Xiphias gladius (swordfish): 120800578
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Entry
120800578 CDS
T07311
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120800578
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120800578
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120800578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120800578
NCBI-ProteinID:
XP_040002713
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Position
LG15
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLAIKKDEEVLKKNCPHIVVGTPGRILALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaacgacgttgataatgaacttctggactatgaggaggatgaggaaccccag
ggagcccctgagagtggtaccccagcgaacaaaaaggaggtgaaggggtcctacgtatcc
atccacagctcaggcttcagagactttctcctcaaaccagagcttctccgtgccattgtc
gactgtggttttgagcatccctcagaagtccaacatgagtgtattcctcaagctatcctg
gggatggacatcctgtgtcaggccaagtctggtatgggaaagacagcagtgttcgtactg
gccaccctgcagcagatagaacctgtggatggtcaggtgtctgtccttgtgatgtgtcac
acgcgagagttggctttccagatcagcaaagagtacgagcgcttctccaagtacatgcca
agtgtaaaggtgtcagtgttctttggtggccttgccatcaagaaggacgaagaagtcctg
aagaagaactgccctcacattgtcgtgggaactccaggacgtatcctagccctcatccgc
aacaagaccctcagtgtgaagaacataaaacactttgtgcttgacgagtgtgataagatg
ctggagcagctggacatgaggcgtgatgtccaagaaatcttcaggctgacaccccatgag
aagcaagttatgatgttcagtgcaacgctaagcaaggagatccgccctgtttgccgcaag
ttcatgcaggatccgatggaagtgtttgtggatgacgagaccaagctgacactccatggc
ttacagcagtattattgcaagttgaaggacagtgagaagaaccgaaagctgttcgacctg
ctcgatgtgctcgagttcaaccaggtggtgatctttgtgaagtcagtgcatcgctgtgtg
gctctgtctcagctgctggtggagcagaacttccctgctattgccatccataggggcatg
gcacaggaggagaggttatcccggtatcagcagtttaaagacttccagcggcggatcttg
gtggcaaccaacctgtttggccgtggcatggacattgagcgagtcaacatcgtcttcaac
tacgacatgccagaggattctgacacttaccttcacagagtggcccgtgctggcaggttt
gggaccaaaggtctggccatcacctttgtgtcagatgagacagatgccaagaccctgaat
gaggtccaagaccgctttgaggtcaatgtagcagagctaccagaggagattgatatttcc
tcctacattgaacagtccagatga
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