Xiphias gladius (swordfish): 120801256
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Entry
120801256 CDS
T07311
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120801256 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120801256 (clasp1a)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120801256 (clasp1a)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120801256 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Adaptin_N
Cnd1
Sec7-like_HUS
ParcG
Dopey_N
HEAT_DAAF5
MMS19_C
TAN
TPR_20
Motif
Other DBs
NCBI-GeneID:
120801256
NCBI-ProteinID:
XP_040003912
LinkDB
All DBs
Position
LG16:complement(3145514..3250759)
Genome browser
AA seq
1637 aa
AA seq
DB search
MMEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRAQVGTVLPSLIDRLGDAKDQVRDQDQTLLLKIM
EQAATPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMISSSGSD
KNFEDEDSMDGGRSSSSSSSKAPPSGRRTVMSAVRRPSSATPAKATGKEAGAGAVDEEDF
IKAFEDVPSVQIYSNRELEDQLTKIREVLSDEKHDWEHRVVALKKIRSLMLAGAAEYDGF
PQQLRLLEAPFKLSAKDLRSQVVREACITLGYLSSILGNKFDHGAESVMPILLNLVPNSA
KIMATSGMATIRLILRHTHYPRLIPIITSNCASKSVAVRRRCYEFLDLMLQEWPSNTLER
HVAVLTETIRKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSARVPTTSGSLQRSRSDID
VNAASNAKSRLSTVPASSPFSSAAALPPGSYASLGRVRTRRQSSGSVGGASTSVVDSRGR
SRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRATASASTTPADKRSRIPRS
QGCSRETSPSRLGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSRESSRDTSP
ARGFTPLASRRHSRSTSALSTADPHSQSDRYGLIHQARISASVNAMRVLNTGTEVEAAVA
DALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDV
AEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMF
LETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQFN
ILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSS
DVRKTLHNWVSEELTCRSSTAALLSTEGNQEERCKQAAQVVLIALFELNTPEFTMLLGAL
PKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPPRHTPSRTSPLTSPTNCSHGGLS
PSRLWGWGVDGLSKHPPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTENMNSEEIYS
SLRGVTEAIQSFSYRSQEDLNEPIRREGKRDDAAGREGVASSPGSDARLGLDMVEGGRTA
LDNKTSLLNTPSPRSFSGPRSREFAPYGYGDTICTYDKSALKEAVFDDDVEQFRDCRRQE
SGENKMTVPKVFAPVSQDHSDLVADLLKELSNHNERSEERKGALVELLKITREDSLAVWD
EHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHK
EVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAKDSLLQL
LPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRA
QTTNSNSSSSSDVSSHS
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctggcccaggtcctacagaaggacatgggccga
cggctgcaggtaggacaagagatcattgattacattttggacaaggagaagtctcacgac
ctggaacaggatcagacagcactggacaaaatggttgacggcatcgccagctcctgggtc
aactccagcaacttcaaggtggctctgcttggcctggacctcttatctgccttagtgaca
aggttacaggagcgattcagggcccaggtgggaacagttctgcccagccttattgatcgt
ttgggagatgccaaagaccaagtgcgagaccaagaccaaacactgctgctaaagatcatg
gaacaagctgccacgccgcagtacgtatgggacagaatgctgggaggcttcaaacataag
aacaacaggaccagagaaggagtgtgcctttgcctcatcgccacactgaacacatatgga
gctcaaggcctgaccctcagtaaaattgttccccacatatgtaacctcttgggggacccc
acaagtcaggtacgtgatggagctatgagctgcttggtagagatctacagacatgtgggt
gagagggtgaggatggatctcagcaagaaaggcctgccacagtcacggttgaatgtaatc
ttcagcaaattcgatgaagtccaaagatccggaaacatgatctcatcctctggctcagat
aagaactttgaggatgaggactccatggatggaggccggtcctcctcctcatcatcctca
aaagcaccccccagtggcaggaggactgtaatgagtgctgttaggagacccagctcagcc
accccagctaaggccacaggtaaagaagcaggtgctggtgctgttgatgaagaggatttc
atcaaagcttttgaagacgtgccctcagtccagatctactctaacagggagctagaggac
cagctgaccaagatcagagaagtgttgtctgatgaaaaacatgactgggagcatcgagtg
gtggcgctgaagaagatccgttcgctcatgttggctggggccgctgagtatgatggtttc
cctcagcagctgcgtctcctggaggctccattcaagctatcagctaaggacctgcgctcc
caggtggtccgcgaggcctgcatcacactgggatatttgtcatcaattctgggtaacaag
tttgaccatggagcagagagtgtcatgcccatactgctgaaccttgtgcccaacagtgcc
aaaatcatggccacatcaggaatggccaccatccgcctcatcctcaggcacacacactac
ccacgtttgatccccatcataaccagtaactgcgcctccaaatccgtagcagtaagaagg
cgctgttatgagttcctagacctcatgttacaagagtggccctctaatacactggaaaga
catgtggctgttctgactgagaccatcaggaaaggcatacacgatgctgactctgaggcc
agatccattgctagaaagtgctattggggtttccatggacactacagccgggaggcagag
catctgttccaggcgctagagtccacctatcagaaggccctccagtctcacctaaagagc
tctgacagcattgtgtctctaccccagtctgaccgttcctcatcgtcttcccaagagagt
cttaaccggccattgtctgtgaagagtgtcattggagggagcataacaaggagtaagctg
gtgagcgccagggtgcctactacatcgggttccctccagcgttcccgtagtgacattgat
gtaaacgctgcctctaatgccaagtcacgtctgtccaccgtccccgcctcttcaccgttc
agctctgcagctgcccttcccccagggtcctacgcctcattaggtcgtgttcgtaccagg
agacagagctccggcagtgtgggtggagccagtacttctgtggtggacagcaggggacga
agccgagccaaagtggtctcccagtcccagcgatccagatcagccaatcccatcagtgct
ggcagtcgctccagctccccagggaaactgcttggccacagcagctatggccggatccct
cgagccacggcgtcagcctctaccacgccagctgacaagcgcagcaggatccctcgcagc
cagggctgcagccgagagacgagtcccagccgattgggtcttgccagcctgtgtggtaaa
gctcttcttcctgctgctcttccctaccgcacgctagcccggagccgcattccccgcccc
agcatgagtcaaggttgcagtcgcgacaccagtcgcgagagcagccgtgacaccagccct
gctcggggcttcactcctctggcctcccgacgtcactcccgttcaaccagcgcgctctcc
acagccgatccccacagccagtcagaccgatatggtttgattcatcaagcgagaatctct
gcatcagtcaatgccatgagggtccttaatactggcactgaggtggaggcggcagttgct
gatgctctgctattaggagactccaggaataagaggaagccattgaggcggaggtacgaa
tcaccagggatgtactctgatgatgatgccaacagtgacgcatctagcgcctgctcggag
cgctcatacggttcacgaaatggaggcataccccattacctgcgccagacagaggatgtc
gcagaggtcctcaaccattgtgccagctccaactggtcagagcggaaggaaggcctactt
ggcctgcagaatctcctcaagagccaaagaatactaagccgagtggaactgaaacgactt
tgtgagatcttcacaaggatgtttgcagatccccatagcaagagagtgtttagcatgttc
ctggagactcttgtggacttcgtcacagtacatagggaggacctgcaggactggcttttt
gtcctgctcactcagctgctgaagaaaatgggggcagacctacttggttccgtccaagcc
aaagtccagaaggccctggatgtcacaagggagtctttcccatttgaccaacagttcaac
attctgatgaggtttatcgttgatcagactcagacaccaaacctcaaggtaaaggtggcc
attttaaagtacatcgagtccctggctcgacagatggacccgacggattttgtcaactcc
agtgagacacgcttggctgtatcgcgcatcatcacctggaccactgaacccaaaagctct
gatgtcaggaagacccttcataactgggtgagcgaggaactaacttgcaggtccagtact
gcagccttactgtctactgagggcaaccaggaagaaaggtgtaagcaggcagcccaggtg
gtgctgatcgccttgtttgagctcaacaccccagagtttaccatgctgctgggagccctg
cccaaaactttccaggacggagccaccaaactgctacacaaccacctgaaaaactccagc
aataccagcagcagtgtggggtctccgagcaataccattggacggacgccacctcgccac
acccccagcagaaccagccccctcacatctccaacaaactgttcccatggaggactgtct
ccaagtcggttatggggttggggtgtcgacggactgtcaaagcaccctcctgcccctcct
cctcctcctccgcctcactccacccctgctgccccctccctaagggtcctgcgcagagca
tattcacccagtatgatggagtatgacaccgagaacatgaactctgaagagatctacagc
tcactgcgaggtgtgacagaggccatccagagcttcagctaccggagccaggaggacctg
aatgagccaatcagacgggagggcaagagggatgacgcagctgggagagaaggagtagca
tcgtcccctggctctgatgctcgcttgggcttggacatggtggaaggaggtcgcactgcc
ttggacaacaaaacctcactactcaacacaccatcaccacgctctttttccgggccacgg
agtcgtgagtttgccccttatggctacggagataccatttgtacctatgacaagagtgcc
ctgaaggaagctgtctttgacgatgacgtggagcagttccgcgactgccgacgtcaggaa
agtggtgaaaacaagatgacggtccccaaggtgtttgctcctgtcagccaggaccactca
gaccttgtagccgacttgcttaaggaactgtccaatcacaacgagcgttctgaggagcgt
aaaggtgccctggtggagctgctgaagatcacgcgagaagacagcctggctgtgtgggac
gaacactttaaaaccatcctcctcctcctgctggagacactgggtgataaagatcacacc
atccgagccctggccctgcgtgttctgaaagaaattctgaggaaccagccagctcgcttc
aaaaactatgcggagctaaccatcatgaagactctggaggctcacaaagactctcacaag
gaggtggtgcgtgcagctgaggaggcggcgtccaccctggccggttccatccacccggag
cagtgcatcaaggtgctgtgccctattgtgcagacagccgactaccccataaacctggct
gccatcaagatgcaaaccaaagtcattgaacgcattgccaaggactcgctactacagctg
ctgcccgacataatccctggactcctacagggctatgacaacacagagagcagcgttcgc
aaggccagcgtgttctgtctggtggctatctactctgtgattggcgaggagctcaaaccc
cacctggcacaactcacaggcagcaagatgaagttactgaacctgtacatcaagcgggcc
caaacgaccaacagcaatagcagcagttcctcggacgtctcctctcacagttaa
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integrated database retrieval system
