Xiphias gladius (swordfish): 120800485
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Entry
120800485 CDS
T07311
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120800485 (rnf38)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120800485 (rnf38)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120800485 (rnf38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120800485
NCBI-ProteinID:
XP_040002551
LinkDB
All DBs
Position
LG15
Genome browser
AA seq
740 aa
AA seq
DB search
MPIAAAGQPTTQEPRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLGGY
SYSQSGARGFVQPGSTNGSPPQSPAASSSFLFHPLHPHQMAMEPPRTRSRSRSGYYQQYG
GGNGTGITGSGVMGSNHHHHHQQQQLHPQQQHGAGCAPLGAHSNHLENQQRAPGSNASPG
IQRLSSVPGAHRIPTAGASGGSYHCHPDHAYGEESDKSEESPSPKRQRLSSQSVLEQLTS
SAPPPSTPSPPIRPWESGPPSRRQPHPHTHYHQERCLTPARHRRSPPARRQRGRLSRPTR
HLPPHHQPSTQGPAPRLSPSERQDENYHHNPHPSTHQTYPTHTPSTYGQPPTAGGGGAGS
EEPRAFHPPTLSPRLLHPAAHHHHHLHQQQHHAAQQQQGAMVMDLHEQLQQGSVPVSYTV
TPVPPHGLAAPLCSGQHLPPTCSSQQQVPACSVVFSTGQHYHPMLQACSMQHLPVPYAFP
SLLSSDPQFLLPPPPHLSHHPSHLPTPGQFLPFQTQQPRSPLQTIENEVELLGEQLSVGG
GFSYAHHHHHHHHHHQPPSTLPPSTPIQFLSHHDPLSQELFTVPYPHFMPRRFTSRRYRS
QQAVPPSPYHPSFLPYFLSMLPVPPNVAPTISLELDVDDGEVENYEALLNLAERLGEAKP
RGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK
ANRTCPICRADASEVQRDSE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaacaacccaggagcccagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtcggcggagcgaacagagtacgggggcgcagaggggggcagaggacttgggggctat
agttacagccagagcggcgctaggggctttgtacagcccggatcaaccaacggctctccg
ccgcagtccccagccgcgtcctcatcgtttctcttccaccccctccacccccaccaaatg
gccatggagcccccaaggactcgatcgcgctctcggtctggatattaccagcagtacggt
ggtggaaatggcactggaattaccggcagcggagtcatgggatctaaccatcaccaccac
catcaacaacagcaactacatccacagcagcagcacggtgccggttgcgcaccacttgga
gctcacagcaaccacttggagaaccagcagcgagccccaggaagtaacgcctctcccggc
attcaaaggctttcttcggttcccggggcgcaccgcatcccgacggcaggagcctctggt
ggatcttaccactgccacccagatcatgcatatggagaggagagtgataagagtgaggaa
agccccagtccaaagcgccagaggctgtccagtcagtctgtcttggaacaactaacctca
tccgcccctccaccatccaccccatctccccccatccgtccctgggagtcaggaccccca
agtcggagacaacctcacccccacacacactaccaccaggagagatgcctcactcctgct
cggcacagacgcagcccaccagcaaggcgtcagcgcggccgtctctccagacccacccgt
cacttgcctccccaccaccaaccctccacccaaggccctgcaccccgcctgtcgccatcg
gagcgccaggatgaaaactaccaccacaacccccatccctccacgcaccaaacatatcca
acgcatacgcccagcacctacggtcagcccccaacagctggtggtggtggggcagggtcg
gaggagccccgagctttccacccccccacattgtcaccacggcttctgcatccagctgct
caccaccaccatcacctccatcagcaacagcatcatgcagcgcaacagcagcaaggagcc
atggtcatggacttgcatgaacagctgcagcagggcagcgtaccagtctcctacacagtg
accccagtccctcctcatggtctcgcagcacctttgtgtagcggtcagcaccttccccct
acctgttcttcacaacaacaggtccccgcctgcagtgtggtcttcagcactggacaacac
tatcacccgatgctacaggcatgttcaatgcaacatttgccagtgccctatgcctttccc
tcactgctgtccagtgaccctcaattcctgcttcctcctccacctcacctttctcaccac
ccgtcccacctccccacaccgggacagttcctgcctttccagacacaacagcctcgatcg
ccgttacagacgattgaaaatgaggttgagcttctgggagagcagctttcagtgggtgga
ggcttcagctatgcccaccaccatcaccaccaccatcaccaccaccagcctccctccacc
ctgcccccctccacaccaatccagttcctctcacaccatgaccccctttcacaggagctc
tttacagtgccctatccccactttatgcctcgtcgattcacaagccggcgttaccgctct
caacaagctgttcccccatcaccctatcaccccagcttcctgccttacttcctgtccatg
cttcccgtgcccccaaatgtggcccccactataagtctagagctggatgtggatgacgga
gaggtggagaactacgaggccctgttgaaccttgcagagcgtctaggagaggccaagccc
cgtggtctaactaaggcagatatagaacagcttccatcatacaggttcaaccccaacaac
catcagtctgagcaaacactgtgcgtggtatgtatgtgtgacttcgagtctcgccagctc
ctaagggtcctgccctgtaatcacgagttccatgccaaatgtgtagataagtggcttaag
gctaaccggacctgtcccatctgtcgagctgatgcctctgaggtccagcgggactctgag
tga
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