Xiphias gladius (swordfish): 120801229
Help
Entry
120801229 CDS
T07311
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120801229 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120801229 (nup50)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120801229 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
120801229
NCBI-ProteinID:
XP_040003863
LinkDB
All DBs
Position
LG2:complement(1093611..1105010)
Genome browser
AA seq
493 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSVASEDVLKNRAIKKAKRRNTGAEGESGGAFKG
FKGFSLTTSAASGGSTPTVFSGFGNGGGFKGLGALTNGNSVAPSFGGFSSPATSTATPGL
TFNGPTSAKPTADITAKQTNGSTPSPNQSSSTDGGGGSSSGSVSNKEYSRQLTALNCSVR
DWITKHVNDNPLCDLNPIFRDYERHLASIERQYGAGSAASAEGGSEEKKQGGMLPSTATP
PPPPPPSSSSSSSSSSSSSSAAPAPAATLFSFGKKTTEDSTWDKSSTAAPIPAGVTFNFG
QKVDSSVLGSLGSKTTTPSFSFSSSSSSSASSSQTSLFGAPGSAPLSFSGTKAEDAQPAD
ENGDEESEEPPKPEVKEVKEEDAFYSKKCKMFYKKDSEFKEKGVGTLHLKQTADGKTQMI
IRADTNLGNILLNIIVQSSMPCSRVGKNNVMVVCVPNPSVDDGNPSGPVPLLIRVKTAED
ADELHKTLEEKKG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaggatcgctgataaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggcggggacgttttcagttgcgagtgaagatgtgttgaagaatcgagcgatt
aagaaggccaaacgccgaaatactggagcagagggtgaaagtggaggagctttcaaaggt
tttaaagggttttctctgaccacatcagcagcgagcggaggctcgactccaactgtgttt
tctggttttgggaacggtggaggatttaaaggcctcggcgctctgaccaacggaaacagc
gtcgctccttcgttcggtggtttctcatctcctgcaacgtccactgctacaccaggtcta
acattcaacggccccacctctgccaaacccaccgctgacatcaccgccaagcagaccaat
ggctccaccccgagcccgaatcaaagctccagcaccgacggtggcggcggcagcagcagc
ggcagtgtcagcaacaaggagtacagccggcagctcaccgcgctcaactgctctgtgcga
gactggatcaccaaacacgtgaacgacaaccctctgtgtgatctcaaccccatcttcagg
gattatgagcgacacctggccagcatcgagcggcagtacggggccggatctgctgcttcg
gccgagggaggctcggaggagaagaagcagggagggatgctgccgagcacagccacccct
cctcctcctccccctccatcttcctcctccagcagcagcagcagcagcagcagcagctca
gcggctccagctccagctgccactttgttctcctttggtaaaaaaacgacagaagactca
acctgggacaaaagctccaccgccgctccgatcccagccggcgtcacgtttaacttcggt
cagaaggtggacagctctgtcctcggctccttagggtccaaaacgacgacacccagcttc
tccttctcctcctcctcctcctccagcgcctcctccagtcagacctccctgtttggagct
cccggatctgctcctctgtccttcagcgggacaaaagccgaggacgctcagcctgcagac
gagaacggagatgaagagtcggaggagccgcccaagcctgaagtgaaagaggtgaaagag
gaagatgctttctactcaaagaagtgtaaaatgttctacaaaaaggactcggagttcaaa
gagaaaggagtgggaacgctgcacctcaaacaaaccgcggacggaaaaactcagatgatc
attcgtgccgacaccaatctgggaaacatcctgctgaacatcatcgtgcagtcgtccatg
ccgtgctcgcgggtcggtaagaacaacgtgatggtggtttgcgtcccgaacccgtccgtc
gacgacggtaaccccagcggccccgtccccctgctcatccgggtcaaaaccgccgaggac
gccgacgagctccacaagaccctcgaagagaagaaagggtga
DBGET
integrated database retrieval system
