Xiphias gladius (swordfish): 120801318
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Entry
120801318 CDS
T07311
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120801318 (ttf2)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120801318 (ttf2)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
YjfB_motility
Motif
Other DBs
NCBI-GeneID:
120801318
NCBI-ProteinID:
XP_040004089
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Position
LG16:23174305..23189994
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AA seq
1148 aa
AA seq
DB search
MEKIVCNVHGSLCMLKTGVKDGPNKGRSFYVCVDKQGCDFSQLASISPSHCLHHEDSMVE
LQALTYSQQQQSHRLFYRCIIGKKAGQRWCGNVPWTAPDKERRNPLSDTQLQPSCLPPVR
NPFKAPAKPDKDSEWRRMQCGGGNEKVREEKDSEASHKAEGRKSSKKENVESVGAGVEEE
EEEKKLNSSDTYRGKQLPQGMKLKKRVTDEERNSPKANSVEEIKDKLQDKTEENHTEQGK
TEKADSTSSGNAVNSEKMDKTSQDPHKDSPQQPTTGETCLVKQADPNVKESASKSEPGSS
AQAPRDSVTTRTPTSNKTTESESSQTKNHQDDDSDDVVLVSVKPATQKTPPVSAVQKTLT
TFPGFQPASKLKGQQRDPEGLHSLLTAQLQQKKATLSVVNVAALPDKGERLRTQVKELEE
ALESLSLTAASQPGSQAGCSSSDANPGSSQVNPFSRQGGTILLPAPPGPPWPQASGSSLG
LELSHGYTQMYGANPQNQAYYGGRMTEDRLLVVKNATCEAIDHLHKSLESCPDAEAEAPD
PKGIKVSLLAHQRRALAWLLWREAQNPCGGILADDMGLGKTLTMISLILAKKIKAKEEDE
KKEEKKLEKWISKTDSSLVVSKGTLIICPASLVHHWKKEIERHVKAGKLTVYLYHGPNRE
KRAKVLADYDVVVTTYSLVSKEIPVQKEEADKPAADSDDVPLHSAPLLRVAWARVVLDEA
HNIKNPKVQTSMAVCQLRARARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKAQVD
NGSKRGRERLNILTRSLLLRRTKNQMDSTGKPLVSLPDRTCEVHRLKLSEDEQAVYDVVF
AQSRSTLQNYLKRHEGNDVNKGNTSSSNPFDKVAQEFGMSQSDPAVSSSQQASSTVHILS
LLLRLRQCCCHLSLLKKTLDTSELQGDGIVLSLEEQLSALSLSSSPSPSGPDPKDTVALN
GTRFPSQLFEDTSESTKIAAIVSELKAIRQKDDDQKSVIVSQWTSMLHIVAVHLRRMGLR
YSVIDGTVNPKRRMDLVEEFNTNPKGSQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPAL
EDQACDRIYRVGQRKDVTIHRFVCEETVEEKISTLQGKKKELAQNVLSGTGSTLTKLSLA
DLKIIFGV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagattgtatgtaatgtccacggaagtctgtgtatgttaaaaacgggcgtgaaa
gatggaccaaataaaggcaggagcttctacgtctgcgtggacaagcaaggctgtgatttc
agtcagctggccagcatctcaccatcccactgcctccatcatgaagattcgatggtggaa
ctccaagctctcacatacagtcagcaacagcagagccacaggttattctaccggtgtatt
ataggtaaaaaagccggccagaggtggtgtggaaacgtgccttggactgcaccagacaaa
gaaaggagaaaccctctgtctgacacacagctacagccgtcctgcctgccgcccgtccga
aacccctttaaggcccctgccaagccagacaaggactctgagtggagaaggatgcagtgt
ggtggaggtaatgagaaggtgagagaggagaaagacagtgaggcaagtcataaggctgaa
ggaagaaaaagttctaagaaagaaaatgtggagagtgtaggggcgggagtggaagaggag
gaggaggaaaagaaactgaattcatcggatacataccgaggtaaacaacttccacaaggg
atgaagttaaagaaaagagttacagatgaggagagaaacagtcccaaagccaacagtgtg
gaagaaattaaagataagctgcaagacaagactgaagagaaccacactgagcagggcaaa
acagaaaaagctgattctacctccagcggcaatgctgttaattctgagaaaatggataaa
acctcacaggatcctcacaaggactcgccccagcagccaactactggggaaacttgtctg
gtgaaacaagccgaccctaatgtaaaagagagtgcctctaaatctgagcccggcagcagc
gcccaggctcccagggactcagttaccaccaggacccccacatctaacaaaacaacagag
tcagagtccagtcaaaccaaaaaccaccaagatgacgacagtgacgacgtagtgttggtg
tcagtgaaacctgccactcagaaaactcctcctgtttctgctgtacaaaaaaccctgacc
accttcccaggattccagccagcttctaagctcaaaggtcaacagcgagatcccgaaggc
ctgcacagtctgctcactgctcagcttcaacagaaaaaggccacgctgtctgtggtgaat
gtggcagctctgccagataaaggggagaggctgaggactcaggtcaaggagctggaggaa
gcgctggagtctctgagcctcactgctgcttctcagccagggtcccaggctggatgtagc
agcagtgatgctaatccaggtagcagtcaggtcaacccattcagccgacagggcggcacc
atcctgctccctgcccctccaggccccccttggccccaggcctccggcagctccctgggg
ctcgagctgagccatgggtacacccagatgtatggagcaaacccacagaatcaggcctat
tacggtggcaggatgaccgaggatcgtctgttggtggtgaaaaacgccacctgcgaggcc
atcgaccatctccacaaatctctggagtcctgccccgatgccgaggccgaagccccagac
cccaagggcatcaaggtgtcgctcctggcccatcagaggagagctttggcctggctgctc
tggagggaagcccagaatccctgtggaggaattctggcggatgacatgggtctgggaaaa
accctgaccatgatttctctcatactggccaagaagatcaaggcaaaagaggaagatgaa
aagaaggaagagaagaaactggagaaatggatctccaagactgactccagccttgtggtt
tctaaaggcactctgatcatctgccctgcctccctggttcaccactggaagaaggagatt
gagagacatgtcaaggcaggcaagctgactgtgtacctgtaccacggccccaaccgagag
aaaagggccaaagtgctggcagattatgatgtggtggtgaccacttacagtttggtttct
aaggagattccagtccagaaggaggaggccgacaaacccgccgcggattctgatgatgtg
ccactgcactcggctcctcttttgcgagtggcctgggcccgcgtggttcttgatgaagcc
cacaacatcaaaaacccaaaagtgcagacctccatggccgtctgtcagctgagggctcgc
gctcgctgggcggtcactggtacgcccatccagaataacctgctggacatgtactcactg
ctcaagtttctgcgttgttctccatttgatgagtacaaactctggaaagctcaggtggac
aacggctctaagagaggcagggagaggctgaacatcctgacgaggagtctgctgctccga
cgaaccaaaaaccaaatggactccacaggaaaaccactggtgtctcttcctgatcggacc
tgcgaggtgcatcgactcaaactgtctgaggatgagcaggctgtgtatgatgtggtcttt
gcccaatccagatccactctgcagaactacctgaagagacatgagggaaatgatgtgaac
aaggggaacacctccagttccaatccctttgacaaagtggcccaagagtttggtatgtcg
cagtctgaccctgctgtgtctagttcccagcaggcgtccagcaccgtccacatcctgtcc
ctgttgctgcgcctccgacagtgctgctgccacctgtccctccttaagaagactctcgac
acgtcggagctgcagggtgatgggatcgtcttgtctctggaggagcagctcagcgctctg
tcactgtcctccagcccctcgccatcgggccccgaccctaaagacactgtggcccttaat
ggcacccgcttcccctcacagctgtttgaggacaccagtgagagcaccaagattgctgct
attgtctctgagctgaaggcaatcagacagaaggatgacgatcagaaaagcgtgatcgtg
tcccagtggaccagcatgctgcacattgtagcggttcatctgcggcggatgggcttgaga
tacagcgtcatcgacgggactgtcaaccccaagcgtcgcatggacctggtggaagaattc
aacactaaccctaagggatcacaggtgatgctggtttctctttgtgctggaggggttgga
ctcaacctcattggtgggaatcacctcttcctcattgacatgcactggaatccagccttg
gaggatcaggcctgtgaccgaatctacagagttggacaaaggaaagatgtcaccatccat
aggtttgtgtgtgaagaaacagtggaggagaagatctccacactgcagggaaagaagaag
gagctggcccagaacgtgctgtcaggaacaggaagcaccctcaccaaactctccctggct
gatctcaaaatcatttttggcgtctga
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