Xiphias gladius (swordfish): 120800924
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Entry
120800924 CDS
T07311
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120800924 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120800924 (smg7)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120800924 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
120800924 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
120800924
NCBI-ProteinID:
XP_040003333
LinkDB
All DBs
Position
LG15:686112..712783
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AA seq
1207 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSSTSAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLSKSLDKLDGLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTSDGSEQNYSSEQQISWFQLLGLFMSFLGVMCSRVLLNKNRGEEIMGECP
LPAIKVSLDWLKLRPSVFHEAAVDKRQYVWPWLVSILNSFQPKEDDLSCSSVTPLPEEFE
LQGFLALRPALRSLDFTKGHQGILVDRDGLPVHTRHQRLISLGKWVADNQPGLIQCRVSE
EGLLVFITDIPEQAIEEPQEKEAPVLQESSNGEQTPNDSGNSGLKSVLSAGKTQSSWPDG
GDRPVVTFKENIKPREQSREPTRNHHQKDGGKERRDFTKGNGAAGKGELKRDGKRKSELK
KTGHEKATDAGKQVKAQTELRKTPVSEAKKTPVTQTQTTCSSQFIPIHHPGAFPPLPSRP
GFPTSAYVIPPPVAFTGLQVNPGFTFSTGVSVPGPFLQPAVHTQAGTQVQAGKQSHIPYS
QQRPSGPGPGQGPGSSAQGPGPMNQGPSQGQQPQAQPPSQQALQQSVQLQVQAMSQQQQQ
QSPTKPVQQVAIGKSPPHHPGLQQYMQVQDQPAQMWNQAQAALQKMTPMQMSMKQPPQQQ
QQQPQAFYMTAQDPLKLYEHQLQPPAQPQLSNMDKKIKYPDVKMQDFYWEPSYRMGDGLA
VMADRMKRPPPGGICSEQDASAGPRGPPFEDNKSSPLLPPDLLKTLADFEEEEELIFTKP
PDFFQALAGPLSTAPGPNIFLPNQTRMESGPEVVSQSSSLLPISGFPMQEYNQNSIFSQA
YGKNLPPSSKPDAPMVHQEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSS
PPTHNHGAMPFSNFGPIGTPDSRDRRVVDRWKADKTGAVSGFGLDYLPAAASSAASDTSW
HQTGPTGSSWTNQESPMEESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGH
GAMNPPH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccagtacctacgacaggcagaggccctgaaggctgacatgacagat
tcaaagctgggggctgcagaggtgtggacatctcggcaggccctgcaggacctctaccag
aaaatgctggtgactgatctggagtacgctctggacaagaaggtggagcaagacctgtgg
aatcatgcttttaagaaccagatcaccactctgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgttcctggaggcagctagtggcttc
tacacacagttactgcaggagctttgcactgtcttcaacgtggacctgccgtgtcgcgtc
aaatcgtctcagcttggtatcatcagcaataaacagagcagcaccagcgccattgtcacc
ccacagcccagctcctgctcctacatctgccagcactgcctcgtccacctcggagacata
gcgcgttaccgaaaccagaccagccaggcggagtcttactaccgacatgcagctcagctg
gttccatcaaacggtcagccatacaaccagctggctatcctggcgtcctctaaaggagac
cacctcaccacaatcttctactactgccgcagcattgcagtcaagttccccttcccagca
gcctccaccaacctgcagaaggccctgtccaaggctctggagagtcgtgacgaagtgaaa
accaagtggagcgtgtcagatttcatcaaggccttcatcaaatttcacggtcatgtctac
ctgagtaagagtctggacaaactggacggtctgagggagaaactggaggagcagtttcag
aggctgatcctgcagaaagccttcagttctcagcagctggtccacatcacagtcatcaac
ctgtttgagctccaccaccttagagacctgacgtcggacggcagcgagcagaactacagc
agcgagcagcagatcagctggttccagctgctcggactcttcatgtccttcctcggagtc
atgtgcagccgtgttctgctcaacaagaacaggggggaggagatcatgggggagtgtcct
ctgccggccatcaaagtttctctggactggcttaaactgagacccagcgtcttccatgag
gccgctgtcgacaagaggcagtatgtttggccctggctggtctccatcctcaacagtttc
cagcccaaagaagacgatctgtcctgttcctcagtcacgcccctgcctgaggagtttgag
ctccagggtttcttggcactccgccccgctctgaggtcactggacttcacaaaaggtcat
cagggcatcctggtggacagagacggcctgccggtccacactcgacaccagagactcatc
agtctgggcaaatgggtggccgacaaccagccagggctgattcagtgcagagtgagtgag
gaaggcctcctcgtcttcatcactgacattccagagcaggccatcgaggagccacaggag
aaagaggcaccggtgctgcaggagtcctcgaacggtgaacagacacccaatgacagcgga
aactctggcctgaagtcggtgctgtctgcggggaagacgcagagctcttggccggacgga
ggcgatcgacctgttgtcaccttcaaggagaacatcaaaccccgagagcagagccgcgag
ccaacacgaaaccaccatcagaaggacggtggcaaagagcgcagagacttcacaaaaggc
aatggggctgctggaaaaggagagctgaagagggatgggaagaggaagagtgagctgaag
aaaaccggtcatgagaaagctactgatgctggaaaacaggtgaaggctcagacagagctg
aggaagactccagtgtctgaggcgaagaagactcccgtaactcaaacccaaaccacctgc
tcctcccagttcatccccatccatcatcctggagccttcccaccactgcccagcagacct
ggtttcccgacctcagcctatgtgatccctcctccggtggctttcacagggctccaggtg
aatccaggcttcaccttctccaccggagtgtccgtccctggacctttcctccagccggct
gtccacacccaggctggcacgcaggtccaggccggaaagcagtcccacattccctatagt
cagcaaaggccctcgggtccagggccaggtcaggggccggggtcctcagcgcagggcccg
gggccaatgaaccagggcccctcccagggtcagcagccccaggcccagccaccttcccag
caggctttgcagcagtcggtccagctgcaggtgcaggcgatgagccagcagcagcagcag
cagtctcccaccaaaccggtccagcaggtcgcaatagggaagagtccacctcaccacccg
ggactgcagcagtatatgcaggtccaggaccagccagctcagatgtggaaccaggcacag
gcagccctgcagaagatgactcccatgcagatgtcaatgaaacagccgccgcagcagcag
cagcagcagccgcaggccttctacatgacggctcaggatcctctcaaactgtatgagcac
cagctgcagccgcccgcccagccacagctgtccaacatggacaagaagatcaagtaccct
gacgtcaagatgcaggacttctactgggagccatcctacaggatgggggacggtctggct
gtgatggcggacaggatgaagaggcccccaccgggtggtatctgttcggagcaggacgcc
tccgccgggccccgggggcccccgtttgaggacaacaagagctcgcctcttctacctcct
gacctgttaaaaactctagcagattttgaggaggaggaggagctcatctttactaagcct
cctgatttcttccaggccctggctggccctcttagcactgctcctggaccaaacatattt
ctgcccaatcagaccaggatggagagcggccccgaagtcgtcagccaatcatcctctctc
ctgcccatttctggcttccccatgcaggagtacaaccagaacagcatcttcagtcaggcc
tacggcaagaacctgccacccagctccaagcccgacgctcccatggtgcaccaggagccg
tccctctactccctttttgaagggactccctggtccccctccctccctgccagctcagac
cactccaccccggccagccagtcccctcactcctccaaccccagcagcctgccgtcctct
ccccccacacacaaccacggagccatgcccttctctaactttgggcccatcggcactccg
gacagccgggaccgcagggtagtggaccgctggaaggctgacaagaccggggcggtgagc
gggttcggtctggactacctgccggctgcggcctcctctgcggcttcagacaccagctgg
caccagaccggaccgaccggcagttcctggaccaatcaggagtctcctatggaggagtcg
tcctccactgtgctgctcgacagccttaagtcgatctggtcgagctccatgatgcagccg
ggcccgtcagcgctggagcagctcctcctgcagcagaaacagaagcagcagcgaggtcac
ggcgccatgaacccgcctcactga
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integrated database retrieval system
