Xiphias gladius (swordfish): 120801705
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Entry
120801705 CDS
T07311
Symbol
hnrnpa3
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120801705 (hnrnpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120801705 (hnrnpa3)
03041 Spliceosome [BR:
xgl03041
]
120801705 (hnrnpa3)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120801705 (hnrnpa3)
mRNA cycle factors
Common to processing body (P body) and stress granule
120801705 (hnrnpa3)
Spliceosome [BR:
xgl03041
]
Common components
Common spliceosomal components
hnRNP proteins
120801705 (hnrnpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
DUF3310
Motif
Other DBs
NCBI-GeneID:
120801705
NCBI-ProteinID:
XP_040004823
LinkDB
All DBs
Position
LG16:15273177..15279730
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AA seq
350 aa
AA seq
DB search
MTHSDPRLWSTKIGKMEDREAKEPEQLRKLFIGGLSFETTEESLRAHFEQWGTLTDCVVM
RDPNSKRSRGFGFVTYSSVREVDDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKK
IFVGGIKEDTEEYHIREHFEKYGKIECIDIMEERSTGKKRGFCFVSFDDHDTVDKIVAQK
FHTINFHNCEVRKALSKQEMSAISSNRGRSGGSGNFMGRGSNFGGGGNFGRGGYGGGRGG
YGDDFDNGPGGNYGGGPGYGGGRGGYGGGGPGYGNQGGGFGGSCDGGYGGNDGGYGGGGN
YNDFGSYGGQQSNYGPMKGNNFGGRNSGGPYGGGYGSGGGGGGGYGSRRY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacccactcggatccgcgcctgtggtcaacgaaaatcggcaaaatggaggatcgtgaa
gctaaggaacctgagcagctcagaaagctatttattggaggtctgagctttgaaaccacg
gaggagagtttacgggcccattttgaacaatggggaaccctcacggactgtgtggtgatg
agggaccccaacagcaagcgctcaagagggtttggctttgtaacgtactcctctgtaagg
gaagtcgatgatgccatgaaggcaaggcctcataaagtagatggccgagttgttgaaccc
aagagggccgtgtccagagaggactccaataaaccaggtgcccatctgacagtgaagaag
atctttgttggtggaatcaaggaagacaccgaggagtaccacatcagggaacattttgag
aaatatggaaagattgaatgcattgatatcatggaggaacgctccactgggaagaagaga
ggattctgctttgtctccttcgatgaccatgacactgtagacaaaattgttgcccaaaaa
ttccacacaatcaacttccataattgtgaggtcaggaaagctctctcaaaacaggaaatg
agtgccatatccagtaacaggggtaggagtggaggatctggaaacttcatgggcagaggt
agtaattttggaggtggaggcaactttggccgaggtggctatggcggaggaagaggtggt
tatggggatgattttgacaatggtcccggaggaaattacggtggaggaccaggttatgga
ggaggccgagggggctacggaggtggtggtccggggtacggcaaccagggaggtggattt
ggtggcagctgcgatggaggttacggaggtaatgacggaggttatggagggggtggaaat
tacaatgacttcggaagttatggtggacagcagtcaaactacgggcccatgaagggaaac
aactttggtggcagaaactcgggtggaccctatggcggtggctatggttctggtggcggc
ggcggaggtggctacggctcgcggcgatattaa
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