Xiphias gladius (swordfish): 120800869
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Entry
120800869 CDS
T07311
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgl03009
]
120800869 (utp20)
Ribosome biogenesis [BR:
xgl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120800869 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
120800869
NCBI-ProteinID:
XP_040003235
LinkDB
All DBs
Position
LG2:15446116..15480317
Genome browser
AA seq
2782 aa
AA seq
DB search
MRIKSKSSYHKSENTYRFLTFTERLANVNINVIHRIDRTGSHAEEVETYFSEGVTKWRDL
NLTEHFTTFLKEVSNKSQSFNMLVFHQKLIVESLKTHLAVKNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVTDMTNIYSLYSTLL
AHKKEHIRKFAAESFSFLMRKVPDLDALLTHVFSDLQQHPDKAEGAGQLLFEMCKGVRNM
FHSSAAHALPVALRKLGPTTNPGVSLPWDSVRDALDHMAQAAANHVDRKHFLVLWESLQI
SVVEVFDVMEAKGEEAGQATEQLERLLFILHTLVSHRDGAKITKPEDVCQTVLRLIDNLA
LPAPCSRLLLQIISSLLLGGNISLPKSLIQETVQKVFGSTMGRDLILEFTQEMFTMKNFE
QLFLPSLLRFTAGLFSCGDSLSCHCGLEVLVSLILAKAPPPTDGSMAFETYPLLFTGQTT
GSVFSSREANQGSSTTSEQPAVPELVLSLIRYPEEQTQSITNLSLPWAALVLLPHIRPLA
PDSVVPAVTALLNHLLCEIETEKLGKAGLFIARQALSCLLSLDGSAQLLSLVTVDKITSI
LRKFPKDLSALLLGDLYYTRLSLSGVSEYLSHSALLELYQILHTNLSSNISKIRLLTLRI
LSQFEAELPPHTEVEENVEVQPVFAVCLQAELVPASVQDYRDKLLHLRKLRHDLVQRSLP
KGLPDSFQQVPLRYLIAMLFINFRPLWDAVIELLVSHARGMDSKDFWAVYHEHLEMAAGL
AENELQENDEDYVSNEEEEFNHQSEPGCDIIESGEVGVLFLEQLKLTCDLNERTDFPNFR
SLLWRAMAQFPDRVEPRSRELSPLLLRFIRNEFYPADLLVAPTQDLRKRNDYGLEDSGMS
VEEEEETEEEEQYVEERGRQKRKALPRRAAAKQLIAHLKVFTKFTNPRALYLEGSLRELY
NQLLCHQDQQIQQVVLDCVLTYKDPNIVPYKENLERLLNDKHFKEEIVHFNISEEAGVVD
ASHRAKLIPLLMRILFGRLCSKAGSKFQGKATAASRSSIILRFLAGCQAEELGMFIDLLL
EPVCHHSQGSCLAAVERAVAETDVGAVLPLGRQQSLLNIINMVIQKLGHLIHIYLPKVLQ
ILLCVTASVSTILNNRDQLRAGCISRLKNLRRLGILRIQDFFDGFDFYSFSSDELDAVFQ
AVVWPQVCRLPTESSYSPTPLLKLIHVWCKNARYFPLLARHRPDRPECGVLLNVFGLLSA
KNASPATISMVMDIAESLSTTADFIASETETGLSINNSVFPQPWEGALVTADSLTQGSRL
LQPHISTLLQYLSGVVRNTDRLKKKKFRAQVAKELNILSKVSRFVSDKEQCSVLISLLLP
YLQKGTNPQETEIDILATIQNLLRQCVQPSAFLRPLSKLFSIIHNKLPRQALTAVFQALS
DLDPSLTYITDLATKLNAFDSRHLDEIYFDLRLTAFQEATRQVKDMQTLDLDYISTIIHN
CFHTYEIGDISLADNATLCLSAVIIQLAAVRAGEQIYKDIIQHTILDAVHKGLRSKTRSV
QHEYTTVLACLVKTFPSKKEFIELVQLTDYNDPESDFFEHMKHIQIHRRGRALRKLAKQL
TEGTVVMTSRSLQNYIMPYAMTALLDEKMLKHENMTSASVEVVGAVCRRLTWSKYLYYLK
HFIHILQTAQAEQKLAVSLLVTVLEAFHFDHQTLSREMEAANTREEMENDGVLEKEATTQ
AKGPIAPKPTAVASGLPQSKEELESLISTIHQTVNDSVLPRLHKCLTAKVKRDEEHKAAK
SKDVKDEEVVRIPIAFAMVKLMQTLPPHIMEANLPGILIKVCVLLRNRFQEIRDVARGTL
VKIIETLGCRYLQYLLKEMQGILVKGYQVHVLTFTVYQLLSALSPTLKSGDLDPCMNMLI
DVFNNELFGAVAEEKEVKGIVSKLMEARHSKSMDSCELLGQFCSRESITKLILPLKAILE
TSSCLKVCNRVGAVLRRLVLGLLVNRGMTPQDILLLSHGLVSQSLPLLTKRDREKALAQV
PPDPRVPPPNCLLLHPIPKRGGQKAPVSSRTNMHILVDTGLKLLHLSLKKSRVTSSEASA
LEMLDPFVQLLLNCLHSMHVKVITEALVAFTWLLKFPLPAVEQNADQLTKQLFVLLKDYS
KAGAARGENYHLVQNCFKAITIVVKNVKSNKISETQLQVLLGYAEEDLYDQSRQATAFGL
LKAILSRKLVVPEMEEVMKKIAKLSVNGSNAMIRIHCRQIYLKYLLDYPLGRKLRGHLDF
VVAQLHYEHDTGRESVLEMLAFIFQTFPKNLLLKHSGLFFAPLALVVVNDDSARCKKMAA
MAIKALLTQLDLNHQNTLFSLVNTWLNAEKASLRRLGAQICGLFVEVEEEKFARRLDDLL
PVLERAINPDNYEDIEEEQDEKGADRLLFSYLTLITKLSKHCGLLELSKPHDTLCHIWGH
IEAHLRYPHCWVWLTASQLFGQLFAAQRAEQLVTIWRGEGGDASSKSAATAFITSNLDKK
MRELALSFCHQLQSKFLDTASGEQVIKNLLFIGKMIYLISSDSDITSPQEEVKEEDEQRE
NGVEEEGERGEENEKEEGEDEEEEDEDYKDNRPPSLLWLMKKLSLMATREAAHTPKVPLK
RTCVFKFLGAIAMDMGEEQLGPYLTIIITPLYRELDSTYADQDPTLKNLAQELIELLRRQ
VGLERFSLAFSAVQKEFSERRAARKRHRAMQAVANPDIAAKKKLKKHKNKIEAKKRKIEF
LRPGYKAKKHRSHALKDLAMVQ
NT seq
8349 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcaagtccaagtcttcatatcacaaatcagagaacacctacaggtttctcact
tttactgaaagacttgccaatgtcaacattaatgtcatccatcgcattgacaggactgga
tctcatgcggaggaagtagaaacatacttttctgagggcgtgacaaaatggagagacctc
aacttgacagagcatttcacaacatttttgaaagaggtatccaacaagagccagtcattc
aacatgctagttttccatcagaagttgatagtggagagtctgaaaacacatctggctgtc
aagaatagtctggcctaccaaccgctgctggacctggtggttcagctggccagagacctg
cagactgacttctatccccactttcctgactttttcattctcatcacctcactgctggac
acaaaggatacagaggtcctggagtgggctttcacctgcctctcctacctctacaagtac
ctatggaggctaatggtgacggacatgaccaacatctacagtttgtacagcacattactg
gcacacaagaaggagcacatccgcaagtttgcagcagagagcttctcttttttgatgaga
aaggttccagatcttgatgccctgctgactcacgtgttctcagacctgcagcagcacccc
gataaggctgaaggagctggtcagctgctgtttgagatgtgcaaaggagtcagaaacatg
ttccattccagcgctgcacatgctctccctgtggctctgcgtaagctcggtccaacaacc
aacccaggtgtctctctgccttgggactctgtcagggatgctctggatcacatggcccag
gctgcagccaatcatgttgacagaaaacacttcctggttttatgggagtccctgcagatc
agtgtggtggaggtctttgatgttatggaggcaaagggagaggaggcaggtcaagcaaca
gagcagctggagaggctgctgttcattctccacaccctggtgtcccacagagacggagcc
aagatcaccaagccggaggatgtctgccagacagtgttgaggctgattgacaacttggct
ctgccagctccctgttcccgcctgctcctccagatcatctcctctctgctcctcgggggg
aatattagcctgcccaaatcactcatccaggagacagtccaaaaggtgtttggcagcaca
atggggcgagacctgatcttagagttcacccaggagatgttcaccatgaaaaattttgaa
cagcttttcctccccagcctgctacgtttcactgctggtttgttcagttgtggcgattcc
ttgtcttgccactgtggcctggaggttctagtcagcctgatccttgccaaagctccaccc
ccgacagatggctccatggcctttgaaacctacccactgctcttcaccggacagaccaca
ggcagtgtgtttagcagtagggaggcaaatcaggggagcagtacaacatcagagcagcca
gcagtgccagagctggtactgtctctgattagatatcctgaggagcagacacagtccatc
actaacctgtctctgccttgggcggccctggtgctgctgccacacatcagacctctggcc
ccagatagtgttgttcctgctgtgactgctctcttaaaccacctcctgtgtgagattgag
acagagaaactgggcaaagctggtcttttcattgccagacaggccctgagctgcctcctc
agtctggatggctctgcccagcttctctcactggtaactgtggacaagatcacttcaatc
ctaagaaagtttcccaaagacttgtctgccttgctgctaggagacctctactatacccgc
ctgtcactcagcggtgtttcagagtatctatcccacagtgcactgctggagctctaccag
attctgcacaccaacctctcctccaacatctctaagattcgtcttttgactctgaggatt
ctctctcaatttgaagcagagctccctccgcacactgaggttgaggagaatgtggaggtg
cagccagtgtttgcagtttgcctgcaggcagagctggtgccggcttcagtgcaggactac
agagacaaactgcttcacctccggaagctgagacacgacctggtgcagcgcagcctacca
aaggggctgcccgactccttccaacaggtgcctctgcgttacctcatcgcaatgctgttc
ataaacttcaggccactttgggatgcagtcattgaactacttgtgagccacgccagaggg
atggacagcaaggacttctgggcggtctaccatgaacatctggagatggcggcagggctg
gctgaaaatgaactgcaggagaatgatgaagattatgttagtaatgaggaggaagagttc
aatcatcagagtgagccaggctgtgacatcattgaaagtggagaagtgggggtgctgttc
ctagagcagctgaagttgacctgtgacctcaatgagaggacagatttccccaacttccgc
agcctgctgtggcgtgccatggcacagtttcctgacagagtggaaccacgcagccgagag
ttgagtcctttgctgctcaggttcatcaggaatgagttttatcctgccgacctgctggta
gcccccactcaggacctgaggaagaggaatgattatgggctagaggattctggcatgtct
gtggaggaagaggaggagacagaagaagaggagcagtatgtggaggaaagaggccgacag
aagaggaaggcacttccaaggagagctgctgccaaacagctgattgcccatctgaaagtt
tttaccaaattcaccaaccctcgtgctctctacctggagggaagtcttagggagctctat
aaccagttgctctgccatcaggaccagcagattcagcaagtggtgctagattgtgttctc
acatacaaagaccccaacatagtaccatacaaggagaatcttgagaggctactgaatgac
aaacacttcaaggaggagattgtccattttaacatttctgaggaggcaggagtggtggat
gcttcacacagagccaaattgatcccacttcttatgaggatcctgtttgggcgtctgtgc
agtaaagcaggtagtaagttccaggggaaagccactgccgcctcccggtcttcgatcatt
ctgcgtttcctggcaggttgccaggctgaggagctgggaatgttcatcgacctgctgctc
gagcccgtctgccatcacagccaaggttcctgtctggcagcagtggagagggcagttgct
gagacagacgttggtgccgtcctgccactgggccgtcagcaaagcctgctgaacatcatc
aatatggtgatccagaaactgggccacctcatccacatctacctgcccaaagtgctgcag
atcctgctatgtgtcaccgcctctgtgtccaccatcttgaacaacagggaccagctgagg
gcaggttgcatcagtcgtttgaagaacctaaggcgactcggcattctgcgaatccaggac
ttttttgacgggtttgacttttacagctttagttcagacgagctggatgctgtctttcag
gctgtggtctggcctcaggtgtgtcgtctccccacagagagctcctactcaccgacccct
ctgctcaaactcatccatgtgtggtgcaaaaatgccaggtacttccctcttctggccagg
cacagaccagaccgaccagagtgtggtgtcctcctaaatgtctttggcctcctctctgcc
aagaacgcttccccagcgaccatctccatggtaatggacatagctgagtctctatcaaca
acagcagactttattgcctcagagacagagacagggctgagcatcaacaacagtgtgttc
ccgcagccttgggagggtgctcttgtcacggcagattcattaactcagggctccagactg
ctgcagcctcacatctccactctgctgcagtacctcagtggagttgtacgcaacactgac
aggctcaagaaaaaaaagttcagggcgcaggtggccaaggagctcaacatcctctccaag
gtcagtcgatttgtgagcgacaaggagcagtgctcagtgctcatcagcctgttgctgccc
tacctccagaagggcaccaaccctcaagagacagaaattgacatcttggccaccatacaa
aacttgctgcgacagtgtgtgcagccctctgccttcctgcgccctctcagcaaactcttc
tccatcatccacaacaagctgcccaggcaggccctcactgctgtcttccaggctctgtca
gatctggacccttcactcacatatatcactgatttagcaacaaagctcaacgcgtttgac
agtcgacacttggatgagatctactttgacctgcgtctgacagcttttcaagaagctacc
aggcaggtcaaagacatgcagactctggatctggactacatcagcaccatcatacacaac
tgtttccacacctatgagattggtgacatttcgctggctgacaatgccaccttgtgtctg
tctgcggtgatcatccagctggcagcggtcagagctggagaacagatctacaaggacatt
atacaacacaccatcctggatgctgtacacaaggggctccgcagcaaaacaaggagtgtg
cagcatgaatacaccactgtgctagcctgcctggtgaagacctttccctccaaaaaagag
ttcatagagctggtgcagctcacagactacaatgatcctgagtctgacttctttgagcac
atgaagcacatccagatccaccgtcggggacgtgcgctgaggaagttggccaagcagctg
actgagggcacagtggtgatgacatctcgttccctacagaattatataatgccgtatgcc
atgactgccttgctggatgaaaagatgctcaagcatgagaatatgacatcagcgtcggtg
gaggtggtgggcgcagtgtgtcgcaggctgacctggtccaagtacctgtactaccttaaa
catttcatccacatcctgcagactgcacaggctgagcagaaactggctgtcagtttgcta
gtcacagtcctggaggctttccattttgaccaccagaccctcagcagagaaatggaggca
gctaacaccagagaagaaatggaaaacgatggtgtcttagagaaagaggccaccactcaa
gccaagggaccaatagctcctaaacctactgcagtggccagcgggctgccacagagcaaa
gaggagctggagtctctgatcagcaccatccaccagactgttaatgacagcgtgctgccc
cgcctgcacaagtgtctcactgcaaaggtgaaacgtgacgaggagcacaaggcggcgaag
tcaaaggatgttaaggatgaggaggtggtgaggataccgatagccttcgcaatggttaaa
ttgatgcagactctgcctccacacatcatggaggccaatctgcccgggatcctgatcaag
gtgtgtgtcctgctgaggaaccgtttccaggagatacgtgatgtggcaagaggaacactg
gtgaaaatcattgagacgctgggctgcagatacctgcagtacctgctcaaagagatgcag
ggcatcctggtcaaaggttaccaggttcatgtgctaacatttacagtgtaccagttgctg
tctgccctcagtccaaccctaaagagtggtgacctggacccatgcatgaacatgctcatc
gatgtcttcaacaacgagctgtttggggctgtggctgaggagaaggaagtgaaggggatt
gtctccaagctgatggaggctcgacacagcaagagtatggattcctgcgagctgctaggc
cagttctgcagcagggagagcatcaccaagctcatattgccactaaaggcgatactggag
acttcatcctgtttgaaggtgtgtaaccgggtgggtgctgtgctgcggcgactggtcctg
ggtctgcttgtcaacaggggcatgactcctcaggatatcttactgctgagccatggcctg
gtcagccagagtctgccactgctaaccaagagagaccgagagaaagccttggcacaggtt
cctcctgaccccagagtgccccctcccaactgcctgctcctgcatccgatcccaaagaga
gggggccagaaagctcctgtcagcagccgaaccaacatgcacatcctggtggatactggc
ctaaagctgctccacctgagtctgaagaaatccagagtgacgtcatctgaggcctcagct
ttagagatgctggaccctttcgtacagctgctgctcaactgcctacactccatgcatgta
aaggtgatcacagaggctctggtggcattcacctggcttttgaagttccctctaccagca
gtagagcagaacgcagaccagctgaccaagcaactctttgtcctgctgaaggattactcc
aaggctggagctgctcgtggggagaactaccacctggtccagaactgcttcaaggctatc
accatagtagtgaagaatgtcaaaagcaacaagatctctgagacgcaactgcaggtgctg
ttgggatacgctgaggaggatctctacgatcagtctcgccaggccactgccttcggcctt
ctgaaggcaattctgtccaggaagctcgtagttccagagatggaggaagtgatgaaaaaa
attgccaagctgtctgtcaacggcagcaatgctatgatcagaatccactgtcgacagatc
tatctgaagtacctgctagactacccactggggaggaaactgagagggcacctggacttt
gtggtggcccagctgcactatgagcatgacacagggagggagtccgtgctggagatgctg
gcattcatcttccagactttccctaagaacctgctgttaaagcacagtggcctgttcttt
gcccccctggccctggtcgtggtcaatgatgactccgcacgctgtaaaaaaatggccgcc
atggccatcaaggccctgctgacccagttggacttgaaccaccagaacaccttgttctcc
ctcgtcaacacctggctgaatgcagaaaaggccagcctgcggcgtcttggggctcagatt
tgtggtttgttcgtggaggtggaggaggagaagtttgcccgtcgactggacgacctgctg
cctgtgctggagagagcgatcaaccctgacaactatgaagatattgaagaggagcaggat
gagaagggagcagataggctgttgttcagttatctgactcttatcaccaaactcagcaag
cactgcggcctgctggagctcagcaagcctcacgacacactctgtcatatctggggtcac
attgaagcccatctgcggtaccctcattgctgggtgtggctgactgcctcacagctcttt
ggccagctgtttgcagcccagcgggcagaacaactggtcaccatttggagaggagagggt
ggagatgcttcatccaagtcagcagccacagccttcatcaccagcaacctggacaagaag
atgagagagttggcgttatcattctgccatcagttacagtcaaagttcttggacacagca
tcaggagagcaggtgatcaagaacctgctgttcatcggcaagatgatctacctcatatcc
tctgactctgacataacttcccctcaggaagaagtgaaagaagaggatgagcagagggag
aatggagttgaagaggagggagaaagaggggaggagaacgaaaaggaagagggggaagac
gaggaagaagaggatgaagattacaaggataatcgacctccttctctgctgtggttgatg
aagaagctgtctctgatggccacgagagaggcagcgcacactcccaaagttccccttaag
agaacgtgtgtgtttaagttcctgggagcaatagccatggacatgggggaggaacaactt
ggcccctatctgaccattatcatcactcctctgtacagagagctagacagcacgtatgca
gaccaagatcccacactgaagaacctggcacaggagctgattgagctgctgaggagacaa
gtggggctggagagattttcactggccttttctgctgtccagaaggagttttcagagagg
cgagcagcacgtaaaagacacagagccatgcaggcggtagctaacccagacatcgctgcc
aagaagaaactcaagaagcacaagaacaaaatcgaagcaaagaagaggaagattgagttc
ctacggcccggatataaagctaagaagcatcggagccatgcccttaaagacctggccatg
gtgcagtaa
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integrated database retrieval system
