Xiphias gladius (swordfish): 120800932
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Entry
120800932 CDS
T07311
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120800932 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120800932 (taf5)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120800932 (taf5)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120800932 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
120800932 (taf5)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120800932 (taf5)
STAGA complex
120800932 (taf5)
TFTC complex
120800932 (taf5)
SAGA complex
120800932 (taf5)
SLIK complex
120800932 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
WD_LRWD1
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_VPS8
LisH_TPL
PROPPIN
Beta-prop_ELP1_1st
CDK5RAP3
VPS8_N
RAB3GAP2_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
120800932
NCBI-ProteinID:
XP_040003348
LinkDB
All DBs
Position
LG15:25051037..25056187
Genome browser
AA seq
750 aa
AA seq
DB search
MAAVQGGLVDADEEKDIKSEPSNDGWGNNNANDGRLLSTSPGSSAPAGGTKTAAGAPEDQ
QTLLAVLQFLRKNKLNESVEILRREAGLPEDSLDPKGADSSGAGSGGAAGNVDIDGGDGS
SLLSRVTVSSSAGAQAPTKAAVGEDQPDVNVVLSAYSQQGDPTLYEVYYSGLKRFIEAVL
DCHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRVLSGLTKKE
HMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGIPRSK
SQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDS
MGSKSKKQDPNAPSQNRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYSFLNA
YQGLTAVDFTDDSSQIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD
EKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW
DTQFSPHGYYFISGGHDRVARLWATDHYQPLRMFSGHLADVTCTRFHPNSNYVATGSSDR
TIRVWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMVAELKG
HTDTIYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELL
LGTYMSKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtctcgtcgatgcggatgaagagaaagacattaaatcagaa
ccatctaacgatggctggggaaataataatgcaaacgacgggagactgctctctacgtcg
ccgggctccagtgctccggctggaggcaccaaaactgcggcgggagccccggaggaccag
caaacgctgctggcagtcttgcagttcctcagaaagaacaaactgaacgagtccgtcgaa
attttgcgtcgcgaagcgggattaccggaggattcacttgatccgaagggggctgattcc
tccggggccggctcggggggtgctgcgggcaatgtggacatagatggcggggatggcagc
tctcttctcagccgggtgaccgtctcatcatctgccggagcccaggcaccaacaaaagca
gcagttggggaggatcagccagatgtcaatgtggtgctgtcagcttacagccagcaggga
gacccgactctgtatgaagtttactatagcggcctcaagagatttatagaagcagttttg
gactgtcacagagcagaactgtcccaggtcttctacccactgtttgtccacatgtatctg
gagttggtgtacaacaatcatgaaagtgaggccaaggctttctttgaaaagtttagtggg
gaccaagagtgctattatgaagacgacttgcgtgttttgtctggcctgacaaagaaggag
cacatgagaggtaacgagaccctcctcgacttccgcaccagcaagtttgtcctgcgcatc
tctcgtgattcttaccagctgctgaagagacacctgcaggagcgtcagaacaaccagatc
tggaatattatccaagagcacctctacattgacatctttgatggcattccacgcagcaag
agccagatcgatgccatgtctggcagcttggctggagaggccaagcgagaggccaataag
gctaaggtttactatggattgctgaaggaaccggaaattgagctgcctctagacgatgag
gatgaggaggcagagaatgaggagggtaaacccaagaagaagaaacccaaaaaggacagc
atgggctccaagagcaagaagcaggatcctaatgcaccttcacagaataggatacctttg
ccagaactaaaggattcagacaagctggacaagatcatgtacatgaaggaggccacaaag
agaatccgcctgggaccagataacctcccctctatctgtttctactcttttctaaacgca
taccagggtttgacggcagtggacttcacagatgactccagccagattgcaggaggcttt
gctgactccacagtacgggtttggagtgtcacaccgaaaaagctccgcaaggtcaagtca
gcagcagacttgaatctaattgacaaagagtcagatgatgtgctggagaggatcatggac
gagaagacggccagtgagtcaaagatcctctacggacacagtggccccgtgtatgggatc
agcttcagcccggacagaaactacctgttgtcaagttctgaagatggtacagtcaggctg
tggagtctccaaacatttacttgtctagtgggctacaaaggccacaattacccagtatgg
gacacccagttttctccccacgggtactattttatctccgggggacatgacagagttgcc
cgtctgtgggcgacggatcactaccagcctctacggatgttttctggtcatctagctgac
gtcacttgcacccgtttccaccccaactccaattatgtggccacagggtcatctgaccgc
accatccgcgtctgggacgtcctgaacggaaactgtgtccgtatattcaccggccataag
ggtcctatccatgcgctggctttctctcccaatggtaagtttttggcttctggagccact
gacggcagagttcttctgtgggacattggtcatggactgatggttgcagagctgaaaggc
cacacagataccatctattccctcaggttcagcagggatggcgagatccttgcctctggc
tccatggacaacacagttcgtctgtgggacgcaatgaaagctttcgatgatttagagact
gacgacttcacagcagccacaggacacattcatctacaagataactcacaggagcttctg
ctgggcacctacatgagtaaatccacacctgtcatacaccttcacttcacccggaggaac
ctgctgctggctgctggggcctacaatccataa
DBGET
integrated database retrieval system
