Xiphias gladius (swordfish): 120800568
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Entry
120800568 CDS
T07311
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120800568 (irx5a)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120800568 (irx5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
120800568
NCBI-ProteinID:
XP_040002731
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Position
LG1:10708416..10712295
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AA seq
457 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAYR
KNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPSKPTDKGDSTDTEADHKLLNPGDIGCDRFKEES
HGKDPDPLLSDSELKDQEERTTDLLPDSAKPTTSSPSAVPRGNQTVAQQDKPSDLSHAPG
TVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDKCKGSGEAPQACPGLGQSAVMGPGASPS
RSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQTV
LNRAEALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcctctttagccctgtattcatgc
cctgcgtacagcacgagcgttatatccggaccccgaaccgaggaacttgggagatcctct
tcgggatctgcttttgcgccctatgccggatctactgcgttcaccagcgcctcgccgggc
tacaactcccacttaccgtacagtgcagacgcggcggccgctgccacattcacctcgtac
gtggtgagtaaactaaagagttctccctacgaccacaccacgggtatggccggctcgata
ggataccacccttacgcagcacccttgggcacctacccttacggcgacccagcgtaccgt
aaaaacgcaacgcgggacgccactgctaccctgaaggcctggctcaacgagcaccgcaag
aacccctaccccaccaagggggagaagatcatgctggccatcatcaccaagatgaccctc
acccaggtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatg
acctggaccccccggaaccggagcgaggacgaggaagaggacgagaatattgatttggag
aaaaatgacgacgacgagccaagcaagcccacagacaagggagactccacagacacagaa
gcagatcataaactgctgaacccaggggacataggctgtgacagatttaaagaggagagc
catggcaaagacccggatccccttctgagcgactcggagttaaaagaccaggaggagcgg
actacagacttgctgccggattccgcaaaaccaaccacttcgtctccctcggctgttccc
cgggggaaccagaccgttgcgcaacaagacaagccgtcagatttgagccacgcaccgggt
acggtgaccagcaacgtgacctctgttatccactcgcccccttcggcccctaaacccaaa
ctctggtcacttgcggagatcgccacgtcctcagacaagtgtaagggcagcggcgaggcg
ccacaggcttgtcccgggttgggtcagagcgcggtaatgggccccggcgcgtctccatct
cggtcctcccctcagtgcccgctccccaacagcacggtcctatccaggcctctgtactac
acctcccctttctacccgggctacacgaactatggtggcagctttggacaccttcacagt
aaccacggctcggtaaccacgggctccacggcacatttcaatggattaaaccagactgtg
ttaaatagagcagaggctttggtaagggagagccagaaagtcagaggccaaacgcaggta
gatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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