KEGG   Xiphias gladius (swordfish): 120800216
Entry
120800216         CDS       T07311                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120800216 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120800216 (aptx)
Enzymes [BR:xgl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     120800216 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     120800216 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     120800216 (aptx)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120800216 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     120800216 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_6 FHA zf-C2H2_4 2B_soluble
Other DBs
NCBI-GeneID: 120800216
NCBI-ProteinID: XP_040002076
LinkDB
Position
LG15:14962585..14966574
AA seq 333 aa
MPICWLISEEGNHKPIQLSHLQTVVLGRGPETTIKDKKCSRHQVELKAECNKGYVKVKQL
GVNPTSIDSVVVGTGNEIKMKPGQQLHIVNQLYPYTVQFKEDPTGNHGGTKRPRESAPDD
RESQRESQKMKATKQTEKLSVSVSHGEATKTSENVGHWSQGLKISMQDPKMQVYKDDKIV
VIKDKYPKARYHWLVLPWQSIPSLKALREEHCDLVKHMQQVADRMVQQCPDASSLRFRTG
YHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESHDVIQMLETNGRVTVKEGA
SEMLKLPLRCHVCHKELPTIPALKEHLKSHFPR
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccaatttgttggctcatcagcgaggagggcaatcataaacccattcagctgtcccac
ttacagacagttgtcctgggtcgaggtccagaaacgactattaaagacaaaaaatgctcc
cggcaccaagttgaattgaaagcagaatgcaacaaaggttatgtcaaagttaaacagctg
ggcgtgaaccccacctccatagactctgtggtggtgggtacaggcaatgagatcaaaatg
aagcctggacagcagcttcatattgtcaatcagctctatccatacactgtacagttcaaa
gaggatcccaccggcaaccacggtggcaccaaaagaccacgagagtcagctccagatgac
agagagagtcagagagagtctcagaaaatgaaagccaccaaacagacagaaaagctctct
gtgtcagtcagccatggagaagccacaaaaaccagtgaaaatgttggacattggagccaa
ggtctgaagatttcaatgcaagacccaaagatgcaggtatacaaggatgataagatagtg
gtaattaaagataaatacccaaaagctcgctaccactggctggtcctcccgtggcagtcc
atccccagtctgaaggcgttgcgtgaggagcactgtgacctggtgaaacacatgcagcaa
gttgctgaccggatggttcagcagtgccccgatgctagctcactacgcttccgcacaggg
taccatgccatcccaagtatgagtcatgttcatctccatgtgatcagccaggactttgat
tctccttgtttaaagaacaagaagcactggaactcattcacaacagactatttcattgag
tctcatgatgtcattcagatgcttgaaacaaacgggagggtcactgtgaaagaaggcgcc
agtgagatgttgaaactacctctgcgctgtcacgtgtgtcacaaagagcttcccactata
ccggctctgaaggaacacctgaagtctcactttcccagataa

DBGET integrated database retrieval system