Xiphias gladius (swordfish): 120801570
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Entry
120801570 CDS
T07311
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120801570 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120801570 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120801570 (tra2b)
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120801570 (tra2b)
Spliceosome [BR:
xgl03041
]
Common components
Common spliceosomal components
SR proteins
120801570 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
120801570
NCBI-ProteinID:
XP_040004646
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All DBs
Position
LG16:complement(12823783..12830040)
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AA seq
280 aa
AA seq
DB search
MSDNDKGRESRSASKSVSPRGSGKSASRSPARTPARSKEGSRHSCSKSRSRSRSKSGSHS
HRGSRRHYSRSRSRSRSYHHRSRSRSYSGERRRRSHSRSPMSNRRRHIGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENTDDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGPSAPRRYSRDYDRGYDRGYDRGG
YDRYDDRDYYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacgacaaaggtcgggagtctcgctctgcatccaagagcgtgagtccacgg
ggctcagggaagtcagcaagccgctccccggctcgcacaccagcccgttcaaaagaaggc
tcccgccactcctgctccaaatctcggtcccggtcaaggtcaaaatctgggtcccattcc
catcgtggttcacgtagacactacagccgatctcgttcccgctcaaggtcctatcatcac
cgatctcgtagtaggtcctacagtggagagcgtcggcgcaggagccatagccgctcaccc
atgtccaatcgtcgcaggcatatcggcaaccgtgcgaatccagacccaaactgctgcctg
ggagtgtttggcctgagcttgtacaccacagagagggatctgagggaggtcttctctaaa
tacggccccctggcagatgtatgtatcgtgtatgaccagcagtcgaggcgctccaggggc
tttgcctttgtttacttcgagaacacagatgacgctaaagaggcaaaggaacgagcaaat
ggaatggagttggatggtcgtaggatcagggtagacttctccatcacaaaaagacctcac
accccaacccccggaatctacatgggccgacccacgtatggtggaggtggtcccagtgct
cctcgacgatattcacgcgactatgaccgtgggtatgatcgcgggtacgacagaggcggc
tatgatcgctatgacgacagggactactacagatcatacagaagacgatctccatcacca
tactacagaggggcttacaggtctcggtccagatcaaggtcttattctccccgtcgctat
tga
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