KEGG   Xiphias gladius (swordfish): 120801237
Entry
120801237         CDS       T07311                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03410  Base excision repair
xgl04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120801237 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    120801237 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120801237 (parp4)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120801237 (parp4)
SSDB
Motif
Pfam: VIT PARP VWA_3 VWA VIT_2 VWA_2 BRCT_2 BRCT VWA_CoxE TniB
Other DBs
NCBI-GeneID: 120801237
NCBI-ProteinID: XP_040003869
LinkDB
Position
LG16:complement(24113953..24142157)
AA seq 1854 aa
MAVFENCSVLLELKNLPFKEKKRVKSAVTENGGDISFVVNKQCSLIVTSDASNLSSNRLR
SIQRCRTPVVGVEYVYSCLDRGLLLPVDEYKLDPSSPSAFSPPPLPPSSPRPGPVSHHCV
IFTGESEGAASAAAAELPRGPAKPVDAVGLTQKAEAPVGSGRVLEKFRVYTETDSDLPSY
PENFQVAKYSVFEKINSNTWCVLELQSVKGESGRRYRVVKYWKNDMGATKGAVKDTLVFL
STSEEALEVYQALRETLRAAGLQPRSNIPPQAWDLGSTALQQLLLEERLNAGSLSQEVGV
FVELLWTEALGYLGNVLGVSIDKLSLNDVSRAEGLLLQAQRKLREANHTEVASLLAEVLT
LLPHRVPHLPPNAKLISQKLDLCQLIRDVLNVSETTLRSPAPSCLGKYRALRCSIETVPR
TSSEFRAATALLRKREVQIQQVLRVSRGVELQTFRSELGNIRPLLHSSSPSNFVGILSRG
LLLPRVGVEHHGIERTDIGNLGGGIYFSDAVSASLKYSKPSVTDGSRLLLVCDVALGSCR
DVHRRDLALTEAPEGHHSVHGVRRTPNTPSEFEDDEYVVYSPDQVKLKYVVQFSIEGDQL
KEFSPAVNASAEPCLPSADQELGLEDDGVESIKDPLEDVTAGLLDSSGQQLPLQAVHVKC
RLMDLLSQVIIFQKYTNVSSVPIEAKYVFPLDDSAAVCGFEAFIDGKRVVGKVKEKEKAR
KEYKQAIERGHGAYLMDQDAPDVFTISVGNLPPGATVLIKVTFVSELMVRDGGILFSLPG
SVAPWQESAALNQTTQVTVAKVCVTDEAASRREFTLDMSIEMPYEITSLRCITHKVKIKR
TDCKAVVSVLPGEVMGADGFELSVTLSEVHLPRMWVEKHPDKDSQACMLVFYPDFDLDSG
SASDEVVLLLDTSESMRGESLHMAQRIALQVLKALGQNLRVNVILFGTDHTEAFLTAQPL
VEARQTAESFIKHFSPVGGSTELWRPLRALSLLPPSRGIRNLLLLSDGHIQNAELTLQLL
RDNAQHSRLFTCGLSPTANRHMLRALAQAGGGAYEFFDTKIKHTWGKKVACQVKRIASPG
CSSVSVKWRQFNPTAPPPVQAPKQLHALFNDCHTLVYGFVPHCTQATLLGNLSGKELKTM
VSTSELQKSRGTFLHKLTARALIRDYEDGSLDTNEAEHEGKKAELKSFIIELSKEFSILS
QFTSFVAIEERDAEQPEKGFTDIPKLIAEEDVDFLPYISWIFPQDSEEEKENADEEGGCF
EEEEKNFVDLSESYFMEEDYNDIEGNLCCILQGSISPDYSPMRASRASVASPLKFHTDSQ
AVIGAPQAKKEGWFMRSAKEKHDEMEYLSAVEIHDLADTVQGKVSHTPSPPPRPHPMCFS
KLVQTQFSDSPISPPTPPPPPAFIHSQSPKFDPPHPLLPRCPASYLEPMSHPVVHGRPSL
LTQTVETDKGFGKTEQVSKSLQASRGPMSASRNLFSLPIISTQLQRAALADRSAVSLSKG
LDLDMCLGSEDISFDPMGCMSYPAGPASAPECSAKSVWSLTNEASPNSVTPAHTTDFKSF
SLRRSKRSFEVEQALGFGFSGSEVRQELFGTSGPPLPQVQPQEEIFSFGVCRGRGDVQPR
RFSFREELDQSEPAPVESVPQPVLRKRLQLRSGLRRTTSETAQGFTQKVGEHLFLQSLPV
HHSFERKSRDPEVLELKWTKIFQMQHSEGYWELTTELGELISVNVDVFANVFLKNKGIRS
LGVRAHADILRMVATLLVLQLMRVEKLEEGKLLRTLFCLDNSSQPRPGRWEEVKRAVEWV
CWADHQYPCVYSRLEFGSSWDSSTRQLLGHEGLPPFSPLSGLNLQRTAAPLPIH
NT seq 5565 nt   +upstreamnt  +downstreamnt
atggctgtgtttgagaactgctccgtgcttctggagctgaaaaacttgcctttcaaggag
aagaagagggtgaagtcggcggtaacagagaatggaggcgacatttccttcgtggtcaac
aaacagtgctctctgatagtgaccagtgacgcgtccaacctgagctccaacaggctacgt
agcatccagaggtgccgcactcccgtggtcggggtggagtacgtgtacagctgcctggac
agaggactccttctgcccgtggacgaatacaagctggacccttcctctccgtccgccttt
tcacctcctcctcttcctccctcctcgccgaggccaggtccagtctcacatcactgtgtt
atctttacaggcgagtctgaaggggcggcgagcgcggcagcggctgagctgcccagaggc
ccagccaagcccgtggacgctgtcggtctgacccagaaggcagaggcgccggtcgggagc
ggacgcgtcctggaaaagttcagagtttatactgaaactgattctgatcttccttcgtat
ccggagaatttccaagtggccaagtattcagtctttgaaaagataaacagcaacacttgg
tgtgtgctggagctgcagagtgtcaaaggagagagtggacggcgataccgcgtggtcaag
tactggaagaatgatatgggagccacgaagggggcagtgaaggatacgctggtgtttctg
tccacctcagaggaagctctagaggtgtaccaagcgctgagagagaccctgcgcgctgct
ggtctgcagccgaggagcaacatccccccacaggcctgggacctgggctccaccgccctg
cagcagctgctgctggaggagagactgaacgcagggagcctatctcaggaggtgggcgtt
tttgtggagctgctgtggacggaggccctgggctacctaggcaacgtcctcggagtttca
atcgacaagctcagcctcaatgatgtgagcagggcggagggcttgttgcttcaggctcag
aggaagctaagggaggcaaatcatactgaggttgcatctctcctggcagaggttctcacc
ctgcttccgcacagggtgccccacttacctcccaacgccaagctcatctctcagaagctg
gacctctgccagttaattagagatgttctgaacgtgagtgagactactctgagaagcccc
gccccttcctgcctggggaagtaccgcgccctgaggtgcagcattgagaccgttccccgc
accagctctgagtttcgggccgcgactgctctgctgcggaaaagagaggtgcagatccag
caggtcctgcgtgtcagcagaggggtggagcttcagacgtttaggagtgagctcgggaac
attaggccacttctccattcctccagccccagcaactttgtggggatcctgtctcgtggt
ctgctgttgccccgtgttggagtggagcatcatgggatagagagaacagacatcggtaat
ctgggcggtggaatctacttcagtgacgcagttagcgccagtttaaaatactccaagccc
agtgtgacagacggctctcggctgctgttggtgtgtgatgtggcgttgggaagctgtagg
gacgtccacaggcgagacctcgcgctgaccgaggcccctgagggacatcacagcgtgcac
ggggtccgccgcacccctaacactccctctgagtttgaggatgatgagtatgtggtgtac
agtcccgatcaagtgaaactgaagtacgtggttcagttcagcatcgagggagaccaactg
aaggagttcagtcctgccgtcaacgcctccgctgagccgtgtctgccttctgctgatcaa
gagctcggtttggaggatgatggggttgagagcattaaagacccactggaggacgtgacg
gcgggactgttggacagctctggtcagcagctccctctgcaggctgtccatgtgaagtgc
agactgatggatctgctctcgcaggtcatcattttccagaaatacaccaacgtgagctcc
gtgcccattgaggcaaagtatgtcttcccattggatgattctgcagcagtgtgtggattt
gaagctttcatcgatggaaaacgtgtggtgggaaaggtgaaggagaaagagaaggctcgc
aaggagtacaagcaggccatcgagagaggtcatggagcatatctcatggaccaggatgcc
cccgacgtgttcaccatcagcgtgggcaatctgccgcccggtgcgaccgtcctcattaaa
gttacctttgtgtccgagttgatggtcagggatgggggtattctcttctccctgcctggg
agcgtggccccgtggcaggagagcgcggcactcaaccagaccacacaggtgactgtggcg
aaggtgtgtgtgactgatgaggcagcaagtaggagagagttcaccctggacatgtcaatc
gagatgccctatgaaatcaccagcctgcggtgcatcactcacaaggtcaagattaagaga
acagactgtaaggcagtagtgagtgtgctcccaggagaggtcatgggtgcagatggtttc
gagctgtcggtcactctgtctgaggtccaccttcccaggatgtgggtggagaaacaccca
gacaaggacagccaggcctgcatgttggttttctatccagactttgacctcgactccggc
tcagcatccgatgaagtggtcctgttgctggacacgtctgagtccatgagaggagagtct
ctccacatggcccagagaatcgcccttcaggtcctcaaagccctcggccaaaacctcaga
gtcaatgtcattttatttggcacggatcacacagaagcgttcctgacggcacagccgctc
gttgaagctcgtcagacagcagagagcttcatcaagcacttctccccagtaggcggcagc
actgagctgtggcggccgctgcgtgctctcagcctgctgcctccatcccgtggcatcagg
aacctgctgctgctgtcggacggccacatccagaacgcggagctaactttgcagctgctc
agagacaatgctcagcacagccgcctcttcacctgtggcctaagccccacagccaatcgg
cacatgctgagagcactggcccaggcagggggtggagcctacgaattcttcgacacaaaa
atcaaacacacctggggaaaaaaggtggcatgtcaagtgaagcgtatagcatctcctggc
tgcagttcggtgtcagtgaagtggcggcagttcaaccccacagcgccacctcctgtgcaa
gcccccaaacagctccatgctcttttcaatgactgtcacaccctggtttacggctttgtg
ccacactgcactcaggcaaccctccttggaaacctgagtggtaaggagttaaaaaccatg
gtgtcaaccagtgagctgcagaagagcaggggcacatttcttcacaagctcacagcaagg
gccctcatcagggattacgaagacggaagcctggataccaatgaggctgaacatgagggg
aagaaagcggagttgaagtccttcatcatcgagttaagcaaagagttctccattctgtct
cagttcaccagctttgtggccattgaggaaagggacgcagaacaaccggagaagggtttc
acagacatccccaagctgatcgcagaagaggatgtggacttcctcccctacatcagctgg
atttttcctcaggatagtgaagaggaaaaggaaaacgcagatgaggaaggagggtgtttt
gaagaggaagaaaagaattttgttgatttgtctgaaagttattttatggaggaagactac
aatgatatagagggaaacctatgttgtattttacagggctcaatctctccagattattcg
ccaatgagagcctctagggcatctgttgcatcgcctctgaaatttcacacagacagtcaa
gcagtcattggtgccccacaggcaaaaaaagagggatggttcatgaggtccgcaaaagag
aagcatgacgagatggaatatctttcagcagtagagatacatgacctggctgacacagtc
caagggaaagtttcccatactccttctccccctccccggcctcatcccatgtgcttttct
aaacttgtgcagacccaattttcagactctccaatctctccacctacacctccgcctccc
cctgctttcattcattctcagtcccccaagtttgatccacctcatcctcttttgcctcgt
tgcccagcttcttatctggaacctatgagtcaccctgtcgttcatggcaggccatctcta
ctcactcagacagtggagacagacaagggtttcggaaagactgaacaggtttcgaaaagt
ctacaagcttccaggggaccaatgtcagcatctcgtaatctgttctctttacctataatt
tccacacagttacaacgtgcagctcttgctgatcgatcagccgtgagtctttcaaagggg
cttgatttggatatgtgtcttggctcagaagatatttcctttgaccctatgggatgcatg
tcatacccggctggacctgcatctgctccagaatgttctgcaaaatcagtatggtctctc
acaaatgaagcatctccaaactccgtgacaccagctcatacaacagactttaaaagcttc
tctttacggaggagcaaacgcagttttgaagttgaacaagctttaggttttggtttctct
ggctctgaagttagacaggaactttttgggacatcagggccccctctgcctcaagttcaa
ccccaagaagagatattctcatttggagtttgtaggggtagaggggacgttcaaccaaga
cgcttttctttcagggaagaattggaccagtctgaacctgcacctgttgaaagtgtgcct
cagcctgttttaaggaagagacttcagttacgttcaggtctccgtcgaactacatcagaa
actgctcaaggctttacgcaaaaagttggggagcacctttttctccagtccctaccagtt
catcattcatttgagagaaagtcaagagatcctgaagtactggagctcaaatggacaaag
atcttccagatgcagcattcagagggctactgggagttaaccacagaactgggtgaatta
ataagtgtcaatgtcgacgtctttgccaacgtgttcctgaaaaacaagggcattcgttct
ctaggtgtgagggcgcatgcagacatcctgaggatggtggcgactcttctggttctgcag
ctgatgagggtggagaagctggaggaaggcaaactgctccgcaccctcttctgtctggac
aactcctctcagcccaggcccgggcggtgggaggaagtgaagagggcagtggagtgggtt
tgctgggctgaccatcagtacccgtgtgtctacagccggctggagtttggctcgagctgg
gactcctccacccgtcagctgctgggccacgaaggcctcccccccttctcgcctctcagt
ggtctgaacctgcagagaaccgcagcccctctaccgatccactga

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