Xiphias gladius (swordfish): 120801058
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Entry
120801058 CDS
T07311
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120801058 (caprin2)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120801058 (caprin2)
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
DUF5945
Motif
Other DBs
NCBI-GeneID:
120801058
NCBI-ProteinID:
XP_040003501
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Position
LG2:18388839..18412349
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AA seq
920 aa
AA seq
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MVQLSPSPTLDVTPPLEHSEEGSERNEDPVTAGSPNLGSPGGLNALQISLEVSTAYHGYE
TYIEDGLICLKHKVRNLEKKKLKLEDYKKRLNRGVALNKDQMAAVEKYEEVLHNLEFARE
LHKTLDGLTQTLLRAQKKAVKKEQVVKVEVERRRLSMVLQVQHLLHSLQLEHVRRDLLAG
HNQAPHIPAQQLHSLSQLATLLGVKRDNRLSLAEQMEQAALVYLDLLEGKDKPVAGSTFK
LLKEDLTRLLNCKYFSCLPPPPNNTPEMLLNSTSHSTVSKSKPNEVSKEFFNRLYLTDME
TPPTQNWKEDFQAMREQEPPDCWDMELPDGPPSPHTAVHKPWRGAATFIPKVPVTTKKQS
ADCKQRKERKAKGEQNAKLAVHMDMPVEVFNSPSALPKDPILRKQHLEDLMTKIHGSFSF
MQDSLIDGESSPKDGHPGLKRGPSGSPTPLAQTDLRSPVDVLPKAMHSTPLPTRLMERKA
SLTSGDQCLETCDLELSKDLPHEPLQLAERQAFPSPPLYRRESTISVSLEEKSRPRTPVT
ESGEQSPCNGVGSCTSTPPQGQTFSTTPTRRTLTSAQFKNIQSVFKVNTSLPQNGELNYK
PDPAVFSEPRYSTASTQTPPEFAPSEDEPQPVYQSDYTVGNGGQIFLSPGQSGGSMGRPG
QSYYTRGSVRGMARGSKGLAQTFRSSGWHRGGSYIPQTHLRDSGPLLYAARDSGYQHSYR
RGGGRHNSSAAWSDSSQVSSPDREGAFTIVDSGHGDSLSVSTVEVPLTPHGHHHTTLLPM
QLYPLSQPLRVAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYDTHIGRFTCPVNGTYVF
IFHILKLAISVPLYINLMRNEDVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRG
AIYGSTWKYSTFSGFLLYQD
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccttcccctaccctggatgtcacccccccgcttgagcactcagag
gagggcagtgaaagaaacgaggacccagtgactgctggtagcccaaatttgggctcgccc
ggtggactgaacgctctgcagatcagcctggaggtctccactgcctaccatggctacgaa
acctacatagaagatggcctaatttgcctcaaacacaaagtccgcaacctggagaaaaag
aagctgaaactggaagactacaagaagaggctgaaccggggcgtggcactaaacaaggat
cagatggcggctgtggaaaagtacgaggaggtgttacataacctggaatttgctcgggag
ctacacaaaaccctggatggcttgactcagactttgctgagagcccagaagaaagcagtg
aaaaaggagcaggtggtgaaggtggaggtggagaggaggcgtctgagcatggtgctccag
gtacagcatctcctccacagcctgcagctggagcatgttaggagagacctgctggctgga
cacaaccaggcgccccacatcccagcccagcagctgcacagcctgagtcagcttgccacc
ctgctgggagtcaagagggataaccgactaagtttagcagagcagatggaacaggcggct
ctggtctacttggacctgctggaagggaaagacaagccagtggctgggtccacatttaag
ttgttgaaagaagatctcaccaggctgttgaattgcaagtacttcagttgtcttccacct
ccccccaacaacactccagagatgttactgaactcaactagccacagcaccgtatcgaaa
tcgaaaccaaatgaagtttctaaggagtttttcaacagactgtacctgactgacatggag
actcctcccactcagaactggaaggaggacttccaggccatgagggagcaggagcctcct
gactgctgggatatggagctcccagatggacccccctcacctcatactgcggtccacaaa
ccatggagaggagctgcaacttttatccccaaagtcccagtcaccaccaaaaaacagtct
gctgactgcaaacagagaaaagagaggaaagcaaaaggagagcaaaatgccaagttggca
gtacacatggacatgcctgtggaggttttcaactctccgtctgccttacccaaagacccc
atcctgaggaagcagcacctggaggacctcatgacaaagatccatggctccttcagtttc
atgcaggactctcttattgatggtgagagctcccccaaagatggccaccctggactgaag
agagggccatctggatctcccactcctctggctcagacagacttgagaagcccagttgat
gtcctgcccaaagcaatgcattccaccccactgcctaccaggcttatggagcgcaaagcc
agtctaaccagtggtgatcagtgcctggagacatgtgacctggagctttcaaaagaccta
cctcatgagccacttcagttggctgaaagacaggcatttccctcaccgccgctgtaccgc
agggagtcaaccatctctgtcagcctggaggagaagagccgtcctcgtacgccggtaact
gagtcaggggagcagtctccatgtaatggggtgggatcttgcacctctacccccccacag
ggacaaactttctctacaacccccaccaggagaactctcacctctgcacagtttaagaac
atccagtcagtcttcaaggtgaatacgtccttaccccagaatggggaactgaactacaaa
ccagaccctgcagttttctctgagcccaggtacagtactgccagtacccaaacaccacct
gagtttgctccctcagaagacgaaccacagcccgtgtaccaatcagattatacggtagga
aatggtgggcagatcttcctttcccctggccagtcagggggaagcatgggtcgacccggc
cagtcgtactacaccagaggatctgtgagaggtatggcacgtggcagcaagggactggca
caaacctttcgctcttctggttggcatcgaggaggatcctacatccctcagactcatctc
agggactctggccctctcctctatgctgctagagactctggataccaacacagctataga
cgtggaggagggaggcataactccagtgcagcctggagtgattcttcccaggtgagtagc
ccagaccgagagggagccttcacaattgtggactcggggcatggcgattcgctgtcagtc
tccaccgtggaagtcccactcactccccatggccaccaccacactaccctgcttcccatg
caactctacccactctcccagcctctgcgagtcgccttcactgcctctcgcactgccaac
tttgccccaggtaatctggaccagcccatcgtgtttgatcagctgcacagcaacctgggg
gagatgtatgacacccatattggccgcttcacctgccctgtcaatggaacctatgtcttc
atcttccacatcctgaagcttgccatcagtgtgccactctacatcaacctcatgcgcaat
gaagatgtgatggtgtcggcatatgccaatgacggagccccagatcacgagacagccagc
aaccacgccatcctgcctctcttccaaggagaccaggtttggctgcggttgcatcgtggc
gctatctatggcagcacctggaagtacagcaccttctcgggcttcctgctgtaccaggac
tga
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