Xiphias gladius (swordfish): 120800900
Help
Entry
120800900 CDS
T07311
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04517
IgSF CAM signaling
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120800900
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120800900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120800900
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120800900
Intermediate filaments
Intermediate filament-binding proteins
120800900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SCAR_helical
PMC2NT
Motif
Other DBs
NCBI-GeneID:
120800900
NCBI-ProteinID:
XP_040003298
LinkDB
All DBs
Position
LG15
Genome browser
AA seq
2351 aa
AA seq
DB search
MMTTVAAEYDHMELQQQYSSSNDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVD
KALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKD
ALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNA
FNLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNA
IETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQ
EKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEER
VQAVVAVAKELEVERYHDIKRITARKDNVIRLWEYLLELLKARRLRLEMNLGLQRVFQEM
LYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQVDRVKAVTTNANKYSVN
DSGYKPCDPQIIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREK
EQILSSLEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVDAGHFGATKIQE
RITDLQAQWAALEQLAVVRKKRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEF
STQALVRKHKDAAAEVASYRPVIDSLHEQATALTKEEAESEEVRGRLAGIEERYKEVAEL
TKLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPE
MNNQASRVAVVNQIARQLIHSGHPSEKDIKSQQDKLNNRWSQFRDLVDQKKESLNSALGV
QNYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRS
EAQRLAEEHPDQAKAITGRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSW
LSRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQY
MFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEM
PTTLEGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINAERIQERVASIDDRH
KKNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQ
AFMAELQSNKEWLDKIQKDGMLLVSEKPETEVVVKEKLSALHTMWEELESTTQTKAQCLF
DANKAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVV
ELQSQVKALGQEVKDTDEVDGRRQLVERKFQDLLEPLRRRRNFLVASREVHQFNRDVEDE
ILWVQERMPVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSQSLLQDESS
NADVIRQRLADLRELWRQLMDEAERRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSE
EKAKDEQSAVAMLKKHQIVEQAVEDYAETVHQLSKTSRGLVGDGHPESERISMRQSQVDK
LYAGLKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQE
RFREFARDTGNIGQERVDAVNRLADELINAGHSDAATVAEWKDGLNEAWADLLELIDTRT
QILAASFELHKFYHDAKEILGRILDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGT
QVRQLQEDAVRLQSAYAGDKADDIQRRETEVLEAWRILLEACDGRRVRLLDTGDKFRFFS
MVRDLLLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKALL
ARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEP
YLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRR
KPPSPEPAVVQQEESQQQSGAITQNGLPSDQDSARDVVDAGDLVNGVAERSSKEPSPTAS
PTSGRKSKTSQSSTLPSKNQDSSSSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQE
MGFYKDSKAAGQGVPYHNELPIGLKEATCDVASDYKKKKHVFKLRVTDGNEYLFQTKDEE
EMSTWIQAILNASTGDRSDVQGSNPGTPVSVRAQTLPAAITLTTESSPGKREKDKEKDKE
KRFSLFSKKKQ
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgagtacgaccacatggagctgcagcagcagtacagcagc
agcaacgacacggtcaacaaccgctgggacgacgaatgggacaacgagaacagctcggcc
cgcctcttcgagcgctcccgcatcaaggcgctcgcagatgagcgtgaggcggtccagaag
aagaccttcaccaagtgggtgaactctcacctgtccagagtctcctgcaggatcacagac
ctctacatggacctgagagacggacgcatgctcatcaagctgctggaggtcctgtcagga
gagagactgccgaaacccaccaaaggccggatgcgtatccactgtctggagaatgtggac
aaagctctgcagttcctgaaggagcagcgggttcacctggagaacatgggatctcacgac
attgtggacggaaaccaccgactgacgctgggcctcatctggaccatcatcctccgcttc
cagatccaggacatcagtgtggagactgaagacaacaaagagaagagatcagccaaagac
gctctgctgctctggtgtcagatgaagacggcagggtatcccaacgtgaacatccacaac
ttcaccacaagctggagagatggcatggccttcaatgctctcatccacaaacacaggccc
gatctgatcgactttgacaaactgaaaaagtccaatgctcactacaacctgcagaatgct
tttaacctggcagagcaacacctgggcctcaccaagctgctggacccagaggatatcagc
gtggaccatcctgatgagaagtcagtcatcacttacgtggtgacgtactaccattacttc
tccaagatgaaggctctgaaggtggagggcaaacgcatcggaaaggtgttggacaacgcc
attgagacggagaagatgattgagaaatatgagtctctggcgtccgacctgctggagtgg
attgaacagaccatcatcatcctcaacaacaggaagtttgccaactctctggtcggagtc
cagcagcagcttcaggccttcaacacctaccgaactgtggagaaacctccaaagttcaca
gagaagggaaacctggaggttcttctcttcaccatccagagtaagatgagagccaacaac
cagaaggtctacatgccccgagagggaaaactcatctcagatatcaacaaggcctgggag
cgtctggagaaggcggagcatgagagggagctggcactgaggacggagctgattcgacag
gagaaactggaacagctggctagacgctttgaccgcaaggcggccatgagagagacctgg
ctcagcgaaaaccagagactggtgtcacaggacaactttggtttcgaccttcaggctgtt
gaggcggccaccaagaaacacgaggcaattgagacggacatcgcggcatacgaggagcgt
gtccaggctgtggttgctgttgcaaaggagctggaggtggagcgctaccacgacatcaaa
cgcatcacggccaggaaggacaatgtaatccggctgtgggagtacctgctggagctgctg
aaggcccgcagacttaggctggagatgaacctgggcctgcagagagtcttccaggagatg
ctgtatatcatggattggatggacgagatgaagatgctgctgctgtctcaagattatggg
aagcatctgttgggtgtggaggacctgctacagaaacatgccctggtggaggccgacatt
gccatccaggttgaccgggtgaaggcggtaaccactaacgccaacaagtactccgtcaat
gacagcggttacaagccctgtgaccctcaaatcatccaggaccgggtggcccatctggag
ttttgctaccaggagctgacccagctggctgctgagcgtcgcgcccgcctggaggagtcc
cgccgcctctggaagtttttctgggagatggccgaggaggagggctggatccgtgagaag
gagcagatcctgtcttctctcgagcatggcaaggacctgacgggcgcactgcgcctcctc
agccagcagcgtgccttggaggacgagatgagcggccgtgctggacacctccagcacacc
atcgctgagggccaagccatggtcgatgccggtcatttcggtgccactaagattcaggag
cgtatcactgacctgcaggctcagtgggcagcactggagcagctggcagtggtgagaaag
aagaggctggaggaggctctagccctgcaccagttccaggctgacgcagatgatgttgat
gcctggacgctagacgccctgcgcattgtctccagtggagagacaggccatgacgagttc
tccacccaggcgctggtcaggaaacacaaggacgcagcggcagaggtggccagctacagg
ccggtcattgactcactgcacgagcaggccaccgcccttaccaaagaggaggcagagtca
gaagaggtgcgcggtcggctggctggcatcgaggagcgctacaaggaggtagctgagcta
acgaagctgagaaaacaggcactgcaggacgctctggcactctataagatgttcagtgaa
gccgacgcctgtgaggtgtggatcgatgaaaaggagcagtggctgaatagcatggagatc
cctgaaaaactggaggacctggaggtcatacagcacaggtttgagagcctggagccagag
atgaacaaccaagcgtctcgtgttgctgtggtgaaccagatcgcccggcagctgatacac
agtggtcacccaagtgagaaagacatcaagagccagcaggacaaactcaacaacaggtgg
agtcagttccgcgacctggtggaccagaagaaggagtccctgaactcagctctgggtgtg
cagaactaccacctcgactgcaatgagaccaagtcctggatcaaagagaagaccaaagtc
atcgagtccacgcaggagctgggcaacgatctaaccggagttatggccctgcagcgtaaa
ctgaccggtatggagcgcgacttggctgccatcgaggacaaactgggcgacttgcgaagt
gaggcccagcggctggcagaggagcaccccgaccaggctaaggccatcacaggccgtctg
gctgagatcactgccgtctgggaggaaatgaaaaacactctgaagaaccgtgaggagtct
ctgggtgaggccaggaagctgcagcagttcctgcgtgagctggatgacttccagtcatgg
ctttcccgcactcaaacggccattgcctccgaggacatgcccaacacactggctgaggcc
gagaagctgatggctcagcacgaaggcatcaagaacgagatccagaactatgaggaagac
taccagaagatgcgggacatgggggagatggtgacacagggccagacggatgctcagtac
atgttcctgcgacagaggctgcaggcgctcgacaccggctggaacgaactgcacaagatg
tgggagaaccggcagaacctgctgtcccagtcccacgcttaccagctgttcctcagggac
acaaaacaggccgaggccttcctcaacaaccaggaatacgtcctggctcacaccgagatg
cccacaactctagagggcgccgaggctgccatcaagaagcaggaggacttcatgaccacc
atggacgccaacgaggacaagatcaacagtgtagtggaggctggcaggcgactggccagc
gacgggaacatcaacgccgaacgtatccaggagagagtcgcctccatcgatgacagacat
aagaagaacagggaggctgcagtggagctgctgatgagactgaaggacaacagagacctg
cagaagttcctgcaggactgccaggagctgtctctgtggatcaatgagaagatgctcaca
gctcaggacatgacctacgacgaggccaggaacctgcacagcaagtggctgaagcaccag
gccttcatggctgaactgcagtccaataaagagtggctggacaagatccagaaggacggc
atgttgctggtgtcggagaagccggagacagaggtggtggtgaaggagaagctgtcggcg
ctccacacgatgtgggaggagttagagtccaccacgcagaccaaggcccagtgcctgttc
gacgccaacaaggccgagctgttcactcagagctgtgctgacctcgataagtggctggtc
ggcctcgagggtcagatccagtcggacgactatggcaaggacctgacgtccgtcaacatc
ctgctcaagaaacaacagatgctggagaaccaggtggaggtgcgtcagagggaggtggtg
gagctgcagagccaggtgaaggctctgggtcaggaggtgaaggacactgatgaggtggac
gggcggaggcagctggtggagaggaagttccaggacctgctggagccgctgagacgccgc
aggaacttcctggtggcatcaagagaagttcaccagttcaaccgagacgtcgaggacgag
atcctgtgggttcaggagaggatgcctgtggccacgtccaccgaccacggacacaacctg
cagaccgtccagctgctcatcaagaagaaccagactcttcagaaggagatccagggccat
cagcctcgtatagacgacatcctggagcgcagtcagagcctcctgcaggacgagtcctcg
aacgccgacgttatccgtcagcgtctggccgacctgcgggagctgtggaggcagctgatg
gacgaggcggagcgacgacacggccggcttgaggaggcccacaaggcccagcaatactac
ttcgatgctgcagaggctgaggcctggatgagcgagcaggagctgtacatgatgtcagag
gagaaggccaaggatgagcagagtgctgtcgccatgctgaagaagcaccagattgtggag
caggcggtggaggactacgctgagaccgtccaccagctgtccaagaccagcagaggactg
gtgggtgatggacaccctgaaagtgagcgtatcagcatgcgtcagtctcaggtggataag
ctgtacgccggcctgaaggacctgtcagaagagaggcggggcaaactggacgagaggcac
cgcctcttccagctgaaccgagaggtcgacgacctcgagcagtggatcgctgagcgggag
gtggtggccgggtcacacgagctgggacaggactacgaacatgttactatgttgcaggaa
cgtttccgggagtttgcccgggacaccggcaacatcggtcaggaacgcgtggacgccgtt
aaccgtctggcggacgagctgatcaacgccgggcacagcgatgcagcgacggtggcggag
tggaaagacgggctgaacgaggcctgggctgacctgctggagctcatcgacaccaggacg
cagatccttgccgcctccttcgagctccacaagttctaccatgatgccaaggagatcctc
ggacgcatcctggacaagcagaagaagctgccggaggaggtcggccgagaccagaacaca
gtggagacgctgcagaggatgcacaccaccttcgaacatgacatccaggccctgggcaca
caggtgaggcagctccaggaggatgcggtgcgcctccagtcggcgtacgccggcgataaa
gccgacgacatccagcggagggagaccgaggtgctggaggcctggaggattctgctggag
gcctgcgacggacgccgggtccgcctcctcgacactggggacaagtttaggtttttcagc
atggtccgggacctgttgctgtggatggatgacgtgatccggctcatcgaggcccaggag
aaacccagagatgtgtcatcggtggagctgctgatgaacaaccatcagggcatcaaagca
gagatcgacgcccgaaacgacagcttcacaacctgcatcgagctgggaaaagccctgctg
gccagaaaacactacgcatccgaggagatcaaagagaagttactgcagctgacggacaag
aggaaagagatgattgacaagtgggaggatcgatgggagtggctacgactcatcctggag
gtgcaccagttctcccgggatgccggggtggcggaggcctggctgctcggccaggagccc
tacctgtccagcagggagatgggtcagagcgtggacgaggtcgagaaactcatcaaacgc
cacgaggcctttgagaagtcagcggccacctgggaggagcgcttctctgccctggagagg
ctgactacgttggagctgttggaggtgaggaggcagcaggaggaggaggagaggaggagg
aagcctccgtccccagaaccagctgtggttcagcaggaggagtctcagcagcagagtggg
gccatcactcagaacggactgccgtcagatcaggactctgctcgggacgttgtggacgct
ggagatctggtgaacggcgtggcagagcggagctccaaggagccgagcccaaccgcctcc
cccacctccggcaggaagagtaaaaccagccagtcgtccacgctgccctccaagaaccag
gactcgtcgtcctcacagctggagggactcctgcaccgcaaacatgagtgggagggccac
aacaagaaggcctccaacaggtcgtggcacaacgtgtactgtgtcatcaacaaccaggag
atgggtttctataaggacagcaaggcggcgggtcagggggtcccgtatcacaacgagtta
cccatcggcctgaaggaggcgacctgtgacgtggcctcagactacaagaagaagaaacac
gtcttcaaactcagagtgactgatggaaacgagtatctgttccaaaccaaagatgaagag
gagatgagcacctggatccaggccatcctgaacgccagcaccggagaccgctccgacgtc
cagggcagcaaccccggcacgccggtgtctgtgcgtgctcagacgctgccggcggccatc
acgctcaccaccgagtcgagtcccggcaagagagagaaggacaaagagaaggacaaggag
aaacgcttcagcctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
