Xiphias gladius (swordfish): 120800154
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Entry
120800154 CDS
T07311
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04110
Cell cycle
xgl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120800154 (smc3)
04114 Oocyte meiosis
120800154 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120800154 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120800154 (smc3)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120800154 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
120800154 (smc3)
Proteoglycans [BR:
xgl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120800154 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
MFD_D3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
120800154
NCBI-ProteinID:
XP_040001957
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All DBs
Position
LG15:complement(22760739..22790102)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSTKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLSRSEDLDALIDKTEAEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttatagggaccaaactgtagta
gacccgtttagtccaaagcacaatgtcatcgttggaaggaatgggtcaggaaaaagtaac
tttttctatgccattcagtttgtgctcagtgatgagttcagccacctgcgacctgaacag
cgcctggccctgctccatgagggaactggtcctcgtgtcatttcggcttttgtggagatc
atatttgacaactctgacaaccggctgccgattgacaaagaggaagtctcccttcgtcgt
gtcattggtgcaaagaaggaccagtacttcttagacaagaagatggtgactaagaatgat
gtcatgaaccttctggagagtgctggcttctcccgtagtaacccctactacatcgtcaag
cagggaaagatcaatcaaatggccacagcacctgactcgcagcgtctaaagctgctacga
gaggtggcagggacacgggtgtatgatgagcgcaaggaggagagtatttctcttatgaag
gaaacagaggggaagcgagagaagatcaatgagctgctgaagtacattgaggagcgtctg
cacaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agagccttggagtacacaatctacaaccaggagctgaacgaaacccgtgccaaactagac
gaattgtccaccaagagagagacctgtggagacaaatccagacagctgcgtgatgctcag
caagatgccagagacaaagtagaggagacggagcgtgttgtgcgggagctgaagtccaag
atctctgccatgaaggaggagagagagcaactgtcggctgagcgccaggagcagatcaag
cagaggaccaagcttgagctgaaggccaaggacctgcaggacgagctggcaggcaacagc
gaacagaggaaacgcctgctgaaggagcgtcagaagctgctggagaaaatcgaggagaag
caaaaagagctgcaggagactgagcccaaattcaacatggtgaaggaaaaagaggagcgg
ggtatctccagattggcccaggctactcaggagaggacagacctgtatgccaagcagggc
cgtggcagccagttcacctccaaggaggagagggacaagtggattaagaaggagctgaag
tctctagaccaggccatcaatgataaaaagaggcagatcgcagccatccacaaagacctg
gaagacacagagacgaataaggagaagaacctggagcagtacaataaactcgatcaagat
ctaaatgaggtcaagactcgtgttgaggagctggacaaaaagtattacgaagtgaagaac
cggaaagatgagctgcagagcgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccctggcagccaaacgagaggacctggagaagaaacagcagctccttcgagcggcc
accggcaaggccattctgaatggcattgacagcatcaacaaagtccttgagcattttcgt
cggaaaggcattaaccagcacgtcatcaatggttatcacggcatcgtcatgaataacttt
gaatgtgagcctgctttttatacctgtgtggaggtgactgcgggtaccagactgttctac
cacattgtggaaacagatgaagtcagcaccaaaatactgatggagttcaacaaaatgaac
ctgcccggagaagtcacattcctgcccttgagcaaactggacgtcagggacactgcctat
ccagagaccaatgacgccatcccaatgatcagcaaactgcgctacagccccaactttgac
aaggccttcaagcatgtgtttgggaagaccctgatttgtcgcagcatggaggtttccacc
cagctggccagagctttcactatggactgtataactctggaaggtgaccaggtgagccac
cgtggagcactgacaggagggtactacgacactagaaagtctcgtctggagctgcaaaaa
gacatgaggaaggctgaggaggagttgggtgagctggaagccaagctcaatgagaacctg
cgcagaaacattgaacgcatcaacaatgagattgaccaactgatgaaccagatgcagcag
attgaaacacaacagaggaagtttaaggcatccagagacagtattctgtcagagatgaag
atgcttaaggagaaaaggcagcagtcagagaagacgttcatgcccaagcaacgcagtctc
caaagtttggaggccagtctccatgccatggagtccaccagggagtcacttaaggccgag
ctgggtacagatctactttctcaactcagcctggaggaccagaggcgcgtcgatgacctc
aatgatgagatccgtcagctccagcaggacaacaggcagttgttgaatgagaggatcaag
ctggagggcatcatgaccagagtggaaacctatctcaacgagaacttacggaagcgtctt
gaccaagtggagcaggagctaaatgagctgcgagagactgagggaggcacagtgctcaca
gccacaacatctgagctggatggcatcaacaaacgtgtcaaagacactttgtcccgatca
gaagatctggatgctcttattgacaagacagaggcagagatcaaggaccacataaagagc
atggagcgctggaagaacattgaaaaggagcagaatgacgccatcaaccacgacaccaag
gagctggagaaaatgaccaacaggcaaggcatgctgctcaagaagaaagaggagtgcatg
aaaaagatcagagagctcggctcactgcctcaagaggcctttgagaagtaccagaccctc
acactcaaacagttgttccgaaaactggagcagtgcaacacagaactgaagaagtacagt
catgtcaacaagaaagctctggaccagtttgtcaacttttctgagcagaaggaaaaacta
attaagcgtcaggatgagttggaccgtggctacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaaatatgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaggtcttccagaagttggtgccgggtggcaaagctacactggtgatgaagaagggt
gatgctgaaggcagccagtctcaggatgagggtgagggcggtgcagacagtgagaggggc
tctggctcacagagcagcgttccttcagtggaccagttcactggagttggcatcagggtt
tcgttcacagggaagcagggggagatgagagagatgcagcagctgtctggaggtcagaaa
tccctggtggctctggctctgatatttgccatccaaaagtgtgaccccgcccctttctat
ctgtttgatgagatcgaccaggccctcgacgcccagcacagaaaggctgtctcagacatg
attgtcgagctggcaggccatgcccagttcatcaccaccactttcaggcctgagctgctc
gagtctgccgacaagttctacggtgtgaaattcagaaacaaagttagtcacattgatgtg
atcacagcggagcaggccaaagactttgtggaggatgacaccacccacggttaa
DBGET
integrated database retrieval system
