Xiphias gladius (swordfish): 120801167
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Entry
120801167 CDS
T07311
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04622
RIG-I-like receptor signaling pathway
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120801167 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120801167 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xgl04054
]
120801167 (ifih1)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120801167 (ifih1)
Pattern recognition receptors [BR:
xgl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
120801167 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
Helicase_C
DEAD
ResIII
CARD
SWI2_SNF2
AAA_22
C2c1_helical
C1_4
DUF3638
Motif
Other DBs
NCBI-GeneID:
120801167
NCBI-ProteinID:
XP_040003698
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All DBs
Position
LG16:complement(13761814..13772506)
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AA seq
987 aa
AA seq
DB search
MASETDETWEGLIEDFRPRLRERIVVEQVLDHIHFVAADQKEQIRQRARTEGNIAAADLL
ITAVLKKPHTPGWFRAFVDALLNSGCDYAADCMQVNLPKPEEEAENDYCVRLIRLLSPSL
VGMKTQEVCLHCFSEGLLTEEDSEIVKTEITARGPRSGARELLRCIVRGRPGWFSKFLNI
LRETEHQYLYELTGGSPDRDTPGSDEKLPSPKDERAGSEAIKEESQQAAAESPDLDASIT
EDPQDEAPDLYEGASTESEQLPNSLEPLQPDGTDPGAAVRGQENADIVLRDYQMDVAKPA
LEGKNIIICLPTGSGKTRVAVYITKKHLDRRRTEGQSGKVVVLVNKVPLVEQHYSSEFLP
FLKHTYKVERVSGDCQLKISFTEIVKKNDVIICTAQILENYLERSHEGEDEGVNLSDLTL
IIIDECHHTQKGQVYNHIMMRYLKQKHKNARLKKEQKEPVPLPQILGLTASPGVGGATKM
EKAEEHILRICANLDASKIMTSSLGEYKKEPRKTTQTVEDRKEDPFGDVIKKIMNDIHTH
AQLSPTCDLGSQNYEQWVVQKERKAATEEDQRVRVCAEHLRQYSEGLNLSNTIRMRDAFS
FLNKYHEEEIKRKTTPDEEQIIQITETERFLFSLFKENKEELQRLAENPNYENDSLSKLR
SKILQEFSSREEARGIIFTKTRRSAIALSQWIQENPKFADIGVKASYVIGGGDQSVVKPM
TSAERVDVLNKFRNGDVNLLIATTVAEEGLDIPACNFVIRYGLVTNEIAMIQAEGRGRAE
DSSYTLVEVKNSGVAEKECVNEYRKNMMNKAIDKIRALNQADYDKRIVEFQIQAIMEEKV
RMTRKKQKDMKNENPSEVKFSCRGCSKHVCTGEDIQIIENMHRVNVTSQFGKLFIQRENT
SLQERLLDYETNGFIACKDCGQRWGAMMMYRGIECPCLHVKNFVVTFSGKKIGKCTKWNE
LAVRFSAFDYAEHARQVAESSDDEETN
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgagacagatgaaacatgggagggtctcattgaggacttcaggccgaggctg
cgggagcgcattgtggtggagcaggtcctggatcatatacactttgtcgcggccgaccaa
aaggagcagatcagacaaagggcgaggaccgagggcaacatagcggctgcggacctcctc
attaccgcagtcctgaagaagccacatacccctggctggttcagggcatttgtcgacgcg
ctgttgaattcaggttgtgactatgcagcggactgtatgcaggtcaacctcccgaaacct
gaagaggaggcagagaacgattactgcgtccggcttatccgcctgctgtctcccagtctt
gtgggcatgaagactcaggaggtgtgtctgcactgtttttccgaaggcctgctgacggaa
gaggactctgaaatcgttaaaaccgaaatcaccgccagaggaccccggagtggagcccgt
gaactcctgaggtgcatcgtgagaggtcgaccggggtggttctctaaatttctcaatatc
ctgcgcgaaacggaacaccaatacctgtatgagctgactggagggtcacctgaccgtgac
acgccaggttcagatgaaaaacttccttccccgaaagatgaacgcgcaggaagtgaagct
atcaaagaggagagtcagcaggcagcagctgaaagcccggatttggacgccagcataaca
gaggatcctcaggatgaagccccagacctgtacgaaggagcgagcactgaatctgaacaa
ctgccaaacagcttggagcccttacaaccagatggaactgacccaggagcagcagtcaga
ggccaagaaaacgcggatattgttcttcgagattatcagatggatgttgctaaacctgcc
ttggaggggaaaaacatcatcatatgcctcccaacaggaagtggtaaaaccagagttgca
gtttatattaccaagaaacatctggaccgcaggaggacagaggggcagtcagggaaagtg
gttgtcctagtgaacaaggtccctcttgttgagcagcattactcctcagagttcttgcca
tttctgaagcacacatataaagtggagagagtcagtggagactgccagctcaaaatctct
ttcacagagattgtgaagaaaaatgacgtcatcatttgcacggctcagattctggaaaac
tacttggagaggtctcacgaaggagaggacgaaggggtgaacttaagtgatctgacactg
atcataatagatgagtgtcaccacactcagaaaggacaagtctacaaccacataatgatg
cgctacctgaagcagaagcacaagaacgcaagactgaagaaggagcagaaggagcctgtg
cccctccctcaaatactgggcctgactgcctcacctggggtcgggggagccacaaaaatg
gagaaagcagaggagcacattctgcgcatctgtgcgaatttggatgcttccaaaatcatg
acaagtagccttggggaatacaaaaaggaaccgaggaaaacaactcaaactgttgaagac
agaaaagaggatcccttcggtgatgtaattaagaaaatcatgaatgacattcatacccat
gcccagctaagccccacctgtgaccttggctctcagaattatgaacagtgggttgttcaa
aaagagcgaaaagctgcaacggaggaagatcagagggtgcgggtttgcgcagagcacctt
cgacagtacagcgagggcctgaatctcagcaacaccattcgcatgcgtgatgccttcagt
ttcctgaacaaataccacgaggaggagataaaaagaaaaacaaccccagacgaggagcag
atcattcaaattacagaaactgagagattcctcttcagtttgtttaaagagaacaaggaa
gagctgcagaggctcgcagagaatccaaattatgaaaatgacagcctgtcaaaactaaga
agtaaaattctgcaagagttcagcagcagggaggaggccagagggatcattttcaccaaa
actcgtcgcagtgccattgctctaagccagtggattcaagaaaaccccaagtttgctgac
attggagtgaaagcctcatatgtcattggaggaggagaccagagtgttgttaaaccaatg
acctctgcagagcgtgtggacgtgttgaacaaattccgcaatggtgatgtcaacttgttg
attgctacaactgtagcagaggaaggtttggacataccggcctgtaacttcgttatccga
tacggccttgtgaccaatgagattgctatgattcaggctgaaggtagaggaagagctgaa
gacagcagttacactctagtcgaggtgaagaattccggggtggctgaaaaggagtgcgtc
aatgagtaccgcaagaacatgatgaacaaagccattgacaaaataagagccttaaatcaa
gcagactatgacaaacggatcgtagagtttcagattcaggctataatggaggagaaggtg
agaatgacaaggaagaagcagaaagacatgaagaatgagaacccatctgaagtgaagttc
agctgccgaggctgcagcaaacatgtctgcaccggtgaagacatccagatcatcgaaaac
atgcacagggtcaatgttacatcacagtttggtaaactttttattcagagagaaaacacc
tctcttcaagagcgacttctagattatgagaccaatggcttcatagcatgcaaggactgt
gggcagagatggggtgcgatgatgatgtaccgtgggatcgagtgcccctgcctccatgtt
aaaaacttcgtggtgacattcagtggaaagaagattggcaaatgcaccaagtggaatgag
ctcgccgtcaggttttctgcctttgactacgctgaacatgcaagacaagtggcagagagc
tcagatgatgaagagaccaactga
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