Xiphias gladius (swordfish): 120800975
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Entry
120800975 CDS
T07311
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120800975
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120800975
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120800975
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120800975
NCBI-ProteinID:
XP_040003437
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All DBs
Position
LG15:25787633..25796757
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AA seq
647 aa
AA seq
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MRGGSFYGDRDRGRDRPRFGATSGRSGPAPMKFGNPGERLRKKRWNLDELPKFEKNFYAE
HPEVQRISQYEMDECRGKKEITIRGSGCPKAISAFHHAQFPQYVMDVLMQQNFKEPTAIQ
SQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLILAPTRELAQ
QVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQIN
IGALELSANHNILQIVDVCMETEKDHKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRRM
RRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPSS
SEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDSGRGG
GGGGRMRYRGSTSNNPNLMYQDECDRRMRSGGGGGGSKDSRSGFSRDNRSNRDGDRSSSS
SSYRGRSRDHRNSYNSGSDQYQSYSGGGGYNSRSGVQSGGGGGQDQSTQPQGQFGHPPPL
PPSGGPQPLMAQQFVPPQPPLMGFMGQPPYPFASPPPPPPGPAPPRK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagaggggggtcgttctatggagacagggaccgtggacgagacaggccacggtttggg
gccacgagtggccgcagcggacccgccccgatgaagtttgggaatccaggtgagcgtctc
cgaaagaagaggtggaacctggacgagctgccaaaatttgagaagaatttctatgctgaa
caccctgaggtccaacgcatcagtcagtatgaaatggacgagtgtcgcgggaagaaggag
atcaccatcagaggctctggctgtccaaaagcgatcagcgcttttcaccacgcgcagttt
cctcaatatgtgatggatgtgctgatgcagcagaactttaaggaacccacagccattcag
tctcagggcttccctgtggccctgagcggcagggacatggtggggattgcacagactggc
tctggaaagacactggcttatcttcttcctgctattgtgcacatcaaccatcagccctat
ctggagaggggagatggtccgatttgtctgatactggccccaaccagagagttggctcag
caggttcaacaggttgcatatgactatggcaagtcttcccgtatcaaaagcacctgtgtc
tacggtggagcacccaaaggaccacagattcgcgatcttgagaggggtgtcgagatctgc
atcgccacacctggtcgtcttattgacttcttggaggtggggaagacaaacctgcgtcgc
tgcacctacctagtactggatgaggctgaccgcatgctggacatgggctttgagccacaa
attcgcaagatagttgagcaaattaggcccgacagacagacgctgatgtggagtgcaacc
tggccaaaggaggttcggcagcttgctgaggacttcctgcgggactatgtccagatcaat
attggcgctctggaactcagtgccaaccacaacatcctgcaaatagtcgatgtctgcatg
gagaccgaaaaggaccacaaacttattcagctgatggaggaaattatggctgaaaaggaa
aacaaaaccatcatctttgtggagaccaagaagcgttgtgatgatcttaccaggagaatg
aggcgggacgggtggccagccatgtgtatccatggagacaagagccagccagaaagagac
tgggtactcacagagtttcggagtggcaaagctcctatactgattgctactgatgttgcc
tctcgtggtcttgacgtggaagacgtcaagttcgtcatcaactatgactatcccagctcc
tctgaggattatgtccaccgtattggacgtacggcccgcagtaccaacaaaggcactgcc
tacaccttcttcaccccagggaacctgcggcaggcccgagaccttgtccgggtgttggag
gaggcccggcaggccatcaacccaaaactccttcagcttgtggactctggccgcggtgga
ggcggaggtggcagaatgcgttaccgtggcagcacctccaacaaccctaacttaatgtac
caggacgagtgtgatcgccgcatgcgctctggtgggggcggtggcggcagcaaagacagc
cgtagtggcttcagccgtgacaaccgcagcaaccgcgatggagaccgctcctcctcctct
tcctcctacaggggcagaagtcgggatcacaggaacagctacaactcgggctcagatcag
taccagagttacagcggcggcgggggctacaactcccgcagcggcgtccagtctggtggc
ggtggaggtcaggatcagtctacccagccgcagggtcagtttggccatccgccccctctt
ccaccatcaggcgggccgcagcccctcatggcccagcagtttgttccaccacagcccccg
ctaatgggctttatgggacaaccgccatacccttttgcttctccgccccctcctccacca
ggccctgcacctccccgcaagtag
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