Xiphias gladius (swordfish): 120800455
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Entry
120800455 CDS
T07311
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04141
Protein processing in endoplasmic reticulum
xgl04210
Apoptosis
xgl04217
Necroptosis
xgl04218
Cellular senescence
xgl04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120800455 (capn2b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120800455 (capn2b)
04217 Necroptosis
120800455 (capn2b)
04218 Cellular senescence
120800455 (capn2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120800455 (capn2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120800455 (capn2b)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
120800455 (capn2b)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C2: calpain family
120800455 (capn2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
120800455
NCBI-ProteinID:
XP_040002509
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All DBs
Position
LG15:2158144..2181776
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AA seq
697 aa
AA seq
DB search
MSGVASTLAKKRAMAAGFGTNANAVRYLNQDFASLRAQCRSAGQLFCDPTFPAAPESLGF
KELGRSSYKVRGVTWKRPTELVSNPEFIVGGATRTDICQGALGDCWLLAAIASLTLNEYV
MARVVPTDQGFGDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGREFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGISENYDLQRPPSNLFHIIKKALEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVNYRGRQEKLVRMRNPWGQVEWTGAWSDG
SSEWNYVQGDCPHANAEDGEFWMSFNEFLRHYSRIEVCTLTPDTIEDDSVKHWSVSKFDG
TWRRGSTAGGCRNHPYTFWMNPQFVIKLEEEDDDPDDGEVGCSFVVGLIQKNRRKLRKQG
EDMHTIGFAIYEVPKQFHGQREVHLDKNYFLTHAQTARSETFVNLREVSSRFKLPPGEYL
IVPSTFEPHLNGDFCIRVFSEKQTETLPCDDPVNAELDDETVSDEEVDAGFRGLFTKLAG
DDMEISAAELQTIMNKIVAKRTDIKTDGFSMETCRVMVNLMDDSGNGKLGLGEFATLWKK
VQRYLSIYKKNDSDNSGTMSTPEMRVAFKDAGFTLNNTIYQLLVARYSDPDMTIDFDNFV
GCLMRLEMMFKIFKNLDPHNSGSIELDFNQWLNFAMI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgtggcgtccactctggccaagaagcgggccatggccgcgggtttcggcacc
aacgccaacgcggtgcggtacctgaaccaggacttcgcgtctctgcgggcgcagtgccgc
tccgccggacagctcttctgcgacccgaccttccccgccgcgcccgagtccttgggcttc
aaggagctgggccggagctcctataaggtccggggagtcacctggaagaggcccacggaa
ctggtctctaaccctgagttcatcgtgggcggagccaccaggacagacatctgccaggga
gctctgggtgactgctggctgttggctgccattgcttcactgaccctgaatgaatatgtg
atggccagagtcgttcccactgaccagggctttggtgacgactacgctggcatcttccac
ttccagttctggcagttcggggagtgggtggacgtggtgatcgacgaccgtctccctgtc
aaagatggagagctgatgttcgtccactcggcagaggggagggagttctggagcgctctg
ctggagaaggcctacgccaaagtgaacggctgctatgaggcattgtctggcggttcgacc
acagagggctttgaggatttcaccggaggcatttctgagaactacgaccttcaacgacct
ccgtccaacctgttccacatcattaagaaggccctggaggctggagcgctgctgggctgc
tccatcgacatcactagcgccgcagactcggaggctgtaactcgtcagaagcttgtgaaa
ggccacgcctactcgctgactggcgccgtggaggtgaactaccggggtcggcaagagaag
ctggtgaggatgagaaacccctggggtcaggtggagtggactggagcctggagtgacgga
tcatctgagtggaactacgtgcagggagactgtccacatgccaacgctgaggacggagag
ttctggatgtctttcaatgagttcttgcgtcactactcccgtatcgaggtttgcactctg
acccccgacaccattgaagacgactcagttaaacactggagcgtcagcaagtttgacggc
acctggagaagaggatccaccgctggaggctgcaggaaccacccctacacattctggatg
aatccacagtttgtgatcaagctggaggaggaggacgatgacccagatgatggtgaggtg
ggctgcagcttcgtggtcggtctgatccagaagaaccgcaggaaactgcggaaacaagga
gaggacatgcacaccatcgggttcgccatctatgaggttccgaaacagttccacgggcag
cgggaggtgcatctggataagaactactttctgacccacgctcagacagcgaggtcagaa
accttcgtcaatctgcgcgaggtcagctctcgcttcaaactgccacctggagagtacctg
atcgtcccctccacctttgaaccacacctcaatggagacttctgcatccgggtgttctcc
gagaagcagacagagaccctaccctgtgacgatccagtcaacgctgaactcgatgatgag
acggtgtctgatgaggaggtggacgcaggattcagaggtctcttcactaaactcgccgga
gacgacatggagatctctgcggcggagctgcagaccatcatgaacaagatcgtcgccaaa
cgaactgacatcaaaactgacggcttcagtatggagacctgcagggtcatggttaacctg
atggacgacagcgggaacgggaagcttggcctcggagagttcgccacactgtggaagaag
gttcagagatatctgtccatctataagaagaacgactccgataactcggggacgatgagc
actccagagatgagagtggccttcaaagatgcaggtttcactctcaacaacaccatctac
cagctgctggtggctcgatactccgacccggacatgaccatcgacttcgacaacttcgtg
ggctgtctgatgaggctggagatgatgttcaagatctttaagaatctcgatcctcacaac
agcggctccattgagctcgacttcaaccagtggttaaacttcgccatgatctga
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