Xiphias gladius (swordfish): 120800599
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Entry
120800599 CDS
T07311
Symbol
si:ch211-79m20.1
Name
(RefSeq) basic-leucine zipper transcription factor A isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
xgl04020
Calcium signaling pathway
xgl04510
Focal adhesion
xgl04540
Gap junction
xgl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120800599 (si:ch211-79m20.1)
04020 Calcium signaling pathway
120800599 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120800599 (si:ch211-79m20.1)
04540 Gap junction
120800599 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120800599 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xgl04052
]
120800599 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120800599 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
xgl04052
]
Cytokines
Growth factors (RTK binding)
120800599 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120800599 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
120800599
NCBI-ProteinID:
XP_040002744
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Position
LG15:7034715..7051762
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AA seq
564 aa
AA seq
DB search
MRSWVLLLLLAALSAARLRLGSAEGDPLPPSLVDLVRNSPISSVDDLKLLLQQETSAIEE
EEENEHDILTNHTHGRYTRSLVEAQPAQQAACKVRTEVMEVTRSMLDRRNANFMLWPPCV
EVQRCSGCCNTRLLQCVPTVTSSRYLQVFKIQYINRKAHYDKAVISVEDHVSCRCQSTIP
SSSSSSSSSSSLPITHSSIQSNPNPLPPPPQQPPPSSHLPLSLPRSVHPASPKTQASKAD
LHRHDDLKHNQQRYHPEEREPVARQWQQGSYTQLVHWTQPRVHQPIGGVLGSVRNWPSEA
RGEHSVMGSTQQVGPGSGYEGSREEGSVHVANSDGEAHHPDHAERQQQVLQHQQRQQHQQ
QYQYHNPQQYNHGRAEDQELRVQYRLNAPQSDSATPAHGPTQPPKLEQNPTPPLTTNQKD
SVTSQKNTEVTNHKQTETETVSQKVGNEREESGSANSRDSAGAELANQEKEKDSKLTRGD
GHLTEEERRQKLLEMVQREPDKQTHLHPHHPLQRPKPTAFKTALYTVAPVSPSARQAPFR
PASPRRRRKHRKRISKAAIRAMIM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtccttctgctgctgctggctgcgctctcggcggcccgtctgcggctc
ggcagtgctgagggcgatcctctccccccgtcgctggtcgacctggtgaggaactctccc
atctcctccgtggacgacctaaaactgctgctgcagcaggagaccagtgcaattgaagaa
gaagaagaaaacgagcatgatattctcacaaaccacacccatggtcgatacactagaagt
cttgtggaggcgcagccggcccagcaggcagcctgtaaagttcgcacagaggtgatggag
gtgacgaggtccatgctggaccgccgcaatgccaacttcatgctgtggccaccgtgcgtg
gaggtgcagagatgttcgggctgctgcaacacgaggcttctgcagtgcgtccccaccgtc
acctccagcagataccttcaggtgtttaaaatccagtacattaacaggaaagcccactac
gacaaagccgtaatctcagtggaagatcacgtcagctgcaggtgccaatctaccatacct
tcctcatcctcttcatcttcttcctcctcgtcccttccgatcactcactcttccatccag
agcaaccccaatccccttccacctccaccacagcagcctcccccttcctcccaccttccc
ctgtcccttccccgttccgttcaccctgcttcgcccaagactcaagcctccaaggccgac
ctccatcgccacgatgacctgaagcacaaccagcagcgctaccatcctgaggagcgtgag
ccggtggcaaggcagtggcagcagggcagctacacccagctggtgcactggacgcagccc
agggtgcaccagcctatcgggggggttctcgggtctgtccgcaactggccatcggaggca
aggggagagcatagtgtcatgggaagtacacagcaggtcgggcccgggagtgggtatgaa
gggagcagggaggaaggcagcgtgcatgtagcaaacagtgatggtgaagcgcatcatcct
gatcacgcagagaggcagcaacaggtcttacagcatcagcagagacagcagcatcagcag
caatatcagtatcataacccgcagcagtacaaccacggacgagcggaggatcaagagctg
agggtgcagtatcgactcaacgctccccaatcggacagcgccaccccagctcacggccca
acccagccacccaaattagaacaaaaccccacccctcctctaaccacgaatcagaaagac
tcagtgaccagccaaaaaaacacagaggtcacaaatcacaaacagactgagactgaaaca
gtcagtcaaaaagtagggaacgagagggaggaaagtgggtcagccaatagcagggactcg
gctggtgcggagctggccaatcaggagaaggaaaaagactctaagctaaccagaggagat
ggtcatttaacagaggaggagaggagacagaaacttctggagatggtacagagggaaccg
gataaacagactcatcttcatccgcatcatccactgcaaagaccaaagccaactgcattt
aaaacagccctctacaccgtggcgcccgtctcaccctctgcacgtcaggccccgttccgt
ccggcctcgcctcgtcgcaggaggaaacaccgcaagcgcatcagcaaagcagccatcaga
gccatgatcatgtag
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