Xiphias gladius (swordfish): 120801726
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Entry
120801726 CDS
T07311
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xgl03037
]
120801726 (ift88)
Cilium and associated proteins [BR:
xgl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120801726 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_7
CFAP70_TPR_C
TPR_16
TPR_11
ANAPC3
TPR_9
RMD1-3
SNAP
DUF6340
ARM_TT21_5th
TPR_17
TPR_10
TPR_YpiA_C
TPR_CcmH_CycH
ARM_TT21_4th
TPR_SusR
TPR-S
ARM_TT21_C
DUF2225
CFAP70_mid_TPR
ARM_TT21
MIT
TTC22_N
ARM_TT21_2nd
HAT_PRP39_C
Consortin_N
TPR_Psidin_N
RNPP_C
SHPRH_helical-1st
FumaraseC_C
SUCH1_C
MYCBP_helical
Motif
Other DBs
NCBI-GeneID:
120801726
NCBI-ProteinID:
XP_040004865
LinkDB
All DBs
Position
LG16
Genome browser
AA seq
839 aa
AA seq
DB search
MENVHLALEEEDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAIGA
RPLASSFGSRIPMTSSVGRPMTGAVQDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSRGP
APPLEAMNEDTPEEKIKILEKKVNDLIEESCMAQSMGALQLALEKAKEAGRKERALVRQR
EQSGNADHINLDLTYSVLLNLANQYANNEMYPEALNSYQVIVKNKMFSNAGRLKVNMANI
YFKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFVRMGQYSDAITSFEHIMSES
PNIKTGFNLILCYYAIGDRERMKKAFQKLISVPPGIDDEDKYIPSNDDTSTNMVIEAIKN
DKLHQMERDLKVLAERYIMTAAKLIAPSIETSFAAGFDWCVDMVKSSQYVELANDLEINK
AITYLRQKDFNQVEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMNA
DRYNPAALINKGNTVFAKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLDRLEEALD
CFLKLHAILRNSAQVMYQLAHLYELLEDPQQAIEWLMQVISVTPTDPQALAKLGELHDGE
GDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAILYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEIQEYATKLKKVEKM
KEIKEQRVKSGREGSARGRREGREGSAGISTPVFTSPKKASIMDSSNSSNSTKGERLSAK
MRSLPASSEPYEASSPKELDASYVDPLGPQMERPKTGAKKRVEDDDFADEELGDDLLPE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtgcatctggctctagaggaggaggatctttattcgggttacaacgactat
aatccaacatttgactccgaggagttggagaatgatgtgggcttccagcaagcagtgagg
acaagtcatggaagaagacccccgatgactgccaaatttcccggcactgccattggagct
cggcctttagcttcttcctttggatctcggatccctatgacctcttcagtgggcagaccc
atgactggagctgtgcaggatggagccgcccgaccaatgactgctgttagagcagcaggc
tacacctcctccctgacccgtggctcgacctttgaccctctaggccagtccagaggccct
gcacctccacttgaagcaatgaatgaggacacgcctgaggagaagatcaagatcctggag
aagaaagtgaatgacctgatagaagagagctgtatggcgcagagcatgggagccttacaa
ctggctcttgaaaaagccaaagaggcagggaggaaggagagagcgctggtgagacagagg
gaacagtctggcaatgcagaccacatcaatttagacctcacctactcagttttgctcaac
cttgccaaccagtatgcgaacaacgaaatgtacccagaggccctaaacagctaccaggtc
attgtgaagaacaagatgttcagtaatgcaggcagactgaaagtaaacatggccaacatt
tacttcaaacagaaaaactaccccaaagccatcaagttctaccgaatggcactggatcag
atctccaatgctcacaaggaaatgaggatcaagatcatgcagaatatcggcgttgtcttt
gtccgcatgggccaatactctgatgccataacgtctttcgaacacattatgagtgagagc
cccaacatcaagacgggcttcaacctcatcctgtgctactacgccatcggtgatagggag
aggatgaagaaggcctttcagaagctcatttcggtccctccgggcattgatgatgaagac
aagtacatcccatctaatgatgacaccagtacaaatatggtcatcgaggccattaagaat
gacaagcttcaccagatggagagagatctaaaagtcctggctgagaggtacatcatgact
gcagccaagctcatcgctccgagtattgagacttcttttgctgctggatttgactggtgt
gtggacatggtgaagagttctcagtatgttgagcttgccaacgatctagagatcaacaaa
gccatcacctatctcagacagaaggacttcaaccaggttgaggcagttgaaaccctgaaa
acatttgagaagaaggacagcagagtgaagagcgctgcagccaccaacctctccttcctc
tacttcctggagaaggactatgaccaggctgaccgatacgctgatctcgccatgaacgct
gatcgctacaacccagcagcacttatcaacaagggcaacactgtgtttgccaaacaagac
tatgaaaaggctgcagagttctacaaagaagcacttaggaatgattcctcctgcactgag
gccctctacaacctgggtctaacatataagaaactggatcgtctggaggaggctctggac
tgcttcctgaagctccacgccattctgaggaacagtgcccaagtcatgtaccagctggcc
cacctctatgagcttctggaggatccccagcaggcaatcgagtggttgatgcaggtcatc
agtgtaaccccaactgacccccaggcactggccaaactgggagagctgcatgatggcgag
ggggacaagtcccaggctttccagtactactacgagtccttcaggtacttcccttcaaac
atcgatgtgattgagtggctcggggcgtactacatcgagactcagttctgtgaaaaggcc
attctgtactttgaaagagccacacttatacaaccaacacaggtgaagtggcagctaatg
gtagcaagctgctacagaagaagtggaaactaccagaaagctctggaaacatataaagac
atccatcgcaagtttccagaaaacgtagaatgtctgcgtttcttggtgaggctgtgcaca
gacatgggattgaaggaaatccaagaatatgccaccaagctgaagaaggtggagaagatg
aaggagatcaaagaacagagggtgaagtcggggcgggagggcagtgccagaggtcggaga
gaaggcagagaggggagtgctggcatctccacacctgtcttcacctctcctaagaaggcc
agcattatggacagcagcaacagcagcaacagcactaaaggagaacgtctgagcgccaag
atgaggtcacttcctgcctccagtgagccgtacgaggccagcagcccaaaggaactagac
gcgtcctatgtggaccccctgggacctcagatggagagaccaaagacgggagccaagaag
cgcgtggaggacgacgactttgcggatgaagagctgggagacgacctgctgccggagtag
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integrated database retrieval system
