Xiphias gladius (swordfish): 120801440
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Entry
120801440 CDS
T07311
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120801440 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120801440 (mid1)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120801440 (mid1)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120801440 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
120801440
NCBI-ProteinID:
XP_040004392
LinkDB
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Position
LG16
Genome browser
AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAIPDSKAMTSASDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKKSSGRFLCVGRDHSHQEA
DQQALDSNLSNLIKRTSELESLMGKLIQTCQHVEANASRQENKLLEECELLINIIQQRRQ
IIATKIKEGKSVRLRKLAQQIASCKQCIERSSALISQADQTLKETDHARFLQTAKSICER
VSMATASSQILLPEINLNDTFDSFALDFTREKKMLESLDYLTAPNPPVIREELCTASYDT
ITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTK
YIFIVKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHS
QDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWIGKNSASWVLS
RCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDSGSLSFYDAVGSQHLYTFDIAFAQPVC
PVFNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctctttgaggaccca
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgtattctggtctcc
cactgcacccccagtgagccaatccagtctatcagcgcctttcagtgcccaacctgtcgc
tatgttatcaccctcaaccagaggggcctagaaggactcaaacgcaacgttacattacag
aacatcattgaccgctaccagaaagcttctctaagtggacctaactctcctaacgagacc
aggcgtgagcgagccatccctgacagcaaagccatgacatccgccagtgaccgggtgcag
tgtcagttctgtgagcaggaccctccacaggatgctgtgaagacctgcgtcacctgcgag
gtgtcatactgcgacgagtgtcttaaggccacccaccccaacaagaagcccttcacgggc
caccgactaatcgagcccttgctggattcccatctgcgagggcttatgtgtctggagcat
gaggacgagaaggtcaacatgtactgtgtgacagacgaacagttgatctgtgcattgtgt
aagctggttggccgacaccgagaccaccaagtagcagccctcagcgaccgatatgacaaa
cttaagaaatcttctggccgctttctctgtgtggggcgtgatcattcacaccaggaggca
gaccagcaagcattggattccaacctcagcaatctaatcaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgccaacacgtggaggcaaatgcatcgcgacaa
gaaaacaagctgcttgaggagtgtgaactgctgattaatatcatacagcagcgaagacaa
atcatagctaccaagataaaggagggaaagtctgtgcgactgagaaagctagcccagcag
atagccagctgcaaacagtgcatcgagaggtcctccgccctcatctctcaagccgaccaa
accctcaaagagacagaccatgctcgattccttcagacagctaaaagtatctgtgagaga
gtatcaatggcaacggcatcctctcaaatcctgttaccagaaatcaatctgaatgacact
tttgatagttttgctttggacttcacgagggagaagaaaatgctagaaagcttggattac
ctcacagcaccaaatccaccagtaatccgcgaggaattatgtacagcttcatatgacaca
atcacagttcactggacatcagatgatgaattctctgttgtatcatatgaacttcaatac
gccatcttcaccagccaatctaatgttgtcagtttatgtaactctgctgatagctggatg
attgtaccaaacatcaagcaaaatcactacactgtgcacggactccagtgtggtacaaag
tacattttcatagtgaaggccattaaccaggctggaaaccgcagcagtgaaccagggaaa
ctcaagacaaacagtcagccatttaagttggacccaaagtccgctcaccggaagttgagg
gtgtcccatgacaacctgacagtggagagggacgagacatcgtccaagaaaagccacagt
caggaccgcttctccagccacagcagttatggcgtcacaggaaatgtctacatcgacagc
ggccgccattactgggaggctctgataggaggaagcacatggtttgcagtgggcattgcg
tacaagtcagcgccaaaacatgagtggattggcaaaaactcagcctcctgggtactgtct
cgctgcaacaactcgtgggtggtgcgtcacaacagcaaggagatgcctattgagccctcg
ccccacctgcggcgtcttggagtattgttggactacgattctggatctctgtctttctac
gatgccgtgggctctcagcacttgtatacgtttgacatcgcctttgctcagccagtttgc
cctgtgttcaatgtgtggaacaggtgtttaacagtcctcacgggactgcccatcccagat
cacctagaggggacagattacaacaactga
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