Xiphias gladius (swordfish): 120800599
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Entry
120800599 CDS
T07311
Symbol
si:ch211-79m20.1
Name
(RefSeq) basic-leucine zipper transcription factor A isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
xgl04020
Calcium signaling pathway
xgl04510
Focal adhesion
xgl04518
Integrin signaling
xgl04540
Gap junction
xgl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120800599 (si:ch211-79m20.1)
04020 Calcium signaling pathway
120800599 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
120800599 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120800599 (si:ch211-79m20.1)
04540 Gap junction
120800599 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120800599 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xgl04052
]
120800599 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120800599 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
xgl04052
]
Cytokines
Growth factors (RTK binding)
120800599 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120800599 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
120800599
NCBI-ProteinID:
XP_040002744
LinkDB
All DBs
Position
LG15:7034715..7051762
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AA seq
564 aa
AA seq
DB search
MRSWVLLLLLAALSAARLRLGSAEGDPLPPSLVDLVRNSPISSVDDLKLLLQQETSAIEE
EEENEHDILTNHTHGRYTRSLVEAQPAQQAACKVRTEVMEVTRSMLDRRNANFMLWPPCV
EVQRCSGCCNTRLLQCVPTVTSSRYLQVFKIQYINRKAHYDKAVISVEDHVSCRCQSTIP
SSSSSSSSSSSLPITHSSIQSNPNPLPPPPQQPPPSSHLPLSLPRSVHPASPKTQASKAD
LHRHDDLKHNQQRYHPEEREPVARQWQQGSYTQLVHWTQPRVHQPIGGVLGSVRNWPSEA
RGEHSVMGSTQQVGPGSGYEGSREEGSVHVANSDGEAHHPDHAERQQQVLQHQQRQQHQQ
QYQYHNPQQYNHGRAEDQELRVQYRLNAPQSDSATPAHGPTQPPKLEQNPTPPLTTNQKD
SVTSQKNTEVTNHKQTETETVSQKVGNEREESGSANSRDSAGAELANQEKEKDSKLTRGD
GHLTEEERRQKLLEMVQREPDKQTHLHPHHPLQRPKPTAFKTALYTVAPVSPSARQAPFR
PASPRRRRKHRKRISKAAIRAMIM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtccttctgctgctgctggctgcgctctcggcggcccgtctgcggctc
ggcagtgctgagggcgatcctctccccccgtcgctggtcgacctggtgaggaactctccc
atctcctccgtggacgacctaaaactgctgctgcagcaggagaccagtgcaattgaagaa
gaagaagaaaacgagcatgatattctcacaaaccacacccatggtcgatacactagaagt
cttgtggaggcgcagccggcccagcaggcagcctgtaaagttcgcacagaggtgatggag
gtgacgaggtccatgctggaccgccgcaatgccaacttcatgctgtggccaccgtgcgtg
gaggtgcagagatgttcgggctgctgcaacacgaggcttctgcagtgcgtccccaccgtc
acctccagcagataccttcaggtgtttaaaatccagtacattaacaggaaagcccactac
gacaaagccgtaatctcagtggaagatcacgtcagctgcaggtgccaatctaccatacct
tcctcatcctcttcatcttcttcctcctcgtcccttccgatcactcactcttccatccag
agcaaccccaatccccttccacctccaccacagcagcctcccccttcctcccaccttccc
ctgtcccttccccgttccgttcaccctgcttcgcccaagactcaagcctccaaggccgac
ctccatcgccacgatgacctgaagcacaaccagcagcgctaccatcctgaggagcgtgag
ccggtggcaaggcagtggcagcagggcagctacacccagctggtgcactggacgcagccc
agggtgcaccagcctatcgggggggttctcgggtctgtccgcaactggccatcggaggca
aggggagagcatagtgtcatgggaagtacacagcaggtcgggcccgggagtgggtatgaa
gggagcagggaggaaggcagcgtgcatgtagcaaacagtgatggtgaagcgcatcatcct
gatcacgcagagaggcagcaacaggtcttacagcatcagcagagacagcagcatcagcag
caatatcagtatcataacccgcagcagtacaaccacggacgagcggaggatcaagagctg
agggtgcagtatcgactcaacgctccccaatcggacagcgccaccccagctcacggccca
acccagccacccaaattagaacaaaaccccacccctcctctaaccacgaatcagaaagac
tcagtgaccagccaaaaaaacacagaggtcacaaatcacaaacagactgagactgaaaca
gtcagtcaaaaagtagggaacgagagggaggaaagtgggtcagccaatagcagggactcg
gctggtgcggagctggccaatcaggagaaggaaaaagactctaagctaaccagaggagat
ggtcatttaacagaggaggagaggagacagaaacttctggagatggtacagagggaaccg
gataaacagactcatcttcatccgcatcatccactgcaaagaccaaagccaactgcattt
aaaacagccctctacaccgtggcgcccgtctcaccctctgcacgtcaggccccgttccgt
ccggcctcgcctcgtcgcaggaggaaacaccgcaagcgcatcagcaaagcagccatcaga
gccatgatcatgtag
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