Xiphias gladius (swordfish): 120800876
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Entry
120800876 CDS
T07311
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120800876 (tmc5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120800876 (tmc5)
03037 Cilium and associated proteins [BR:
xgl03037
]
120800876 (tmc5)
Transporters [BR:
xgl02000
]
Other transporters
Pores ion channels [TC:
1
]
120800876 (tmc5)
Cilium and associated proteins [BR:
xgl03037
]
Other cilia and associated proteins
Stereociliary proteins
120800876 (tmc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120800876
NCBI-ProteinID:
XP_040003246
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All DBs
Position
LG15
Genome browser
AA seq
998 aa
AA seq
DB search
MTSYSNGGFFNAAYHDSETLEIDRSVASKASSKTHHTNPYAREDPSWRGDREGTHNASTG
RTGVEDSFTRVPWGGLQEGSWRGRESIPMGLVSTRPGSPSWQHNLNCSTFQIDPDSRYDP
SPSVRLPAQMSGNMTMRWRGITMRRMSMFPNTDPAHLAFTEDAIRNEMENEEQNLVKELV
ALSTRERIRAIRDLPMSFEEKKHIRSQVLAFKSSKQSRQFTCFADCSENVSLFFRRCGYN
VRSDRQSLEMWQGIMKEIGGKFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPLLVYDP
LPNIPPNVSFRGLEILTGAGYFHYTVMYYGGYSNETLVGLVEYNMQLAYFFTIAVYMVLC
GIALIFSMASSFKTNYVLAEPASNGAWQLLCSWDFSVTNERAVRQRKNNLRVQLKESLSE
KAQRELLTLSEKLKHFGVYLGSWLLSTGLAVGCGASIYYLCQYEQQRATDAANWSLLQEA
ETLLVPFVVSLMNLVVPLFYSLFNKFEHYSSQRRQIYALVVRNVLLKMSILAVLCFYWMN
VVAKKFSCWESMVGQALYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPQLGVPEFDIARN
VLELIYAQTLAWIGIYFSPLLPAIQIVKFFILFYLKKVSLTQNCQPPRRTGRAAQMQTIF
IALLFFPFFVGALSMVAYTAWRLTPSEQCGPFRGLNNTFSVVGVWIDVVEEIPGSQWVAW
IYQNVIRSEIFYFLITLIILVIIYIFWQVTQGRKELIGLLRQQIVNEGKDKSFLLDKLQN
LQKTQPNKKPKQKNQKKHTKRRSDALSSGGQSNSNAMVQALLACQRLEEEEERRTAGGVS
VPSDISTSSALLQAMLARQRVDDQDEDLYQMPDEHPSSSSALTQALQARQRDEGRERDGY
YDTAGFSQNPVNRSSAVMQAMQARQRAEEDGADDSDDPPPSVSSVMMQVMQARQRAKEED
RIQLAPAPPQNPAPSGSSALIQAMLARQQAQNEYDDGY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaatggaggatttttcaatgctgcttaccatgacagcgagactctg
gaaattgatagaagcgtggcttctaaggcttcgagcaaaacccaccacactaacccctat
gccagggaagacccgagctggcggggtgacagggaggggacacataacgcttccacaggt
cggaccggcgtcgaggattctttcacgagagtgccttgggggggcttgcaggaggggagc
tggagggggagagaaagcatccccatgggcctcgtttcaacgcgccccgggagcccttcg
tggcagcataacctcaattgcagtacatttcaaatcgaccctgactctcgatatgatcca
tcaccgtctgttcgacttcctgctcaaatgtcaggtaacatgacaatgcgatggagggga
atcacaatgagaaggatgagcatgtttcctaacactgatcctgcccatctagccttcaca
gaggatgccatcaggaatgagatggagaatgaggaacagaacctggtcaaggaacttgtt
gccctgtcaacacgagaacgaatccgggctattcgggaccttccaatgagctttgaagaa
aagaaacatatcaggagccaagtactggcattcaagtcctccaagcaatctcggcagttc
acatgttttgcagattgctctgagaatgtgtcactgtttttccgcaggtgcggctacaat
gtaaggtcagacaggcagagcctggaaatgtggcaaggcatcatgaaagagattggtgga
aagtttggcaccagtgtcctctcctatttcgtgttcctcaagtggttgctcatgttcaac
attttctccttcctggtcaactttggttttatcaccatcccactgcttgtttatgacccc
ttacccaacatacctccaaatgtgagcttcagaggactggagatactgactggagctggt
tacttccactatactgtcatgtactatggtggctacagcaatgaaacacttgtgggtcta
gtggagtacaacatgcagctggcctatttcttcaccattgcagtctatatggtgctgtgt
ggaattgcacttattttcagcatggcaagctcatttaagacaaactatgtactagcggaa
ccagcttcaaacggtgcatggcagctcctgtgcagctgggattttagtgtaaccaacgag
agagcagtgagacagcgcaagaacaacctccgtgtccaactcaaggagtctttgtcagaa
aaggcccagagggaactgttaaccctctctgaaaaactgaagcattttggggtttatctg
ggttcctggctcctctccactggcttagctgttggctgtggagccagcatctactacctc
tgccaatatgaacagcagcgagcaactgatgctgccaactggtctctgcttcaggaggca
gagactctcctggttccctttgtggtgtctctgatgaacctggttgtcccgctcttctac
tccctcttcaataagtttgagcactactccagccagcggagacagatctacgctcttgtt
gtccgaaatgtcttactcaagatgtccattctggctgtcttgtgtttttactggatgaat
gtggtagctaagaagttttcgtgttgggagtccatggtaggacaggctttgtaccgtctg
gtcattgttgacttcctttttctgatgttgggctccttctttggagagtttcttagcaat
gtaattggaaccagattactaccacaactgggggttccagagtttgatattgccagaaat
gtcctcgaactcatctatgcacagactctagcctggataggaatctacttctctcctctg
ctgcctgccatccagattgtcaaatttttcatcttgttttacctaaagaaggtcagcctg
acccagaattgccagcctccgcggagaacaggcagggcagctcagatgcaaacaatcttc
atcgccctcctcttcttccctttcttcgtgggagccttgtccatggttgcatacactgcc
tggagactgactccctcggagcagtgtggtccttttcggggactcaataataccttcagt
gtggttggagtctggatagatgttgtggaagagatccctggttctcagtgggttgcctgg
atctaccaaaacgtcatcaggagtgaaatcttctattttcttatcacactcatcatcctg
gtcatcatatacatcttctggcaagtcacacagggccgcaaggagcttattggtctactg
agacaacagattgttaatgaggggaaagacaagtccttcttgttggacaaactccagaac
ctccagaaaactcagcctaataaaaaacccaaacagaagaatcaaaaaaagcacaccaaa
cggcggtcagatgccctctcttcaggtggtcagtccaactcaaacgccatggttcaggct
ttacttgcttgccagcgacttgaggaggaagaagaaagacggaccgcgggtggagtgtcc
gttccctctgacatctccacctccagcgctctgctgcaggcaatgttggcccgtcagaga
gtcgacgaccaggatgaagatttgtaccagatgcctgatgaacacccgtcatcctccagc
gccctcacacaggccttgcaagccaggcagagggacgaaggtcgagagagggatggatat
tacgacacagcaggtttttctcaaaaccctgtgaacagatccagcgctgtcatgcaagcg
atgcaagccagacagagagcagaggaagacggagcagatgattcggatgacccgcccccc
tctgtgtcaagtgttatgatgcaagtcatgcaagccaggcagagagcaaaggaagaggac
aggattcagttggcccctgctcccccacaaaacccagctccctcaggctccagtgctctc
attcaggccatgttggccaggcagcaggcccagaacgagtacgatgatggttactga
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