Xiphias gladius (swordfish): 120801211
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Entry
120801211 CDS
T07311
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120801211 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120801211 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120801211 (ranbp2)
03110 Chaperones and folding catalysts [BR:
xgl03110
]
120801211 (ranbp2)
04121 Ubiquitin system [BR:
xgl04121
]
120801211 (ranbp2)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120801211 (ranbp2)
Chaperones and folding catalysts [BR:
xgl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120801211 (ranbp2)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120801211 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_16
TPR_14
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_8
TPR_7
ARM_TT21_C
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
120801211
NCBI-ProteinID:
XP_040003819
LinkDB
All DBs
Position
LG16:complement(9872860..9901474)
Genome browser
AA seq
3070 aa
AA seq
DB search
MRRSKAEVDRYVSSVQSSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSEYLKVQQRDP
KAHKFLGQLYEREGDINKAVGCYKRSVDLNPAQRDLVLKVAELLVSKEECDSRAEFWVEK
AAKLLPGNPAVFNLKERLLSRQGQQGWNRLFDLLQAELAARPGDAHVNVKLVQLFCQDGR
LDEAVKHCLAAEKRGMLSNSLDWYTVVVRTLQEYLAQPSVSSNEKMCRRLQRELLLAHCS
LLRITLSESSLQPSLDALRSFDQAMQTLSSVAGRHTDDLCEVFVEMRGHLYLHAATLLLK
LAQDRQQTWRVVIDLAALCYLLAYQVPRPKPKVTKRDLSAPQLLELLANDRQSQAGHMLL
NLSTDSSTLIREVVEAFGNRSGQDSLFELLFGPQASTGSSFIANDDIRSINTTAPELSQL
AKWDTGSILLHGGDLQHLSWLGLQWTLLGQKPALRDWLPQLFPRLTLETSKLDTNAPESI
CLLDLEVFIHGVVFCSHCQLQETAKISSGMNQQQQQQLYEPLCLPLPLLRLLTTDRQREW
WDAIYSLIHKRAAPSMSAKLRMIVQHGLNTLRAGEKHGLQPALAIHWAQCLSQTGDGVNS
YYDQKEYISRSVHYWKVVLPLLERIKNRRSIPEPLDPLFIHFSSKDIQIFSVKGYEEEFK
IAYAALLDIEGRTEEAIATLETINNMSSIWHLAQIYQRLSEEASSGVEETQDRCITFLRK
FRTSLSKIYNANADDIEKLPVSMEEVVDLLNDVNQQLGESGEAMDEEEEKEEGRRRGPAH
SSPAHPTETSATISHIKLSTPSPNKSMVSPSKRLISPKTPPHWVEDQKSLLQMLCQQVEA
LKNEVHDLRHNSSGNAGSPHKMYGESYGAEGLQEPFTPVQSYHGAPLTVATTGPSVYYNQ
SPAYNSQYLLRTAANVTPTKGPMYSMNRMPPQQHMYAYQQPTHTPPLQAGPTCIYPPQEQ
VFGAPLRFESPATSLLSPYSEEYYGQSVTQQTTNPPLPEPGYFTKPSVVPVPPPKSIEKP
MDFGKLSFSQQAPAEVPKVPSFGAGAVTQSTPSAAFKFNSNFKSNDGDFTFSASQAKHSE
SLLGLLTSDIPTKTDTVPEQLPTQEQPPSQTGIFTFGTKSATSFSFVDSAQSTGTGSLFG
KVDQPFKFGDVTRPVFGLSSYAAAEERAAESDNDSTHVEEDEDGPHFEPIVPLPDKVDVK
TGEEEEEEMFCNRAKLYRFDTETKEWKERGIGNVKILKHSTKGKVRLLMRREQVLKICAN
HYITADMLLRPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEASLFKAKFEEAQKIV
LKSPEKHDQQEKKEESLKDSESLAAQFALKEGEWDCTACCVRNKPTDICCVACQNANPNS
SSKPDIQAVGESKASPFTFKFGTDSSRPSSSGSTFTGFGAFGASIPSSFTFGTSTSKPAD
TPTSAFGSGFGVQFGKKPGEWDCDTCSVRNEASADSCVSCKALKASAKTSTTAQITAAAD
APVADPPTCAVDSGFGAQFSKKPGQWDCDVCEVRNEASADKCVACNSPSASAKSTEGASV
ASNLPTMSGFGADFAKKDEQWDCFACAVRNDASAAECVSCHAPNQTPSLEAMFAKKDGEW
DCDTCLVRNNASASKCVACQTPNPNAKSTTSTAPSASTFSFTFGTKGSSSQPAGTGFTMP
FGTGSTFQFGQNKDKSLATSFKFDAPQSGSGTTSASGFSFSMPIPASGFKFGIQDTAKET
PSTDNLTLQSGSASSFLKSIADKHNEKENVSTPSLDQTEQDQNPLIAGKTNTFSFADLAK
SSGAEFQFGHKDPNFKGFSGAGEQVFSSFQSTPTKTDASNELEDDDMYKTEENDDIQFEP
VVQMPEKVDLVTGEEDEQVLYSQRVKLFRFDSNTSQWKERGVGTLKFLKNNNNGRLRVLM
RREQVLKVCANHWITTTMNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKSPELAEEF
KEKFEECQRLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKFFLTDEKTKIKDDD
SQGDITTSNNVSSLVIKAHSETAGPTLEWDNYDLREEALDDTADTSVYASPIASSPLRKN
LFRFGESTGGFSFSFQPGISPSKSPAKLNQSRTSVGTDDEQDVTQDEERDGQYFEPVVPL
PDLVEISTGEENEQVVFSHRAKLYRYDKELGQWKERGIGDLKILQNYDTKRVRLIMRRDQ
VLKICANHWITAAMKLEPMKGAEKAWVWSAMDFAEVGEGNIEQLAVRFKLQDTANTFKQV
FEEAKIAQGKEELMTPVTSGVATSQDSGPAGSAKTATAVCGKAAIAILEETTKERTEISP
NIKQCAPGSPSLVTSSKTVVSPPKFVFGTDSLQKIFGTPKSPSVTEESASGLKAKDSGPP
AKALLAAPAFKIPEKGLDFRLFKDNPMAFWTSTSTTQFEPPGPPQAEGGGAGSDEDSDVE
VVYVREPTPEQAALARKLLLPLTFFCYQNEPGYSSDDQTDDEDYDSAVKALNGKLYPDPP
EKKAAACGDEPDCQVVWEKKPTPEEEEKAKSLQLPPTFFCGLSTTDSDTDHDKPEDFETE
VRKAQQDLDAQLNKDREVSSSTAEAPEEPTPGPSSSSTDTACSMSAPGEQTSDQPAETQS
EATSSSSPIDLSTKKSPEPESNTGTAVSTASTATTSQESSAFGFNSFGGFSFADLAKNTE
GFAFGTKDSNFSWANAGATVFGSTVPSAPKNNGDEEGSDEEEAPNNVDIHFEPIVSLPEV
ETKSGEEDEEILFKERAKLYRWDRDLSQWKERGIGDLKILFHPTKHFYRILMRREQVLRV
CANHTISQAMELKPMNASANSLLWTATDYSDGEGVVEQLAAKFKTPEIAESFKKTFCECQ
SRMGPTSGDASCISSPQMSRVQEHSRDSNPQVFLQVSVDGQTLGSITIELFSHIVPKTAE
NFRALCTGEKGFGLRDSIFHRVIPDFMCQGGDITNSNGTGGKSIYGSEFEDENFDVRHTG
PGILSMANHGRDTNNSQFFITLKKAEHLDFKHVAFGWVRDGMDVVQQMGELGTKGGTPTK
KLVVTDCGQL
NT seq
9213 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaagtaaggctgaagtggaccgttacgtttcctcagtacagagttcctctccc
tcactcaaagagaagccagtcaaagggtttttatttgctaaactgtacttcgaagcaaag
gaatacgaacttgcaaaaagacatgtatcagagtatctcaaagtccagcagagggatcct
aaagcacacaaattccttggacagctctatgagagagagggagacatcaacaaggcagta
ggatgttacaagcggtcagtggacttgaacccagcccagagggacctggtgctgaaggtg
gctgagttactggtcagtaaggaggaatgcgacagcagagcagagttctgggtggagaaa
gctgccaagctgctgcctggaaaccctgcagttttcaacctgaaggagcgtctgttgagt
cgtcagggtcagcagggttggaaccggttgtttgacctcctccaggccgagctggcagcg
aggccaggtgatgcacatgtgaacgtgaagctggttcaactgttctgtcaggacggtcga
ttggatgaggccgtcaagcattgcctggcagctgagaaaaggggcatgctgagcaacagt
ctggactggtacacagtagttgtgcgcacactgcaggaatatctggctcagcccagtgta
tcaagcaatgaaaagatgtgtcggcgtctccagagggagctgctattggcccactgcagc
ctgctgagaatcacactgtctgagagcagtttgcagcccagtcttgatgcactcagaagt
tttgaccaagctatgcagacactaagcagcgttgcaggtcgccacacggatgatctttgt
gaggtgtttgtggagatgagaggtcacctgtacctgcatgctgccacactgctgttgaag
ctggctcaggatcgccaacagacctggagggtcgtcattgacctggctgcactgtgctac
ctgcttgcataccaggtccccagaccaaagcctaaagtgaccaaaagagacctatcagcc
ccacagcttctggagttgctggccaatgatcgacagagtcaggcgggacacatgttgctc
aatctgagcactgattcatccaccttaatcagagaggtggtggaggcatttggaaaccgt
agtggtcaggactctctgtttgaactcctgtttggaccgcaggcctccactggatcttca
tttattgccaacgatgacattcgctccattaacaccacggctccagagctctctcaactt
gccaaatgggacaccggctccatccttctgcatggtggtgacttgcaacatctgagctgg
ttagggctgcagtggactcttctgggtcaaaaaccagcactgcgagactggctaccgcag
ctctttcctaggcttaccttggaaacctccaaactggacacaaatgcaccagagtctatc
tgcctgctggacctggaggtgtttatacatggtgtggtgttctgtagccactgtcagctc
caggagacggcgaagatcagcagtggaatgaaccagcagcaacaacagcagctctatgag
cctctctgtctcccccttcctctccttcgcctcctgaccactgacagacagagggagtgg
tgggacgccatctacagcctcattcacaaacgagcagcccctagcatgtcagccaagcta
cggatgattgtgcagcatggactgaacactctgagggctggagagaaacatgggcttcaa
ccagcactggccatccactgggctcagtgtctcagccagacgggtgatggagtgaactca
tactacgaccagaaggagtacatcagccgcagtgtccactactggaaagttgtcctccca
ctgttggaaaggatcaaaaacagacgcagtataccagaacccctcgacccccttttcata
cacttctcctccaaagatattcagattttctctgtgaagggttatgaagaagaattcaag
atagcatatgcagctctccttgacattgaaggcagaacagaggaggccattgctacctta
gaaaccatcaataacatgtcttccatctggcatttggctcagatctaccagcggttgtca
gaggaggccagcagtggggttgaggagacccaagacaggtgcatcactttcctgagaaag
ttcaggacctccctgtctaagatctacaatgccaatgctgacgacattgagaagctgcct
gtgtccatggaggaagttgtggacctcctgaatgatgtgaaccagcagctgggggagagt
ggggaggccatggatgaagaggaggagaaagaggaggggcgtcgaagaggaccagcccac
tctagtcctgctcatcccacagaaaccagtgccaccatatcccacattaagttatccact
ccctctcctaacaaaagcatggtctctccatccaaaagactgatttctcccaagacacca
cctcattgggtggaggaccagaagagtctccttcagatgttgtgtcagcaagttgaagcc
ctcaagaatgaagttcatgatctgaggcacaactcctcagggaatgcaggctctcctcat
aaaatgtatggggagagctatggggctgagggcctacaggagccgtttaccccagtccaa
tcctaccatggtgcccccctaacagttgccaccactggcccctctgtgtactacaaccag
tctccagcttataactctcagtatctcctgcgcacagcagctaatgtaaccccgaccaag
ggcccaatgtatagtatgaaccgtatgccacctcagcagcatatgtatgcttaccagcag
cccactcacacacctccattgcaagcaggcccaacctgcatttaccctcctcaagaacaa
gtctttggtgcccctctgcggtttgaatcaccagccacaagccttctttccccatatagt
gaagaatattatggccagagtgtaacccaacaaaccactaaccctcctctacctgaacct
ggctacttcaccaagccatctgtagtccccgttccgcctccaaagagcatagagaagcct
atggactttggaaagctgtccttcagccagcaggcacctgctgaagtccccaaagtgcct
agttttggagcaggggcagtcacccagtcaacaccttcagctgcttttaaattcaattcc
aactttaaatccaatgatggagatttcacattctcagcttctcaggccaagcatagtgaa
agtctgcttggtcttcttacgtcagacattcctactaaaacagacactgttccagagcag
cttccaactcaggaacagcccccaagccaaacaggcattttcactttcggcactaaaagt
gctactagcttctcttttgttgattctgcacagagcactggcacaggaagtctgtttgga
aaggtggaccagccatttaagtttggggatgttaccaggccagtgtttgggttatccagt
tatgcagcagcagaagaaagggcagcagagagcgacaatgacagcactcatgttgaggag
gatgaggatggtcctcattttgaacccattgtacctcttcctgataaagtagatgtgaaa
acaggtgaggaagaggaggaggagatgttttgcaacagggcaaagctgtatcgatttgac
acagagacaaaagagtggaaggagcggggtattggcaatgttaaaatcctaaaacacagc
accaaaggtaaggtgcgcctcttgatgagaagggaacaggtccttaagatctgtgccaac
cattacataactgctgatatgctactgagaccgaatgctggctccgacaaatcctgggtc
tggaatgccattgattatgcagatgaagagcctaagcctgagcagctggccattcgcttt
aaaacagtagatgaagcatcacttttcaaagctaagtttgaggaggcccagaaaattgtg
ctcaaatcaccagaaaagcacgatcaacaggagaagaaagaggaaagcttaaaagattct
gaatcactagcagcccagtttgcacttaaggaaggggaatgggactgcactgcatgctgt
gtaagaaataaacctacagatatatgttgtgtcgcatgtcaaaatgccaatcccaattcc
tcatcaaaaccagacattcaggccgttggtgaatccaaagccagcccctttactttcaaa
tttgggactgattcatcaagacccagtagttctggctctacatttactggatttggtgct
tttggagcctctataccctcttctttcacatttgggaccagcacctcaaaacctgccgac
acaccaaccagtgcatttggttctggctttggggttcagtttggaaagaagccaggggag
tgggactgtgacacttgttctgtgagaaatgaggcctctgcagacagttgtgtttcttgt
aaagctcttaaagcctcagccaaaactagtaccacagcacaaatcacagcagctgcagat
gcacctgtagcggacccccctacatgtgctgttgactctggttttggtgcccaatttagc
aagaagcccggacagtgggactgtgatgtatgtgaagtaagaaatgaagcctctgctgac
aaatgtgtcgcctgtaacagccctagcgcttctgctaaatcaacagagggggcttcagta
gcatcaaatctgccaacaatgtcaggatttggggctgattttgcaaagaaggatgagcag
tgggactgctttgcctgcgcggtcagaaatgatgcatcagctgctgaatgtgtttcctgc
catgccccaaaccagactccctctttagaagctatgtttgccaagaaggatggagaatgg
gattgtgatacttgtttggtgagaaacaatgcctctgccagtaagtgtgtggcttgtcag
acaccaaatcccaatgctaaaagcacaaccagcactgctccatcagcctccaccttcagc
ttcacctttggaaccaagggttcatcaagtcagcccgctggaactggattcacaatgcct
tttggaactggcagcacttttcagtttggtcaaaacaaagataaaagcttggctacttct
ttcaagtttgatgctcctcagtctggatctggtaccacaagtgcttcaggcttctctttc
tcaatgcccattccagctagtggcttcaaatttggcattcaagacactgcaaaagagact
ccctcaactgataatctaacacttcaatcagggtcagcctctagttttcttaaaagcata
gctgacaaacacaatgagaaagaaaacgtatctacaccctcattggaccaaacagaacaa
gatcaaaatccattaattgctggaaaaaccaatacattcagttttgctgacctggcaaaa
tcctctggagcagaattccagtttggccacaaagaccccaatttcaaaggtttctctggg
gctggtgagcaggtgttctcatcattccagtcaacccccaccaaaacagatgcctcaaat
gaactggaggatgatgacatgtataaaacagaggaaaatgacgatatccagtttgaacca
gtggttcagatgcctgagaaggtggacctggtgacgggggaggaggatgaacaggttcta
tattctcagcgtgtcaaactgttcagatttgactccaacacaagccagtggaaagagcgt
ggtgtaggaaccctgaaattcctgaaaaacaacaacaatggcaggctcagggtgctgatg
agaagagagcaggtcctgaaggtgtgtgccaaccactggataaccactactatgaatctt
aagcccttggcaggctccgataaagcatggatctggatggctaatgacttttctgatgga
gatgctaaactcgaacagttagctgctaagtttaaaagcccagagcttgctgaggagttt
aaagagaagtttgaagagtgtcagagacttcttttggacatccccctacaaaccccccac
aaacttgttgacacaggcagaacagcacatctcattcagaaagcagaggaaatgaagtct
ggtttgaaagacctgaaattctttttgacagatgagaaaacaaagatcaaagatgatgac
agccagggagacattacaacatccaacaatgtttcaagccttgtaatcaaggctcacagt
gaaaccgctggccccaccttggagtgggataactacgacctacgagaagaagctttagat
gataccgctgacacatcagtctatgcctctcccatcgctagtagccccctgagaaagaac
cttttccgctttggagaatccactggtgggttcagcttcagcttccaacctggcatcagc
ccctctaagtctcctgctaagcttaatcagagcagaacctcagtgggtactgatgacgag
caagatgtaacccaggatgaggagagggatggccagtactttgaacctgtggtccccctg
cctgatctggtggagatttctacaggagaggaaaatgaacaggtagtcttcagtcacagg
gccaaactgtatcgctatgataaggaacttggtcagtggaaggagaggggtattggagac
ctcaagatcttgcagaattatgacaccaaacgagtcaggttgataatgagaagagaccag
gtacttaagatctgtgccaaccattggatcacagcagccatgaagctggagccaatgaaa
ggtgctgagaaggcctgggtctggagtgccatggattttgctgaagtaggagagggtaat
attgagcagttggctgtgagattcaaactgcaggataccgcaaacacattcaaacaggtc
tttgaggaagctaagattgcacaaggaaaagaggaacttatgactccagtgacatccgga
gttgccacgtctcaagacagtggtcctgcaggatctgcaaagactgctacagctgtatgt
gggaaggcagccatcgctattctggaagagaccacaaaggaacgtacagagatttccccc
aacattaagcaatgtgcccctgggtctccgagtctagtgacctcctcaaagacagtagtg
tctccccctaagttcgtctttggcactgatagccttcagaagatttttggcactcctaaa
tctccctctgtgactgaggaatctgcatctggtttgaaagccaaagattctggacctcca
gccaaggctttgcttgcagcacctgcattcaaaatcccagagaaagggctggattttagg
cttttcaaagataacccaatggctttttggaccagcacatcaaccacccaatttgaaccc
ccaggcccccctcaggcagaaggaggtggcgcagggtcggatgaggactcggacgtggag
gttgtctatgtcagggaacccactcctgaacaggcagctttagccaggaaacttctgctg
ccactcaccttcttctgctatcagaatgaaccaggctactccagtgatgatcagactgat
gacgaggactatgattcggcagtgaaagctttgaatggaaagctctaccctgatcctcct
gagaaaaaggctgcagcatgtggtgatgagccagattgccaggtggtgtgggagaagaag
ccaacgccggaagaagaggagaaggccaaaagcctccagctcccacccactttcttctgt
ggcctgagcaccacagacagcgacacagaccacgacaagcctgaagactttgaaacagaa
gtccgcaaggcacagcaagacctggatgcccagttaaacaaagacagagaggtctccagc
agcactgctgaagccccagaagagccgacaccaggtccgtcatccagcagcacagacact
gcatgcagcatgtctgcacctggggagcagacctcagaccagccagcagagactcagagt
gaagctactagtagcagctctcccattgacctgtcaacgaagaagagcccagagccggag
tccaacactgggactgcagtgtctactgcttctactgctacaaccagtcaagaatcctcc
gcttttggcttcaactcattcggtggcttttcttttgctgacttggccaaaaacacagaa
ggatttgcatttggaaccaaagactccaacttctcgtgggcaaacgctggagcaacagtc
tttgggtccacagtgccctcagcaccaaaaaacaacggtgatgaagagggcagtgatgaa
gaggaagctcctaataatgtggacattcactttgagccaatagtgtcactgccagaggtg
gagacaaagtctggagaggaggacgaggaaatcctgttcaaggaacgtgcaaagctgtac
cgatgggacagggacctgagccagtggaaggagcgcggcatcggtgacctcaagatcctc
tttcacccaaccaaacatttctaccggatcctgatgagaagagagcaggtgctgagggtt
tgtgccaaccacaccatctcacaggcgatggagctcaaacccatgaacgcctcagctaat
tcactgctgtggactgccactgactactcagacggcgagggtgtagtggagcagctcgca
gccaagttcaaaacccctgagatagctgaatcattcaagaagaccttctgcgagtgtcag
agccgaatgggcccaactagcggcgatgcctcgtgcatctcctcaccacagatgtctaga
gttcaagagcactccagagacagtaatccacaggtgttcctccaagtgtcagtcgacggc
caaacactgggctctatcaccatagagcttttctcccatatcgtccccaagacggcagag
aacttcagggctctctgtactggcgagaaaggctttggactgcgggactccatcttccac
agagtcataccggacttcatgtgtcaggggggtgacatcacgaacagcaacggcacagga
ggcaagtccatttacgggagcgagtttgaggatgaaaacttcgatgttcggcacacaggc
ccaggtattctgtcgatggccaatcacgggcgcgacaccaacaactcacagttcttcatc
accctgaagaaagccgaacacctggacttcaaacacgtggctttcggctgggttcgggat
ggcatggatgtggtgcaacagatgggggagctgggcacgaagggaggcacgcccacaaag
aagctggtcgtcacagactgtggacagctgtag
DBGET
integrated database retrieval system
