Xiphias gladius (swordfish): 120800864
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Entry
120800864 CDS
T07311
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120800864 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120800864 (vps35)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
120800864 (vps35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
120800864
NCBI-ProteinID:
XP_040003265
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All DBs
Position
LG1:4175417..4208938
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEGSEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLPGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPERVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIVAQEQVDAILNLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccacacagcagtctccccaggatgaacaggagaagcttctggatgaagctgtg
caggctgtcaaggtccagtctttccagatgaagcgatgcctggacaagaacaagctgatg
gatgctctgaagcatgcctctaacatgctgggtgagctgaggacctccatgctttctcca
aagagctactatgagctctatatggccatctctgacgaactccactacctagaggtttat
ctgacggatgagtttgccaagggacgcaaggtagcagatctctatgagctggtccagtat
gcagggaacatcatccccagactctatctgttaatcacagtgggtgtggtgtacgttcgc
tccttcccccagtctcgtaaggacattctgaaggacctggtcgaaatgtgtcgtggtgtc
caacacccactcaggggcctcttcctcagaaactacctgttgcaatgcacccgcaacata
ctgccagatgatggggagcagtctgaggggtcagaggagatgaccggtgatatcaatgac
tccatcgactttgtcctgctgaactttgcggaaatgaacaagttatgggttcgaatgcag
catcagggtcacagccgagacagagagaagagagaaaaggaacgacaagaacttaggatt
ctggtgggcaccaacctagttcgcctcagccaactggagggtgtcaacgtggacaagtac
aaacagattgttcttcctggagtgctggaacaagttgtgaactgcagagactcgctggct
caggagtatctaatggagtgcatcattcaggttttcccagatgagttccaccttcagacc
ctgaaccctttcctgcgttcctgtgctgagcttcatcaacacgtcaatgtcaagaacatc
atcattgccctcattgacagacttgctctgtttgctcatcgagaagatggccctggcatt
ccagctgagatcaaactgtttgacatcttctctcaacaagtggcaactgtcattcagtct
cgccaggacatgccatcagaggacgtggtctctctccaggtctccctcatcaatttggca
atgaaatgctatcctgaacgtgttgactatgtagataaggtcctggagagcactgtagag
atattcaacaagctcaacttggaacacatagcgaccagcagcgcagtgtcaaaggaactt
acccgactgttgaagatcccggtggacacctacaacaacatcctgacagtgctacagctc
aagcacttcccaccactcttcgagtactttgactatgagtcacgcaagagcatgagttgc
tatgtgctgagcaacacgctggactacaacaccaccattgtggcacaggaacaggtggat
gccatcttgaatttggtatccacactgatacaagaccaaccagaccagccagctgatgat
cctgaccctgaggactttgctgaggagcagagccttgtgggtcgtttcatccatctgctc
cactctgaagatcctgatcaacagtaccttattctgaacacagctcggaaacactttggt
gcgggtggaaaccaaaggattcgctacacactccctcctctggtgtttgctgcctaccag
ctggccttcagatacaaggaaaactcctcattggatgacaagtgggaaaagaagtgtcag
aagatcttttccttcgcccaccagaccatcagtgcacttattaaggctgagcttgctgag
ctgcctcttcgactcttcctgcagggggcactggctgcaggcgagattggctttgagaac
catgagactgtagcatatgagttcatgtcacaggccttttctctgtatgaggatgagata
agtgactccaaagcccagttggcagccatcacgctgatcattggtacctttgagcgaatg
cgttgtttcagcgaggaaaaccacgagccgctgaggactcagtgtgcactggctgcctcc
aagctgctgaagaagcctgaccagtgccgagccgtcagcatctgcgcccatctcttttgg
tcaggtcgcagcactgacaaaaatggtgaagagatccgtgatggtaagcgggtgatggag
tgtctaaagaaagccctgaagattgccaaccagtgcatggacccatcactgcaagtccag
cttttcattgaaatcctcaacagatacgtctgcttctatgagagagaaaacgatgcggtg
actgtccaggtattaaaccagctgatccaaaagatcagggaagatcttcccaatctggag
gcaagtgaggaaacggagcagatcaacaaacacttccacaatacactggagcatcttcgc
ctgcagagagaatcccctgagtctgagggccctgcctatgagggcctggtcctttaa
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