagaacaactagtt
gaggactcaacggaggaccttgactatggctttctctccaattacaagctactcaacaca
gccatcaccagagcccaatcgctggttgcggtcgtgggagaccccatagcactatgctcc
gttgggcgctgcagaaaattctgggagcattttatctctatctgccatgaaaactcaagc
ctacatggcatcacctttgagcagatcaaggctcagctggaggccctggagctcaagaag
acctatgtcctcaacccactggccccagagttcatcccacgtgccctcagacccctgcaa
gggcaccactcttcttcgcaggccctccatccccaccatcatccgcatcctcagcacgca
cagcccacctccaacaaacaggttccgcagcaacagcagcaacagcagcaacagcagcag
cagcaacagcagcaacagcaactgcagcagcagcaacaacagcagcagcagcagtccccc
cctaaggggaaacatgcaaaccacacagagcacctgccacctgaaggatatgtgcaacct
aacccagccgtgctgatgggaaaccctattcgggcattcacaccacccttgggtggcaca
ccggctggcatgggcaagtcccccagtcctgtgcagagaatagatcctcatacaggcacc
agtatcctctacgttccagccgtgtatggtggaaacatggtcatgtccatgcctctgcct
ttgccatggccaggttaccagaatcgctttgctgtggaccctcgcatcatgagccaccct
gcagccatggcctacaactttaatctgttgcaggcccagaatcgaggctcccccatccct
tacagtggggtggcccacccctctcctctaggcatgggccagcctagccctgacaaggag
ctacaggcagaccccatcagaaatggtaaattggaaggttgtccaaagtcagaacagagc
cgtcttcagacaccagagaggaaaaccgctgacatgaaggaaaaacagggagatttagac
acaggccaaagtcgaagtctagacccacagacagacgggctagttggatttcccaacgca
ctgctccatcgaaaagacccctcagctgcccagagacccctcagctaccacctggcacca
cccagtcaagcttttcctccacatcctgccagcggaagacccttcccccctcagtatcca
gtctccaggcttccatatcgggtcagccagcctcagcacccagggttggcccaacagagt
caacagcagcagcaacagctcagtcctgcctacactagtggcagccacaacgcttccttc
ttcagtggccccatacccgctcatagggctgtccagtctcccactttggacgggctggat
tctggaggggtggaggagatgagtagctccattaggactccaatgggccacccaggaggc
caccacccaggcctgtcacagcataacagggtcaatagctttggggaggatggacaggat
ggaagcctgggagatggtctagacctccagggtcccttggctctagaggccctaagccag
cagcaacagcagcagcaggcagccaggctgggccagtggggagaggcagcgggccctttc
ctccagggtggtgttgccttccctttgccccaacagctcacccaccttgctcagcccggt
atggctcgcatcccccatcaactgctccgggcagctagttggggccttagtgccaatatg
gaggatgaagctgtttcttctgcctccactggaccaccatacaccaggtacccgggcctc
ttgagagagatgcccccacaggaacaggccgaacccagggaagcagctgagatgcagccc
ccacctcagtctcgtctcctccagtaccggcagacccagtcccgtgcctcaggtgaccct
tcaacctctttagccaccaactccaatcatgctgcccctttcccatcaggaccttattcc
cacgacaccggtcgtgacctccttaacgacaaccttctcaacaacccagcgctgcagcag
cagcaccccgggaaccccctatacaatactggtagctacccacaccagccaccggctcac
tctgccagcccccctccctcccaggtcaaataccttctgcaagaggcacagtggtcccac
agtggacctgcatcagtgagcccaccacagcagaaccacctgttagggaaccagggccat
ggccttccttatggactgcccatcatggctcatcccagcaggcaagagcaagtccacctg
atgcaacttcaccatcagcaccaccagcagcagcagcagcagcaacaacaacagcagcag
cagcaacaacagcagcagcagcaacaacaacaacaacaacaacagcagcaacagcagcag
cagcagcaacaacaacaacaacaacagcaacaacagcaacaacaacaacaccaacaaagt
caaggtccagaccaggagtcctaccacccactgtcccccagaacatcagcagccacagcc
cttcacaatatagatgagtatgaaccaaggggtccaggtcggcctctctatcagcgtcgc
atctcctccacctacccagatgaaccgtctccagccaacacccacaatgccctttcccaa
cagtcccagccctgtacgtcagacccccaggaccacacccatccgcacatacagcatcat
caacaccaacacgcccactacgtttatccctcacatgacccctggcccagtaatggtggg
ggtcccggtccgttccagaacattccatgtaacggagccggcacactcgctcagcaccgg
gaaattctggcttccaaggcccttcgtcagacagaggagcaggtgaaggctgaggccaca
gcagcacagcagacgcacccacactccctcaactcccttcagcaccttggacagtttcct
cctctcatgcccaataacaagcagcagccgccaccgccgcaggctcccacagagcccagc
caaggggctccaaatttaaacaaaccccccaccatgtcctatgccagcgccctccgcgct
ccacccaaaccccgagctgttcgcccagaacaggtcaaaaagaacagcgaccctctctcc
ctccttcaagagctgagtataggaagttcaaatggtagcaatgggtactattcctacttt
aaatga
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integrated database retrieval system
