Xiphias gladius (swordfish): 120801504
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Entry
120801504 CDS
T07311
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120801504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120801504
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120801504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
120801504
NCBI-ProteinID:
XP_040004533
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Position
LG16:4546003..4551849
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AA seq
299 aa
AA seq
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MLATGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSC
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGIPLAPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgacgggagcagctgtaactaatgtcacagccctggcccaggtggaccgggag
aagatctaccaatggatcaatgaattgtccagcccagaaaccagagaaaatgccttgctg
gaactaagcaagaaacgtgaatctgtgccagaccttgctccgatgctctggcactcttgt
ggcaccattgctgctctgttgcaagagatagtgaacatctatccatctataaatccaccc
acacttacagctcaccagtctaacagggtgtgcaacgccctggcacttctgcagtgcgtc
gcctcgcaccctgagacacggtctgcttttcttgctgctcacatcccacttttcctttat
ccttttctgcacactgtgagcaaaacacggccgtttgagtaccttcgactcaccagcctt
ggagttataggtgccttggtcaaaacagatgaacaagaagtgattaacttcctcctcacc
actgaaatcatcccactgtgtctccgtatcatggaatcaggcagtgaactctctaagacg
gttgctactttcatactacagaagattctgttggatgacacagggctcgcctacatatgt
cagacttatgagcgtttctcccatgtggccatgatccttggcaaaatggtgttgcagctc
tcgaaagaaccatcagcacgtctgctgaagcatgttgttcgctgctaccttcgcctctca
gataatctcagagccagagaagccctgcgtcagtgtttgccagaccagctgaaagacagc
acctttgcccaggtgctgaaggacgacaccaccaccaagcgctggctagcacagttggtc
aagaacctgcaggagggccaagtcactgatgctagaggcatcccattggctccacagtga
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