Xiphias gladius (swordfish): 120800077
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Entry
120800077 CDS
T07311
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120800077 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
HERV-K_REC
Motif
Other DBs
NCBI-GeneID:
120800077
NCBI-ProteinID:
XP_040001815
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Position
LG15
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALAGLVKDGGKEAKTKGKDAKEGKKDTSST
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPASIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITSVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLSKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggaggccaaggctctggccggcttggtcaaagatggtggc
aaggaagcgaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagcacc
acaccgggtgttgccttctctgttgacaatacgataaaacggccaaacccggcaccaggt
acacgcaagaagtccagtaatgccgaggtgatcaaagaacttaacaagtgccgggaggag
aactcaatgagactggacctatctaaacgttccattcacatgctgcccgcctctattaag
gagttgacgcagctggctgaactctacttatacagcaacaagttgcagagcctgccagct
gaggtgggttgcctatcaggcctggtcactttggccctgagcgagaactctctgaccagt
ttgcccgactccctggactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagataccggctgtcgtgtaccgactgacatctctgaccacgctgtacctgcgc
ttcaaccgtatcacatcagtagagaaggacatccgaaacctatccaagctcactatgctc
agcatccgcgaaaacaagattaaacagctgcccgcagagataggggagctgtgcaacctt
attaccctggatgttgcccataaccagttggaacacctaccgaaggagattgggaattgc
acacagataaccaacctcgacttgcagcacaatgagctcttggacctcccagagactata
ggcaatctcgccagcataaatcgcttaggtctgagatataatagattgtcagccatcccc
agatcattatccaaatgtcgagaactagaggagctaaaccttgaaaacaacaacatttca
gtgttgccagagggcctgctttcaagtttggtcaacctgacaagtctaacactggcgagg
aactgcttccagtcgtaccctgtgggtggaccatcccagttctccaccatctactccctc
aacatggagcataaccgtatcaacaagattccctttggtatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacgtctctgccgttggactttggcaca
tggactagcatggtcgagctcaacctggccactaatcagctgacaaagatcccagaggac
gtctgtggtctagtctctctggaggtgttaatattgtccaataatcttctcaagaagtta
ccacatggtattgggaatttgagaaagctacgagagctcgacttggaggaaaacaagttg
gaatctctacctaatgaaattgcttatcttaaagatttacagaaattggtgttgacaaat
aatcagctaactacgttacccagaggcatcggtcacctcaccaacctgactcatctgggt
ttgggggagaacctgctgcaacaccttcctgaggagattggtacactggagaacctggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccaccccagatt
gtcgcaggaggcccctccttcatcatccagttcctcaagatgcagggaccataccgtgcc
atggtctga
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