Xiphias gladius (swordfish): 120800760
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Entry
120800760 CDS
T07311
Name
(RefSeq) B-cell receptor CD22-like isoform X1
KO
K06467
CD22 antigen
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120800760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120800760
04090 CD molecules [BR:
xgl04090
]
120800760
04091 Lectins [BR:
xgl04091
]
120800760
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
SIGLEC family
120800760
CD molecules [BR:
xgl04090
]
Proteins
120800760
Lectins [BR:
xgl04091
]
I-type lectins (Siglecs)
120800760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_CD22
Ig_5
C2-set_2
PKD
Motif
Other DBs
NCBI-GeneID:
120800760
NCBI-ProteinID:
XP_040003016
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All DBs
Position
LG15:5377787..5391480
Genome browser
AA seq
944 aa
AA seq
DB search
MRLKMSVFPPVSLNISLVSLGCCDVGDTGLVLTSQETSFSHSHSPTEMRGAAVSLTAAAS
GFVVLLLTVPVVRGYNGWGVTYTSTKICALKGSTVEMNCTYRFPSRINSVSTKVEETFWF
TKASNNIYADLRTDPDYSDRVEYRCKNNDCTLRITDLRESDSAEYKFRFITNQPGGSFTG
SPGVTLSVTGLQVQLSSPGVRTYDRSAELMCRSNCRLPDHTSYIWYKNQKEILRRKLNSL
NNFELRNHYSCAVQGHEDFPSSSLLVQGQVNWGVTYAPAQICAFRGSTVEMNCTYRFPSR
INSVSTKVEETFWFTKLQDKEPVDLRTDSEYAGRLAYSRGKNNDCTLRITDLRASDSAEY
KFRFKTNLPGGSFTGSPGVTLSVTDPQLQVRVRRSTVNPYSTWTELTCHSNCQPSHHLSY
TWYKNENSVEGGEEKYFHLHTSGPGDKYHCAIGGDVPVRSPPVYAPEFPAVSVSPSGEIV
EGSPVTLNCSSNASPAANYTWYKEDANPGLPSLQKSLSFGSIKSSDSGRYYCRAENELGW
MSAPTVIVVKYAPKLLSMSATPSGEIVEGSSVNLTCSSDANPAANYTWYKGNQTLLQGPE
GFYHFTSISSEDRGFYRCKAENQFGQINSSSLLVDVQYAPKLVSVSASPSGEIMEGSSVN
LTCSSDANPAANYTWYKGNQTLLQGPEGFYHFTSISSEDRGFYRCKAENQFGQINSSSLL
VDVEYAPRLVSVSASPSGDIVEGSSVNLTCSSDANPAANYTWYKGGGDSPQASGQTFAIT
GIRAELGGNYYCEARNRRGRRNNTLHLNVVADFPEAWKSAVIGTITVVVLAIILLSAFLL
IKEKITSKQSSEPVQRIVYSEKCLHSQSEEQDDPDYTNIHFLKNQTDPVCSNIGLAGPCR
RDEEEDDDSVEYTVVKFNSSAPRARSQEIQEDPATLYSTIKTSF
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaaatgtctgtttttcctcctgtgtctttaaacatctctcttgtgtccctg
gggtgttgtgatgtgggtgatacaggcttggtactaacaagccaagaaactagtttctca
cactctcatagtcccacagagatgagaggagcagctgtaagtttaaccgcagcagcaagt
ggatttgttgtcctgcttctcactgtgccagtggtacggggttacaatggctggggagtg
acttacacttctactaagatctgcgccttaaaaggatcaacggtggagatgaactgcacc
tacaggttcccatccagaataaactctgtttcaaccaaagttgaggaaacattctggttt
acaaaagcgagtaataacatttacgcggatctgagaacagaccccgactattcggatcgt
gtggagtatcgctgtaaaaacaacgactgcactctgagaatcaccgacctgagagagagc
gactcagcggagtacaagttcaggttcataacaaaccagccaggtgggagttttactggt
tcacctggagtcactttgtctgtcacaggtttgcaggtgcagctgagcagcccaggggtg
cgaacgtatgatcgctcagcagagctcatgtgtcggagcaattgtcgtctacctgatcac
acttcctacatctggtacaagaatcaaaaggaaattttgagaagaaaattgaattcttta
aacaactttgagcttcgaaaccactattcctgtgctgtacaaggacatgaggatttcccc
tcctcttcactgctggtacagggtcaggttaactggggagtgacttacgctcctgctcag
atctgcgccttcagaggatcaacagtggaaatgaactgcacctacaggttcccatccaga
ataaactctgtttcaaccaaagttgaggaaacattctggtttactaaactgcaggataaa
gaacccgtggatctgagaacagactcagagtatgcgggtcgtctggcgtatagtcgtggt
aaaaacaacgactgcactctgagaataaccgacctgagagcgagcgactcagccgagtac
aagttcaggttcaaaacaaacctgccaggtgggagttttactggttcacctggagtcact
ttgtctgtcacagaccctcagctccaggtacgcgtgaggagatcgaccgtcaatccgtac
tctacctggacagagctgacatgtcacagcaattgtcaaccatctcatcatctttcgtac
acctggtacaagaatgaaaattcagttgaaggaggagaagaaaaatattttcacctacac
acaagtggtcctggagacaaatatcactgtgctataggaggagacgtgcctgtccgctct
cctcccgtgtatgctccggagtttcccgctgtgtcagtgagcccctctggtgaaatcgtg
gagggcagcccagtgactctcaactgtagcagcaacgctagccctgcagctaattacacc
tggtacaaggaggatgcaaatccaggccttccgtctctccaaaaatcactttccttcggg
tccattaagtcctcagactctgggcggtattactgtagagctgagaacgagctgggatgg
atgtcagcccccacagttatcgttgtgaaatatgctccaaagctcctctctatgtcagcg
actccctccggtgagatagtggagggcagctccgtgaatctgacctgtagcagtgacgct
aaccccgcagctaattacacctggtacaaggggaaccaaacactgcttcagggaccggaa
ggcttttatcatttcacttccatcagctcagaggacagagggttttaccgctgcaaggct
gagaatcagtttggacagataaattcttcaagcctattagtagatgtccagtatgctcca
aagctcgtctctgtgtcagcgagtccttccggtgagataatggagggcagctccgtgaat
ctgacctgtagcagtgacgctaaccccgcagctaattacacctggtacaaggggaaccaa
acactgcttcagggaccggaaggcttttatcatttcacttccatcagctccgaggacaga
gggttttaccgctgcaaggctgagaatcagtttggacagataaattcttcaagcctatta
gtagatgtcgagtatgctccaaggctcgtctctgtgtcagcgagtccttccggtgacata
gtggagggcagctccgtgaatctgacctgtagcagtgatgctaaccccgcagctaattac
acctggtacaaggggggcggagactcaccacaagcttcgggacagaccttcgccatcacc
ggcatcagagctgaactcggcgggaattattactgcgaagcccggaacagaagaggacgt
cgtaacaacaccttacatcttaatgtcgtggcagatttccctgaagcatggaaatcagca
gtcattggaaccatcactgttgttgtccttgctatcatactcctctctgccttcctactg
ataaaagaaaagattacctccaagcagtcatcggagcctgtacagagaattgtctacagt
gaaaagtgtctacatagtcagtcagaggagcaggatgaccctgactataccaatatccac
ttcttgaagaaccagacagatcctgtctgctccaacatcggactagctggaccctgcaga
cgcgatgaagaggaggacgacgatagtgttgagtacactgttgtcaaatttaacagttct
gccccaagagccagaagtcaggaaattcaggaggatccagctacattgtacagtacaatc
aagacatccttctga
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