Xiphias gladius (swordfish): 120800460
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Entry
120800460 CDS
T07311
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
120800460 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
120800460
NCBI-ProteinID:
XP_040002517
LinkDB
All DBs
Position
LG15:12402807..12433578
Genome browser
AA seq
3142 aa
AA seq
DB search
MAGCLQSCQLCQKWAFLICLLVMFSLSFCFASVDAEPFDPAHLYHHRSGPNEDNIIIANN
GIRVPFGRSVYLDPVKDLVTEVQPGDRCHITVLDNDPLAQKPGMLTPKKFPCSFGVDEVK
YTHFGSRSPSKDRVKLQLRYDSQTDTAIIPFMLEVEVVFQQLEILTRNMPLNVEKLNGDS
NPIDKKGLEFSFEDGVTQCKITTLVGAGGLPRYGTLLNNPTNGQMVDCDEFVKQGIRYKH
NAKTNSPNRDYIPMMVELKDNEGNTIMQEHFQMMVRIREGAENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDPDDLIFNITSQLSPQQGYIISTDDQNLPITSFYQRDIRDLK
IAYKPPSEDSDVERIFQLEFEIVDTDGAVSDTFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSSQNLEISDEDNLEDVRITVVDGLKHGDLTVLGTSRKFFTPADLDAGIVVYQHD
GSDTYSDNIIFRMTDGSNEVEFLFPITIAPTDDEPPIINANTGLVLFKNEVMQISPFILS
ATDIDSEDSTIKFILEAPYSTVGELLLRQVEPPSDPSLWKFSETDEMFEQVVTEWFQQDI
LDGKLFYRHIGPHSTTTVIDQFVFRVQDDNDPPNQSGEHMFTIKIHPIDDLAPELFPGTS
LHMTVQEYELTHFKKKFLCYSDLDSDDRDLKYTITKPPTDTDENNPAPLGEIVLTDRPDT
VITEFTQAQVNHHKVSYKPPDQELGITPKVAQFTFIVEDTAGNTADGLFTIFLQPVDNKP
PVITNTGFTVMERSTYIITRNELHATDTDTDDENIVFTVTQIPRYGQLQYLGIDMSNGKT
FVLEDIANGRLTYIHGGEESLSDVIKLDVSDGFHEIPITIKITIEPVDDETPTIMLPAGL
LGASIDVLENGATEITSNVIQGHDEDTDDLMLTFIVEEPPKLGEILVNGAPAERFTQEDI
INGVVVYAHTSGEIGPVKEHDSFNLTLSDMSDQWVVGGNKVQGVTVHITILPVDSIPPIV
SVGEQFVVVEGEKNAITLEHIQAEDIDTDNDDILCTIIVQPTSGYVENISPAAGSEKSRA
GTAITAFSIKDVALGHIYYVQSIHKGVEPVEDRYTFRCSDGINFSERHFFPIVIIPANDE
KPEIFIREFVVMEGMSLVIDTPILNAADADIPGDELHFEIIKKPKHGTIVQQLSTGTIPV
DKFNLEQIKEASNIVYEHDDSETKEDSFEIRLSDGIHKVEKTVLIMVIPVDDETPRMAIN
DGLDVEIGETKVISNRVLKATDLDSEDKDLTYVVRYGPGQGYLQRINKFGDVLGNITLGM
NFTQDEIDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTTDINSPDEYLSFSITRAPSRGHLESTDHPGVPISTFTQLQLA
GNKIYYIHTSDDEMKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTISRLVVEEGET
KLITPFELTAEDRDTPDNLLRFIVTQVPVHGQLLFNNTQPITTFTKQDLNENLISYNHDG
TETNEDSFSFTLTDGTHTDFYVFPDTVYETHKPQMMTIHINTVDNGVPQIVVNKAAASLK
VLQSGHLGFVITSKTLRSEDRDSPHRVLKYSVSEAPLHGFIMNTALGNDSIKTFTQADIN
DMKICYVLLDGSNATSDIFYFSVEDNGGNKLKPQPFRLNWAWISLEREYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVKIFTDQEFE
NSETFEIQLSDPVMGVLEFPDIATVEIVDPGDESTVFIPQAEFRIEEDIGELLVPVRRSG
DASQELMVVCYTQQATATGTIPSTVLSYSDYITRPEDHTSVLRFDKDEREKPCRIIIIDD
SLYEEEESFNVSLSMPMGGQVGANFPTAKVTILADSDDEPSLYFGEPEYVVEESSGYVEV
KVWRTGTDLSKTATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPELEGPETFDLVLRMPMNAVLGEPSKTTITINDTVTDVPKLQFKEGSYKVDESDGEVKA
IVYRSGDVSLGSTVRCYTRQGSAQVMMDYSERPNTDASIITFQPGETEKPCVVSLMDNSV
HEEDEEFRLVLGTPKSKSPYGASIGEQKEALVTITDEKDKPIIRFSEIKYSVREPQVKGE
VAIVKIPILRIGDTSKVSVVRVHTKDGSATSGDDYNPLSEDVEFKEGEREHFVEIEILYD
GQREMREAFTVHMKPDDNMVAEIQMNKAIVYIEEVDSVADVTFPAVPQVVSLLMYDDTVK
TKDKPHPPNGYPVVCVTACNPKYHDFDKTGSICSAENINDTLTQYRWLVSAPTGSDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRVQCAARAFNANGDAGLELSSPIVVISKEEGM
CQPRIPGTVGAEPFSAKIRYTGPDDPDFPNLIKLTVNMPHMDGMLPVISTRPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSAIIRSANSLRFYR
NLNLEACLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSYVTVRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMFPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGTSMSSMVMCADHLGLTFSLALVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLIPCIASPNGEFSIPPVCHPREPITFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
RELWLSDGSMGFGEGTDAAFSEGSMIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNKEYGCLADAPSLLYRFKILDKAQPETQASAFGDVAFKATLAQDTTGALPLVKQP
GSDGFTLSSSPLFQVAAGREWFIHTIYTVRSRENANRNIGKRSVEYLHHSVSSVEQPQGS
DRATRHRRAAPAFSGPALAQDIGVENNRGTNIQHIGLDRTDRMVVSQHQPWSPNRDPLLD
RPLLESSGREAADTSTLPMLVGLAGLILLICLIATIVILLLRRKKREKKTQFPPYTTSSS
SAYSGYSQGPVGMLGSSDSSEV
NT seq
9429 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagttgccaactttgtcaaaagtgggcatttttgatatgcctc
ctggtgatgttttctcttagcttctgttttgcctcagtagatgcagagccatttgaccca
gctcatctctatcaccacagatctggacctaatgaagacaacatcatcattgctaacaat
gggatcagggtgccttttgggaggtctgtgtatctggaccctgtgaaggacctggttaca
gaagtgcagcctggtgatcgctgccacatcacagttttggacaatgaccctctggcccag
aaacctgggatgctgacccctaaaaagttcccctgttcatttggagtggatgaagtgaaa
tacactcattttggatctcggagccccagcaaggatcgtgtgaagctgcagcttcgttat
gactcccaaacggacacggctatcatccctttcatgctggaagtggaggtggttttccag
caacttgagatcctcaccaggaatatgcctcttaacgtagaaaagctcaatggtgacagc
aaccctattgacaaaaagggtctagagttttcctttgaggatggtgtcacacagtgtaag
atcaccaccctggtcggcgctggaggtcttcccaggtatggcactcttttgaataacccc
accaatggccaaatggttgactgtgatgagtttgtgaaacagggcattcgctacaagcac
aatgccaaaacaaattcaccaaacagagactatattccaatgatggtggagctgaaggat
aatgaaggcaacactataatgcaagagcatttccaaatgatggttagaatcagagagggt
gcagaaaatactgctcctaaacccagctttgtagccatgatgatgatggaggttgatcag
tttgtgatgacagctattacaagcgacatgctggctgctgaagatgttgaatctgaccca
gatgatttaatcttcaacattacttcacaactgagccctcagcagggttatatcatcagc
acagatgatcagaacctgcctatcacctccttctatcagagagacatcagagatcttaaa
atagcctataaaccaccctcagaggactcagacgtagagaggattttccagctagagttt
gaaattgtagacaccgatggggctgtttctgatacatttgcttttatgattgtggtgaag
cctatgaataccttggctcctgtagcaaccaaaaatacagggcagctattgtttgaaggg
cagtcccgagcgctctccagctcccagaatttagagattagtgatgaggataacctagaa
gatgtgagaattactgttgttgatggcttaaagcacggagaccttactgtgcttggcact
agtagaaaattctttacacctgccgatttagatgccggcattgtggtgtaccagcatgat
ggcagcgatacctatagcgacaacattatttttagaatgactgatggcagtaatgaagtg
gagtttttgttccctattactattgctcccactgatgatgaaccccctattatcaatgct
aacactggtctggtgctcttcaaaaatgaagtcatgcagatctctcctttcatcctgagt
gcaacagatattgattcagaagactccaccataaagtttatcttagaggcaccgtactcc
actgttggagaattgctgctaaggcaagttgagcctccatctgacccatctctctggaag
ttcagtgagacagatgagatgtttgagcaggtagtgactgagtggtttcagcaggatatt
ctggatggaaagctgttctatcgtcacatcggaccccatagcaccaccactgtgattgat
cagtttgtgttcagggtccaggatgataatgaccctcctaatcaatcaggcgagcacatg
ttcaccatcaaaatacaccctattgatgaccttgctccagagcttttcccaggcaccagc
cttcacatgacagtccaggagtatgaactgacacacttcaagaagaaattcttgtgttat
agtgatttagattcagacgacagggacctcaagtataccatcactaagccaccaactgac
acagatgaaaacaatccagcccccttaggtgaaattgtactgactgacagacctgacact
gtaattacagagttcacacaggcccaagttaatcaccacaaagtatcttacaagcctcca
gaccaggagctgggcatcactccaaaagtggctcagttcacattcattgtggaagacaca
gctggtaacacagcagatggactattcaccattttcctacagccagtcgacaacaaaccc
ccagttatcaccaacacagggttcactgtaatggaaagaagtacatatatcattactagg
aacgaactgcatgccactgacacagatacagatgatgaaaacatcgtctttactgtgacc
cagattcctcggtatgggcagctgcagtatttggggattgacatgtcaaatggcaaaacg
tttgtgcttgaagacatcgcaaatggccgcctaacttacatccatgggggagaagaatcc
ctcagtgatgttatcaagcttgatgtcagtgatggtttccatgagattcccatcaccatt
aagatcaccatcgagcccgttgatgatgagacccccacaattatgctcccagccggccta
cttggagcctccatcgatgtactggagaatggagcaacagagattacaagcaacgtcatt
cagggccatgatgaagacacagatgacctaatgctcacttttattgtagaagaacccccc
aagctgggtgaaatcctggttaatggtgcccctgctgagagattcacccaggaggacatc
attaatggggtggtggtgtatgctcacacatccggtgaaattggaccagtcaaagaacat
gactccttcaaccttactctgtctgatatgtcagatcagtgggttgttggtggaaataag
gttcaaggtgtgacagttcacatcaccatacttcctgttgacagcattccacctattgtc
agcgtcggggagcagtttgttgttgtggaaggggagaaaaatgccattactctggaacac
atccaagctgaagatattgacacagacaatgacgatatcctctgcaccatcatcgtccaa
ccaacatctggttatgtggaaaacatctccccagctgcaggctctgagaaatctagggca
gggacagccatcactgcctttagtattaaagatgttgcccttggtcatatctactacgtc
caaagcatccacaaaggtgttgaacctgtggaagatcgttacaccttccgctgttcagat
ggtattaacttctctgaacggcacttcttccctatagtcatcattccagccaatgatgag
aagcctgaaatttttattcgtgagtttgtcgtaatggagggcatgagtctggttattgat
acaccaattctgaatgcggctgatgctgacatccctggggatgagctgcactttgagatc
atcaaaaaacccaagcatggtacaatagtacagcagctcagcactggcaccatccctgtg
gataaattcaacttggaacaaatcaaagaggcatccaacattgtctatgaacacgatgac
tctgagaccaaagaagacagctttgaaatcagactctcagatgggatacataaagtggaa
aaaacagttcttatcatggttattcctgttgatgatgaaacgccaaggatggctataaac
gatggccttgatgtggagattggagagacaaaagtaattagcaacagggttttaaaggct
acagatcttgactctgaagacaaagacttaacatatgttgtgcgatatggccctggccaa
ggctatctccagcgaatcaacaagttcggtgatgttttaggtaacatcaccctggggatg
aatttcacacaggacgaaatcgacaaacagctcattcaatatgtacacacaggccaggag
ggaatccgtgacctgctgaaatttgatgtcacagatggtatcaatcccctaattgaccgt
tacttttacatcaacattggaagcatcgacatggtcttcccagatgttatcaacaaaggc
gtgactctcaaggaaggagggaaagtcactctcaccactgacctcctcagcaccactgat
atcaacagtcctgatgaatacctcagttttagcatcacaagagcacctagcagaggccac
ttagagagcactgaccacccaggcgttcccatttccaccttcacacaactgcagcttgct
ggcaacaagatctactacatccatacctctgatgatgagatgaaaatggacagctttgag
tttgaggtaacagatggttacaatcctgtcttccgaaccttcagggtgtctatcactgat
gtagataataagaaacctgtgctgactataagcaggttggttgtggaagagggagaaacc
aagctcatcacaccatttgagttgacagctgaggatcgggacaccccagacaacctgttg
cgcttcatagtcacccaggtgccagtgcatgggcagctgcttttcaacaatacccaacca
atcacaacctttactaagcaagatctgaatgaaaaccttattagttataaccatgacggc
actgagaccaatgaagacagcttttccttcacactcacagatggcacacatactgatttc
tacgtctttcctgacacggtgtatgagacacacaaaccacagatgatgaccattcacatc
aacacagtggacaatggtgtgccccagattgtggtcaataaggctgcagcatcactgaag
gtcctccaatctggccacctgggctttgtgatcaccagcaagacccttagatcagaggat
cgcgacagtccccacagggtcctgaaatacagtgtgtctgaggctcctctacatggcttt
atcatgaacactgccctgggcaatgacagcatcaaaaccttcacacaagctgatatcaat
gacatgaagatctgttacgtgctgttggatgggagcaacgccacaagtgatatcttctac
ttctcagttgaagacaacggtggaaacaaactaaagccccagcctttccggctcaactgg
gcctggatctctctagagagggaatactacttggtggacgaggacgccaaattcctggag
gtgacactgaaacgcagaggctacctgggggaaacctccttcgtcagtattgccactaag
gatggcacagccgagaaggataaggatttccgtggtaaagcccagaaacaggtccagttc
aaccccgggcagactacagctacctggaaggtgaagatcttcacagaccaggagtttgag
aactcagagacctttgagatacagctgtctgacccagtcatgggcgtgctggagtttcca
gacattgccacagtggagattgtggatcctggagatgaatcgacagtgttcattcctcaa
gcagagttcaggatcgaggaggatattggagagctgttagtgccggtacggcgctcagga
gatgccagccaggaactcatggttgtttgttacactcagcaagccacggccactggcacc
atacccagcactgtcttgtcctattctgattacatcacccggcctgaggaccacaccagc
gttctgcgctttgataaggacgagcgcgagaaaccctgtcgcatcatcatcatcgatgac
tccctgtatgaggaggaagagagcttcaatgtcagcctcagcatgcccatgggcggccaa
gtgggcgccaacttcccaaccgccaaagtcaccatcttggcagacagcgacgatgagcct
tcgttgtactttggagaacctgagtatgttgtggaggagagttcaggctacgttgaggtg
aaggtttggaggacaggaaccgatctgtccaagacggctactgtcaccgtccgctccagg
aagagcgatcccgtctctgcagaagctggactagactacgtcggcattagtcgcaaccta
gactttgctcctggagtgacaatgcagacatttagagtgaccatcctggatgatctgggt
cagccggagctagaggggcctgagacctttgaccttgtcttacggatgcccatgaacgct
gtgttaggagaaccaagcaagaccaccatcaccatcaatgataccgtcactgacgtgcca
aagcttcagtttaaggaaggcagctacaaggtggatgagtctgatggggaggtaaaagcc
atagtgtaccgtagtggagacgtcagcctcgggtccacagtgcgctgttacactcgccag
ggctcggctcaggtcatgatggactacagtgagaggcccaatactgatgcgtcaatcatc
actttccaaccaggggagactgagaagccgtgtgtggttagcctgatggacaactctgtc
catgaagaggacgaggagtttcgcttggtcctgggaactccaaagagcaagtctccgtat
ggagcctctatcggggaacagaaggaagcactggtcacaatcacagatgagaaggacaag
cccatcatccgcttctctgagatcaagtacagtgtgcgtgaaccccaggtcaaaggagag
gtggcaatagtgaagattcctatcctgcgtattggagacacctcaaaggtctcagtggtg
agagtgcacaccaaagatggctctgcaacctctggagatgactacaacccactgtcagag
gatgtcgagttcaaggagggcgagagggaacactttgtggagattgagatcctatatgac
ggtcagagagagatgagagaggccttcactgtacacatgaagcctgatgacaacatggtg
gctgaaatacagatgaacaaggccattgtgtacattgaggaagtggacagtgtcgcagac
gttaccttccctgcagtgccccaggtggtttccctgctcatgtatgatgacactgttaaa
accaaagacaagccccacccgcccaatggataccctgttgtgtgtgtgacggcctgcaac
cctaagtaccacgactttgataaaaccggttccatctgctctgcggagaacattaacgac
actctaacccagtaccgctggctggtcagcgctcccactgggtcagatggagtgaccagc
cccatgagggaggtggacactaacacttttttcaccaacaccaagtccatcaccttagat
tcaatctacttccaagctggctccagggttcagtgtgcagcaagagccttcaatgccaac
ggagatgcaggcctggagctatccagtcccattgttgtaatcagcaaggaggaaggtatg
tgtcagcctcgtatcccaggtacggttggagctgaacctttctccgctaagatccggtac
acaggcccagatgacccggacttccccaacctgatcaaactgactgtcaacatgcctcac
atggatggcatgttaccagtgatctccacaagacctctgtccaactttgagcttaccctg
agcccagacggcacacgtgtgggcaaccaccgctgctccaacttactggacttcaatgag
atccaaaccggccatggcttcatcactgatgcaacaaagaacccggaaatcattggcgag
acttcgccctaccaatacagtgctatcatacgttcagccaactctctgcgcttctacagg
aacctgaacttagaggcctgcctctgggagttcaccagctactacgacatgtcagagctg
ctgaatgactgcggaggctccataggcaccgatggacaggtgctgaacctcgtgcagtcc
tacgtcaccgtgcgcgttccactctttgtgtcctacgtcttccactctcctgtggctgtg
ggaggctggcagcactttgacctgcagtcagagctcaagctcacctttgtgtatgataca
gctattctgtggcaggacggcatcggcagccctcctgaagctgagctacaaggagccatg
ttccccacaagtatgcgtataaatgaggagggccgtctggtggtcaacttcaagaccgag
gctcgcttcagaggacagtttgttatgtctcatccaggcaccagcatgtcatccatggtg
atgtgtgctgaccaccttgggctgaccttctctctcgccctggtcaggactgagcctacc
tacaaccagcccatgcagcagtggagttttgtctcagactttgctgtgcgagactactct
gggacctacacagtgaagttgatcccctgcattgcctcccccaatggggagtttagcatc
cctcctgtctgccacccaagagagcctattacctttgacatggacatacgcttccagcag
gtgagtgacccagtggcagctgagtttagcctcaacactcagatgttcctgctgtccaag
agggagttgtggttgtctgatggctccatgggctttggagaagggaccgatgctgctttt
tcagagggctccatgatctacggtcgtgtgatggtggacccagtccagaacctgggtgac
tccttctcctgcagcattgagaaggtcttcctctgcacaggagcagatggttacgttccc
aaatacaaccccactaacaaggagtatggatgcctggcagatgctccatctctgctttac
agattcaagatcctggacaaggcccagccagagactcaagcttcagcttttggtgatgtt
gcttttaaggctacgctggcccaagacacaactggagctctgcctttggtcaaacaaccg
ggatcagatggcttcacactgtcctcttctccactcttccaggtggccgctggtcgagaa
tggttcatccacactatctacactgtccgctccagagaaaacgccaaccgcaacattggc
aagcgcagtgtggagtatctccatcacagcgtatcctctgttgagcagccccagggctcc
gacagagccactcgccaccgccgtgccgcccctgctttctctggccctgctctggcccag
gacatcggtgtcgaaaacaaccggggaaccaacattcagcacatcggtctggaccgaaca
gaccgcatggtggtcagccagcaccaaccctggtcccctaaccgtgaccctctcctggat
cgccccttgctggagagctctggcagagaggccgctgacacctcaaccctgcccatgtta
gtgggcctcgcaggtctgatccttctcatctgcctcatcgccaccattgtcattctgctg
ctgcggcgcaaaaagagggaaaagaaaacccagttccctccttacaccacctcctcctct
tctgcctacagtggctacagccaaggcccagtgggcatgttggggagttcagacagctct
gaggtctag
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integrated database retrieval system
