Xiphias gladius (swordfish): 120801184
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Entry
120801184 CDS
T07311
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgl03016
]
120801184 (lcmt2)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
120801184 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
120801184 (lcmt2)
Transfer RNA biogenesis [BR:
xgl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120801184 (lcmt2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_6
Kelch_2
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
120801184
NCBI-ProteinID:
XP_040003735
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Position
LG16:complement(25856857..25864336)
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AA seq
679 aa
AA seq
DB search
MPTTDRKKQRQGRDAAVQGTNDSSAVSKASAAARGYFHDVFLRHFVCKAARRAPLINRGY
YVRWRAVDHCVRRFLQVTENCPKRQILSLGAGFDSLYFRLHADEALVRAVVFEVDFPDVT
RRKAALIRSNIALRGMLDSHSPAPTGPVYVCSGQYRLIGLDVREESQVVEALDAAGLDWA
APTLLLSEVVLTYMETQWSDVVIRWAAKLLPQSVFVMYEQIHPHDPFGWIMQDHFLKLNS
TLHALGRYPDTAAQRRRFLDKGWEQCVCLDMNDFYLGLVPEEERRRVEILEPFDEYEEWH
QKCSHYFILTASRGSLMAQALLTRPTVSPVPSVRLSRSPVALSVKTLPVCLEGLGMASTL
VRPGQVLLTGGSSRGGRVAVTRVLLRGQEGWRSVIVEPSVDFGVRLYHTATSGPGGGIVV
YGGRSSPLNPVRGLFRVTLDPCGPPGPLDSGDRDAVKPRVERMVCTGDPPPPRWRHTATI
VSHKGKDFLFVFGGKNESEAALGDGRFLCLDQQHWTEILVEGAAPEAHHSHSACSYQGGA
VVFGGLDRWGVPLGDTVVLKPTDRGFSWERIEVQPPPVPRYSHSAHVIGEKLVVVGGVWL
HSDGVPGVAVINLCTRSSVEFSLDTTSVPWPLMLHSFCSELTDSEEPELLLMGGGGNCFS
FGTHFNPQPVTVDLRPALG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgaccgacaggaagaagcagcggcagggcagggacgcggcggtgcagggaacc
aacgacagcagcgcggtgagcaaggcgtctgccgcagcgcggggctacttccacgacgtc
ttcctccggcacttcgtgtgcaaggcggccaggagagccccgctcatcaacaggggctac
tacgtgcgctggagagctgtggaccactgtgtgaggaggtttctacaggtcactgaaaac
tgccccaagagacagattctgtcgctgggcgcgggcttcgactccttgtattttcgcctc
cacgcagatgaagctcttgtcagggctgtcgtgtttgaggtggatttcccagatgtcacc
cggcgtaaggcagccctgatcagatctaatattgcactgagggggatgttagactcccat
tcgcctgctcccacaggacctgtatatgtgtgtagcggtcagtaccgtctgatagggttg
gatgttagagaggagtcccaggtggtggaggctctggatgcagccggcttggactgggct
gcccctactctactcctctctgaggtggtgctcacctacatggaaacacaatggtcagac
gttgtcatccgttgggcagcaaagctcctgccccagtcagtcttcgtgatgtacgagcag
atccacccccacgatccctttggttggatcatgcaagatcatttcctgaaactgaattca
actctacacgccctcggacgatacccagacacggctgcacagagacgcaggttcctggac
aagggctgggagcagtgtgtgtgtctggatatgaatgacttctacctgggcttggtccct
gaggaggagaggcgcagggtggagatcctggagccttttgatgaatatgaggagtggcac
caaaaatgttcccactacttcatcctcactgcatctcgaggctctttaatggctcaggct
ttgctcacacgtcccacagtatctccagtgccatccgtacgcctatctcggagccctgta
gccctgagcgtgaagaccctaccagtttgcctggagggcctggggatggcttccaccttg
gtgaggccgggacaggtcctgctaacaggaggctccagcagaggaggcagggtggcagta
acgagagtcctcctcagaggccaggaaggctggagatccgtcattgtggaaccatcagta
gatttcggtgtccgactctaccacaccgccacatctggtcctggaggtgggattgtggtc
tacggaggtcgctcctctcctctcaacccagttagaggccttttcagagtaaccctggac
ccctgtggtccacctggccctctagactcaggggaccgagatgcagtgaagccgcgtgta
gagcggatggtctgtacgggtgatccaccgccgccaaggtggaggcacactgctacgatc
gtcagtcataaaggcaaagactttctgtttgtgtttgggggaaagaatgaatcagaggca
gctctgggtgacggccgcttcctgtgtcttgaccagcagcactggacagagatcctagta
gagggcgcagcaccagaggcccaccactcccactcagcgtgttcatatcagggaggtgcg
gtggtgtttggaggactggacagatggggggtgccactgggggacacagtcgtgttaaag
cccaccgacagaggcttctcctgggaaagaatagaggtgcagcccccccctgttcccaga
tactctcattctgcccatgtgattggtgagaagctggtcgtggtgggtggagtttggctg
cattcagatggtgtaccaggtgttgccgtgatcaacctctgcacacggagcagcgtggag
ttcagcctggacacgacctcggtgccctggcctctgatgctgcactctttctgctctgag
ctgacggattcagaagaaccagagctactgctgatgggtgggggagggaactgtttctcc
ttcgggactcatttcaaccctcagcctgtcactgtggacctcagacctgcgctgggatga
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